RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 CHCHD1Q96BP2 118 aaKnown RBP12.6□□□□□ -0.39
HLA-A-202ENST00000376806 TMEM191AQ9H0A3 160 aa12.6□□□□□ -0.39
HLA-A-202ENST00000376806 TMEM160Q9NX00 188 aa12.6□□□□□ -0.39
HLA-A-202ENST00000376806 MSRB1Q9NZV6 116 aa12.6□□□□□ -0.39
HLA-A-202ENST00000376806 TEP1Q99973 2627 aaKnown RBP12.6□□□□□ -0.39
HLA-A-202ENST00000376806 MRPL51Q4U2R6 128 aaKnown RBP12.59□□□□□ -0.39
HLA-A-202ENST00000376806 DUX3Q96PT4 197 aa12.59□□□□□ -0.39
HLA-A-202ENST00000376806 U3KQK5 164 aa12.59□□□□□ -0.39
HLA-A-202ENST00000376806 NSD1Q96L73 2696 aaPredicted RBP12.59□□□□□ -0.39
HLA-A-202ENST00000376806 D6R8Y8 96 aa12.59□□□□□ -0.39
HLA-A-202ENST00000376806 M0R2Z0 102 aa12.59□□□□□ -0.39
HLA-A-202ENST00000376806 SNAI2O43623 268 aa12.59□□□□□ -0.39
HLA-A-202ENST00000376806 DMRTA1Q5VZB9 504 aa12.59□□□□□ -0.39
HLA-A-202ENST00000376806 PEMTQ9UBM1 199 aa12.59□□□□□ -0.39
HLA-A-202ENST00000376806 KLLNB2CW77 178 aa12.58□□□□□ -0.4
HLA-A-202ENST00000376806 OR5AL1P0C617 328 aa12.58□□□□□ -0.4
HLA-A-202ENST00000376806 RNASE4P34096 147 aaKnown RBP12.58□□□□□ -0.4
HLA-A-202ENST00000376806 KRTDAPP60985 99 aa12.58□□□□□ -0.4
HLA-A-202ENST00000376806 KIR3DS1Q14943 382 aa12.58□□□□□ -0.4
HLA-A-202ENST00000376806 HIST2H2BDQ6DRA6 164 aa12.58□□□□□ -0.4
HLA-A-202ENST00000376806 OR9G4Q8NGQ1 327 aa12.58□□□□□ -0.4
HLA-A-202ENST00000376806 OR10AG1Q8NH19 301 aa12.58□□□□□ -0.4
HLA-A-202ENST00000376806 WFDC12Q8WWY7 111 aa12.58□□□□□ -0.4
HLA-A-202ENST00000376806 A0A0J9YX75 114 aa12.57□□□□□ -0.4
HLA-A-202ENST00000376806 LINC00587B1AMM8 73 aa12.57□□□□□ -0.4
HLA-A-202ENST00000376806 H3BVH4 76 aa12.57□□□□□ -0.4
HLA-A-202ENST00000376806 ORMDL3Q8N138 153 aa12.57□□□□□ -0.4
HLA-A-202ENST00000376806 ODF3Q96PU9 254 aa12.57□□□□□ -0.4
HLA-A-202ENST00000376806 FN1P02751 2386 aaKnown RBP12.57□□□□□ -0.4
HLA-A-202ENST00000376806 CSN3P07498 182 aa12.57□□□□□ -0.4
HLA-A-202ENST00000376806 LINC00614P0C842 121 aa12.57□□□□□ -0.4
HLA-A-202ENST00000376806 PKIAP61925 76 aa12.57□□□□□ -0.4
HLA-A-202ENST00000376806 PRELID3AQ96N28 172 aa12.57□□□□□ -0.4
HLA-A-202ENST00000376806 ANXA2RQ3ZCQ2 193 aa12.56□□□□□ -0.4
HLA-A-202ENST00000376806 ZNF418Q8TF45 676 aaPredicted RBP12.56□□□□□ -0.4
HLA-A-202ENST00000376806 DLX4Q92988 240 aaPredicted RBP12.56□□□□□ -0.4
HLA-A-202ENST00000376806 RNF185Q96GF1 192 aa12.56□□□□□ -0.4
HLA-A-202ENST00000376806 C16orf95Q9H693 158 aa12.56□□□□□ -0.4
HLA-A-202ENST00000376806 IGHV1-24A0A0C4DH33 117 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 INAFM1C9JVW0 142 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 C3orf79P0CE67 100 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 LEPP41159 167 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 HILS1P60008 231 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 CACNG7P62955 275 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 PRO1933Q9H354 126 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 IGHV4-4A0A075B6R2 117 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 TSTD3H0UI37 97 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 CD28P10747 220 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 PMCHL1Q16048 86 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 EBLN2Q6P2I7 272 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 Q8N976 141 aa12.55□□□□□ -0.4
HLA-A-202ENST00000376806 SMKR1H3BMG3 65 aa12.54□□□□□ -0.4
HLA-A-202ENST00000376806 NCR2O95944 276 aa12.54□□□□□ -0.4
HLA-A-202ENST00000376806 RAB4AP20338 218 aa12.54□□□□□ -0.4
HLA-A-202ENST00000376806 CKS2P33552 79 aa12.54□□□□□ -0.4
HLA-A-202ENST00000376806 ASIPP42127 132 aa12.54□□□□□ -0.4
HLA-A-202ENST00000376806 TEX43Q6ZNM6 134 aa12.54□□□□□ -0.4
HLA-A-202ENST00000376806 ZNF664Q8N3J9 261 aa12.54□□□□□ -0.4
HLA-A-202ENST00000376806 LINC01006Q8NI28 216 aa12.54□□□□□ -0.4
HLA-A-202ENST00000376806 RAX2Q96IS3 184 aa12.54□□□□□ -0.4
HLA-A-202ENST00000376806 MED14OSP0DP75 135 aa12.53□□□□□ -0.4
HLA-A-202ENST00000376806 SPANXN1Q5VSR9 72 aa12.53□□□□□ -0.4
HLA-A-202ENST00000376806 C11orf44Q8N8P7 122 aa12.53□□□□□ -0.4
HLA-A-202ENST00000376806 AGRNO00468 2067 aa12.53□□□□□ -0.4
HLA-A-202ENST00000376806 TRAV2A0A0B4J234 112 aa12.53□□□□□ -0.4
HLA-A-202ENST00000376806 NPYP01303 97 aa12.53□□□□□ -0.4
HLA-A-202ENST00000376806 FHL3Q13643 280 aa12.53□□□□□ -0.4
HLA-A-202ENST00000376806 FOXI2Q6ZQN5 318 aa12.53□□□□□ -0.4
HLA-A-202ENST00000376806 FA2HQ7L5A8 372 aa12.53□□□□□ -0.4
HLA-A-202ENST00000376806 DYNLRB2Q8TF09 96 aa12.53□□□□□ -0.4
HLA-A-202ENST00000376806 TIMM8BQ9Y5J9 83 aaPredicted RBP12.53□□□□□ -0.4
HLA-A-202ENST00000376806 A0A1W2PRX2 142 aa12.52□□□□□ -0.41
HLA-A-202ENST00000376806 C7orf71A4D174 169 aa12.52□□□□□ -0.41
HLA-A-202ENST00000376806 DUSP14O95147 198 aaKnown RBP12.52□□□□□ -0.41
HLA-A-202ENST00000376806 PPBPP02775 128 aa12.52□□□□□ -0.41
HLA-A-202ENST00000376806 S100A4P26447 101 aaKnown RBP12.52□□□□□ -0.41
HLA-A-202ENST00000376806 SMIM15Q7Z3B0 74 aa12.52□□□□□ -0.41
HLA-A-202ENST00000376806 TMEM61Q8N0U2 210 aa12.52□□□□□ -0.41
HLA-A-202ENST00000376806 PRSS3P2Q8NHM4 247 aa12.52□□□□□ -0.41
HLA-A-202ENST00000376806 AP5S1Q9NUS5 200 aa12.52□□□□□ -0.41
HLA-A-202ENST00000376806 SIGLEC8Q9NYZ4 499 aa12.52□□□□□ -0.41
HLA-A-202ENST00000376806 IGKV3-20P01619 116 aa12.51□□□□□ -0.41
HLA-A-202ENST00000376806 IFI27P40305 119 aaPredicted RBP12.51□□□□□ -0.41
HLA-A-202ENST00000376806 NIPBLQ6KC79 2804 aaeCLIP12.51□□□□□ -0.41
HLA-A-202ENST00000376806 EVI2AP22794 236 aa12.51□□□□□ -0.41
HLA-A-202ENST00000376806 CITED2Q99967 270 aaPredicted RBP12.51□□□□□ -0.41
HLA-A-202ENST00000376806 SCRT2Q9NQ03 307 aa12.51□□□□□ -0.41
HLA-A-202ENST00000376806 TRAV12-3A0A0B4J271 114 aa12.5□□□□□ -0.41
HLA-A-202ENST00000376806 LOC389332A0A1B0GUA5 103 aa12.5□□□□□ -0.41
HLA-A-202ENST00000376806 LAMTOR2Q9Y2Q5 125 aa12.5□□□□□ -0.41
HLA-A-202ENST00000376806 TSSC4Q9Y5U2 329 aaPredicted RBP12.5□□□□□ -0.41
HLA-A-202ENST00000376806 KIR2DL5BA0A0G2JN68 375 aa12.49□□□□□ -0.41
HLA-A-202ENST00000376806 KIR2DL5BA0A0G2JPC4 375 aa12.49□□□□□ -0.41
HLA-A-202ENST00000376806 GNRH2O43555 120 aa12.49□□□□□ -0.41
HLA-A-202ENST00000376806 LEPROTL1O95214 131 aa12.49□□□□□ -0.41
HLA-A-202ENST00000376806 RNASE3P12724 160 aaKnown RBP12.49□□□□□ -0.41
HLA-A-202ENST00000376806 TSPOP30536 169 aa12.49□□□□□ -0.41
HLA-A-202ENST00000376806 FAM159AQ6UWV7 190 aa12.49□□□□□ -0.41
HLA-A-202ENST00000376806 KIR2DL5AQ8N109 375 aa12.49□□□□□ -0.41
HLA-A-202ENST00000376806 PHLDA3Q9Y5J5 127 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms