RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 VGLL1Q99990 258 aa14.77□□□□□ -0.04
SSU72-204ENST00000378726 DAZ1Q9NQZ3 744 aaKnown RBP14.77□□□□□ -0.05
SSU72-204ENST00000378726 AP5S1Q9NUS5 200 aa14.77□□□□□ -0.05
SSU72-204ENST00000378726 MUC21A0A0G2JKD1 596 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 IGHV7-4-1A0A0J9YVY3 117 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 MUC21A0A140T8X8 626 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 PRAC2D3DTV9 90 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 NCR2O95944 276 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 MUC21Q5SSG8 566 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 DEFB125Q8N687 156 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 MYOZ3Q8TDC0 251 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 UBE2E2Q96LR5 201 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 RHPN1-AS1Q9BWJ2 59 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 CST9LQ9H4G1 147 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 DNAJC9-AS1A6NH13 148 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 FBLL1A6NHQ2 334 aaKnown RBP14.76□□□□□ -0.05
SSU72-204ENST00000378726 K7EMT4 169 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 OCIAD2Q56VL3 154 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 C12orf54Q6X4T0 127 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 RNF152Q8N8N0 203 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 C16orf92Q96LL3 132 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 VPS25Q9BRG1 176 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 ZNF747Q9BV97 191 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 MS4A6AQ9H2W1 248 aa14.76□□□□□ -0.05
SSU72-204ENST00000378726 MYO9AB2RTY4 2548 aa14.75□□□□□ -0.05
SSU72-204ENST00000378726 LGALS1P09382 135 aaKnown RBP14.74□□□□□ -0.05
SSU72-204ENST00000378726 FA2HQ7L5A8 372 aa14.74□□□□□ -0.05
SSU72-204ENST00000378726 PRSS3P2Q8NHM4 247 aa14.74□□□□□ -0.05
SSU72-204ENST00000378726 PRR25Q96S07 402 aa14.74□□□□□ -0.05
SSU72-204ENST00000378726 SMPXQ9UHP9 88 aa14.74□□□□□ -0.05
SSU72-204ENST00000378726 RPL11P62913 178 aaKnown RBP14.74□□□□□ -0.05
SSU72-204ENST00000378726 ESM1Q9NQ30 184 aa14.74□□□□□ -0.05
SSU72-204ENST00000378726 IFI27P40305 119 aaPredicted RBP14.73□□□□□ -0.05
SSU72-204ENST00000378726 ERCC8Q13216 396 aa14.73□□□□□ -0.05
SSU72-204ENST00000378726 NOTCH2Q04721 2471 aa14.73□□□□□ -0.05
SSU72-204ENST00000378726 TMSB15BA0A087X1C1 80 aa14.73□□□□□ -0.05
SSU72-204ENST00000378726 CBY3A6NI87 242 aa14.73□□□□□ -0.05
SSU72-204ENST00000378726 CT45A10P0DMU9 189 aa14.73□□□□□ -0.05
SSU72-204ENST00000378726 Q6ZSV7 163 aa14.73□□□□□ -0.05
SSU72-204ENST00000378726 Q8TAT8 98 aa14.73□□□□□ -0.05
SSU72-204ENST00000378726 UFC1Q9Y3C8 167 aa14.73□□□□□ -0.05
SSU72-204ENST00000378726 LOC389332A0A1B0GUA5 103 aa14.72□□□□□ -0.05
SSU72-204ENST00000378726 A0A1B0GW15 77 aa14.72□□□□□ -0.05
SSU72-204ENST00000378726 EDN2P20800 178 aa14.72□□□□□ -0.05
SSU72-204ENST00000378726 A0A096LNJ9 63 aa14.72□□□□□ -0.05
SSU72-204ENST00000378726 TMEM213A2RRL7 107 aa14.72□□□□□ -0.05
SSU72-204ENST00000378726 RBAKDNA6NC62 111 aa14.72□□□□□ -0.05
SSU72-204ENST00000378726 SNAI2O43623 268 aa14.72□□□□□ -0.05
SSU72-204ENST00000378726 LYZL1Q6UWQ5 148 aa14.72□□□□□ -0.05
SSU72-204ENST00000378726 OR10AG1Q8NH19 301 aa14.72□□□□□ -0.05
SSU72-204ENST00000378726 MRPL53Q96EL3 112 aaKnown RBP14.72□□□□□ -0.05
SSU72-204ENST00000378726 ANK3Q12955 4377 aaKnown RBP14.71□□□□□ -0.05
SSU72-204ENST00000378726 IGHV4OR15-8A0A075B7B6 117 aa14.71□□□□□ -0.05
SSU72-204ENST00000378726 A0A087WW49 117 aa14.71□□□□□ -0.05
SSU72-204ENST00000378726 D6R8Y8 96 aa14.71□□□□□ -0.05
SSU72-204ENST00000378726 HIST1H1AQ02539 215 aaPredicted RBP14.71□□□□□ -0.05
SSU72-204ENST00000378726 AMMECR1LQ6DCA0 310 aa14.71□□□□□ -0.05
SSU72-204ENST00000378726 ZNF493Q6ZR52 646 aa14.71□□□□□ -0.05
SSU72-204ENST00000378726 COX8CQ7Z4L0 72 aa14.71□□□□□ -0.05
SSU72-204ENST00000378726 SMR3AQ99954 134 aa14.71□□□□□ -0.05
SSU72-204ENST00000378726 SELENOKQ9Y6D0 94 aa14.71□□□□□ -0.05
SSU72-204ENST00000378726 IGKV3-7A0A075B6H7 116 aa14.7□□□□□ -0.06
SSU72-204ENST00000378726 COX8AP10176 69 aa14.7□□□□□ -0.06
SSU72-204ENST00000378726 Q6AWC8 147 aa14.7□□□□□ -0.06
SSU72-204ENST00000378726 C2orf91Q6ZV80 131 aa14.7□□□□□ -0.06
SSU72-204ENST00000378726 SIGLEC8Q9NYZ4 499 aa14.7□□□□□ -0.06
SSU72-204ENST00000378726 AMN1Q8IY45 258 aa14.69□□□□□ -0.06
SSU72-204ENST00000378726 OR8A1Q8NGG7 326 aa14.69□□□□□ -0.06
SSU72-204ENST00000378726 C20orf173Q96LM9 149 aa14.69□□□□□ -0.06
SSU72-204ENST00000378726 AGPAT4-IT1Q9H0P7 198 aa14.69□□□□□ -0.06
SSU72-204ENST00000378726 TMEM189A5PLL7 270 aa14.69□□□□□ -0.06
SSU72-204ENST00000378726 SH2D1AO60880 128 aa14.69□□□□□ -0.06
SSU72-204ENST00000378726 SYNJ2BPP57105 145 aa14.69□□□□□ -0.06
SSU72-204ENST00000378726 C18orf65Q6ZTR6 163 aa14.69□□□□□ -0.06
SSU72-204ENST00000378726 SOCS3O14543 225 aa14.68□□□□□ -0.06
SSU72-204ENST00000378726 FXYD7P58549 80 aa14.68□□□□□ -0.06
SSU72-204ENST00000378726 U3KQK5 164 aa14.68□□□□□ -0.06
SSU72-204ENST00000378726 CUBNO60494 3623 aa14.68□□□□□ -0.06
SSU72-204ENST00000378726 HOXD3P31249 432 aaPredicted RBP14.68□□□□□ -0.06
SSU72-204ENST00000378726 SCGB2A2Q13296 93 aa14.68□□□□□ -0.06
SSU72-204ENST00000378726 FAM104BQ5XKR9 115 aa14.68□□□□□ -0.06
SSU72-204ENST00000378726 K7ERU9 68 aa14.67□□□□□ -0.06
SSU72-204ENST00000378726 SRD5A1P18405 259 aa14.67□□□□□ -0.06
SSU72-204ENST00000378726 ZNF80P51504 273 aaPredicted RBP14.67□□□□□ -0.06
SSU72-204ENST00000378726 TCTEX1D4Q5JR98 221 aa14.67□□□□□ -0.06
SSU72-204ENST00000378726 TMEM78Q5T7P6 136 aa14.67□□□□□ -0.06
SSU72-204ENST00000378726 PRELID3AQ96N28 172 aa14.67□□□□□ -0.06
SSU72-204ENST00000378726 CSTL1Q9H114 145 aa14.66□□□□□ -0.06
SSU72-204ENST00000378726 TMEM160Q9NX00 188 aa14.66□□□□□ -0.06
SSU72-204ENST00000378726 MTORP42345 2549 aa14.66□□□□□ -0.06
SSU72-204ENST00000378726 GAGE12BA1L429 117 aa14.66□□□□□ -0.06
SSU72-204ENST00000378726 LGALS9O00182 355 aa14.66□□□□□ -0.06
SSU72-204ENST00000378726 C9orf47Q6ZRZ4 202 aa14.66□□□□□ -0.06
SSU72-204ENST00000378726 FGF6P10767 208 aa14.65□□□□□ -0.06
SSU72-204ENST00000378726 BMI1P35226 326 aa14.65□□□□□ -0.06
SSU72-204ENST00000378726 DEFB136Q30KP8 78 aa14.65□□□□□ -0.06
SSU72-204ENST00000378726 MRPL51Q4U2R6 128 aaKnown RBP14.65□□□□□ -0.06
SSU72-204ENST00000378726 NF1P21359 2839 aa14.65□□□□□ -0.06
SSU72-204ENST00000378726 ORMDL3Q8N138 153 aa14.65□□□□□ -0.06
SSU72-204ENST00000378726 TRAV8-6A0A0B4J262 113 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms