RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 H3BRN7 92 aa5.69□□□□□ -1.5
TRIM6-202ENST00000380097 IGLV2-23P01705 113 aa5.69□□□□□ -1.5
TRIM6-202ENST00000380097 SLC25A16P16260 332 aa5.69□□□□□ -1.5
TRIM6-202ENST00000380097 SRD5A1P18405 259 aa5.69□□□□□ -1.5
TRIM6-202ENST00000380097 C9orf106Q8NAJ2 232 aa5.69□□□□□ -1.5
TRIM6-202ENST00000380097 LINC01619G3V211 115 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 NHLRC4P0CG21 123 aaPredicted RBP5.68□□□□□ -1.5
TRIM6-202ENST00000380097 EMP1P54849 157 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 HERVK_113P61574 105 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 SPANXN1Q5VSR9 72 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 C1orf162Q8NEQ5 155 aaPredicted RBP5.68□□□□□ -1.5
TRIM6-202ENST00000380097 PIMREGQ9BSJ6 248 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 S4R3C0 116 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 PKD1L2Q7Z442 2459 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 TACC2O95359 2948 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 TRAV8-4A0A0B4J246 113 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 TRAV26-2A0A0B4J265 109 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 TRAV17A0A0B4J275 112 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 IGKV1-17P01599 117 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 THBDP07204 575 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 MFAP4P55083 255 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 PDE6HQ13956 83 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 PVRIGQ6DKI7 326 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 NOTCH2Q04721 2471 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 IGLC6P0CF74 106 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 CCL8P80075 99 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 TMEM155Q4W5P6 130 aa5.68□□□□□ -1.5
TRIM6-202ENST00000380097 ZNF80P51504 273 aaPredicted RBP5.67□□□□□ -1.5
TRIM6-202ENST00000380097 UBE2D3P61077 147 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 UBE2D2P62837 147 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 PRB3Q04118 309 aaPredicted RBP5.67□□□□□ -1.5
TRIM6-202ENST00000380097 MSMPQ1L6U9 139 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 TMEM200BQ69YZ2 307 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 IGFL4Q6B9Z1 124 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 NDUFA11Q86Y39 141 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 NTN5Q8WTR8 489 aaPredicted RBP5.67□□□□□ -1.5
TRIM6-202ENST00000380097 CITED2Q99967 270 aaPredicted RBP5.67□□□□□ -1.5
TRIM6-202ENST00000380097 LINC00574Q9H8X3 128 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 NDUFB3O43676 98 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 CNTFRP26992 372 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 PRR30Q53SZ7 412 aaPredicted RBP5.67□□□□□ -1.5
TRIM6-202ENST00000380097 ZNF491Q8N8L2 437 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 C15orf53Q8NAA6 179 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 KLHL30-AS1Q8NEE0 82 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 OR10J6PQ8NGY7 276 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 AJUBAQ96IF1 538 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 SIGLEC9Q9Y336 463 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 CSPG4Q6UVK1 2322 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 MYO18BQ8IUG5 2567 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 SMIM9A6NGZ8 99 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 UBE2D1P51668 147 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 FAM27E3Q08E93 113 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 ORMDL2Q53FV1 153 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 PRO1854Q9UHT4 67 aa5.67□□□□□ -1.5
TRIM6-202ENST00000380097 TRAV12-1A0A0B4J245 112 aa5.66□□□□□ -1.5
TRIM6-202ENST00000380097 IGLV1-44P01699 117 aa5.66□□□□□ -1.5
TRIM6-202ENST00000380097 C10orf126Q8N4M7 172 aa5.66□□□□□ -1.5
TRIM6-202ENST00000380097 PLEKHB2Q96CS7 222 aa5.66□□□□□ -1.5
TRIM6-202ENST00000380097 LINC01546A6NGU7 62 aa5.66□□□□□ -1.5
TRIM6-202ENST00000380097 CRLF1O75462 422 aa5.66□□□□□ -1.5
TRIM6-202ENST00000380097 HES1Q14469 280 aa5.66□□□□□ -1.5
TRIM6-202ENST00000380097 MDS2Q8NDY4 140 aa5.66□□□□□ -1.5
TRIM6-202ENST00000380097 BEX4Q9NWD9 120 aaPredicted RBP5.66□□□□□ -1.5
TRIM6-202ENST00000380097 TRAV2A0A0B4J234 112 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 CENPVL3A0A0U1RRI6 287 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 LOC107984640A0A0U1RRK4 108 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 I3L2K1 104 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 IGHV1-46P01743 117 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 TRGV3P03979 118 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 CD40P25942 277 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 LY6DQ14210 128 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 CREBBPQ92793 2442 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 PCSK5Q92824 1860 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 IGHV4-39P01824 125 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 HLA-DMBP28068 263 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 NRGNQ92686 78 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 MALRD1Q5VYJ5 2156 aa5.65□□□□□ -1.5
TRIM6-202ENST00000380097 ASH1LQ9NR48 2969 aaKnown RBP5.65□□□□□ -1.51
TRIM6-202ENST00000380097 DSCAML1Q8TD84 2053 aa5.65□□□□□ -1.51
TRIM6-202ENST00000380097 GATA4P43694 442 aa5.65□□□□□ -1.51
TRIM6-202ENST00000380097 C3orf36Q3SXR2 165 aa5.65□□□□□ -1.51
TRIM6-202ENST00000380097 TRPT1Q86TN4 253 aaKnown RBP5.65□□□□□ -1.51
TRIM6-202ENST00000380097 CCL17Q92583 94 aa5.65□□□□□ -1.51
TRIM6-202ENST00000380097 TIMD4Q96H15 378 aa5.65□□□□□ -1.51
TRIM6-202ENST00000380097 ERCC8Q13216 396 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 TMEM170BQ5T4T1 132 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 Q6ZQT7 251 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 Q8N1Y9 231 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 SMIM2Q9BVW6 85 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 TMEM126AQ9H061 195 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 LRBAP50851 2863 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 IGLV2-18A0A075B6J9 118 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 CD7P09564 240 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 LINC00694P0DN24 101 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 OR13C6PQ8NH95 151 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 CTSZQ9UBR2 303 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 SLC25A15Q9Y619 301 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 SPENQ96T58 3664 aaKnown RBP5.64□□□□□ -1.51
TRIM6-202ENST00000380097 TLN2Q9Y4G6 2542 aa5.64□□□□□ -1.51
TRIM6-202ENST00000380097 CFC1BP0CG36 223 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms