RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 UFC1Q9Y3C8 167 aa16.35■□□□□ 0.21
RNF39-202ENST00000376751 H0Y8G0 127 aa16.34■□□□□ 0.21
RNF39-202ENST00000376751 GATA1P15976 413 aaPredicted RBP16.34■□□□□ 0.21
RNF39-202ENST00000376751 PET117Q6UWS5 81 aa16.34■□□□□ 0.21
RNF39-202ENST00000376751 DCANP1Q8TF63 244 aa16.34■□□□□ 0.21
RNF39-202ENST00000376751 CHD6Q8TD26 2715 aa16.34■□□□□ 0.21
RNF39-202ENST00000376751 EVI2AP22794 236 aa16.33■□□□□ 0.21
RNF39-202ENST00000376751 C20orf202A1L168 122 aa16.33■□□□□ 0.2
RNF39-202ENST00000376751 KLHDC1Q8N7A1 406 aa16.33■□□□□ 0.2
RNF39-202ENST00000376751 ZNF469Q96JG9 3925 aaPredicted RBP16.32■□□□□ 0.2
RNF39-202ENST00000376751 TCF21O43680 179 aa16.32■□□□□ 0.2
RNF39-202ENST00000376751 LGALS1P09382 135 aaKnown RBP16.32■□□□□ 0.2
RNF39-202ENST00000376751 WFDC3Q8IUB2 231 aa16.32■□□□□ 0.2
RNF39-202ENST00000376751 DUX5Q96PT3 197 aa16.32■□□□□ 0.2
RNF39-202ENST00000376751 PMCHL2Q9BQD1 86 aa16.32■□□□□ 0.2
RNF39-202ENST00000376751 IGHV4-4A0A075B6R2 117 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 IGHV4OR15-8A0A075B7B6 117 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 A0A087WW49 117 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 TRAV21A0A0B4J279 112 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 hDV102S1A0JD36 115 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 PPBPP02775 128 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 RNASE4P34096 147 aaKnown RBP16.31■□□□□ 0.2
RNF39-202ENST00000376751 MRPL52Q86TS9 123 aaKnown RBP16.31■□□□□ 0.2
RNF39-202ENST00000376751 APRG1Q8IVJ8 170 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 SPRY2O43597 315 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 TNFRSF6BO95407 300 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 ELANEP08246 267 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 LINC01545Q5VT33 79 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 HIST2H2BCQ6DN03 193 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 Q6ZN92 141 aa16.31■□□□□ 0.2
RNF39-202ENST00000376751 MYO9AB2RTY4 2548 aa16.3■□□□□ 0.2
RNF39-202ENST00000376751 SYNJ2BPP57105 145 aa16.29■□□□□ 0.2
RNF39-202ENST00000376751 ANXA2RQ3ZCQ2 193 aa16.29■□□□□ 0.2
RNF39-202ENST00000376751 SPANXN1Q5VSR9 72 aa16.29■□□□□ 0.2
RNF39-202ENST00000376751 MS4A6AQ9H2W1 248 aa16.29■□□□□ 0.2
RNF39-202ENST00000376751 MAP1LC3AQ9H492 121 aa16.29■□□□□ 0.2
RNF39-202ENST00000376751 CACNG7P62955 275 aa16.29■□□□□ 0.2
RNF39-202ENST00000376751 TP73-AS1Q9UF72 201 aa16.29■□□□□ 0.2
RNF39-202ENST00000376751 TFPI2P48307 235 aa16.28■□□□□ 0.2
RNF39-202ENST00000376751 LAMTOR2Q9Y2Q5 125 aa16.28■□□□□ 0.2
RNF39-202ENST00000376751 TRAV26-2A0A0B4J265 109 aa16.27■□□□□ 0.2
RNF39-202ENST00000376751 HBDP02042 147 aa16.27■□□□□ 0.2
RNF39-202ENST00000376751 ID1P41134 155 aa16.27■□□□□ 0.2
RNF39-202ENST00000376751 HNRNPA3P51991 378 aaKnown RBP16.27■□□□□ 0.2
RNF39-202ENST00000376751 NUTF2P61970 127 aaKnown RBP16.27■□□□□ 0.2
RNF39-202ENST00000376751 RNF152Q8N8N0 203 aa16.27■□□□□ 0.2
RNF39-202ENST00000376751 TRBV7-9A0A0J9YWB2 115 aa16.27■□□□□ 0.19
RNF39-202ENST00000376751 LINC01546A6NGU7 62 aa16.27■□□□□ 0.19
RNF39-202ENST00000376751 SONP18583 2426 aaKnown RBP16.27■□□□□ 0.19
RNF39-202ENST00000376751 CCDC168Q8NDH2 2452 aa16.26■□□□□ 0.19
RNF39-202ENST00000376751 TSPOP30536 169 aa16.26■□□□□ 0.19
RNF39-202ENST00000376751 HOXD3P31249 432 aaPredicted RBP16.26■□□□□ 0.19
RNF39-202ENST00000376751 C18orf65Q6ZTR6 163 aa16.26■□□□□ 0.19
RNF39-202ENST00000376751 UBE2E2Q96LR5 201 aa16.26■□□□□ 0.19
RNF39-202ENST00000376751 ZNF688P0C7X2 276 aa16.26■□□□□ 0.19
RNF39-202ENST00000376751 NRACQ8N912 160 aa16.26■□□□□ 0.19
RNF39-202ENST00000376751 WFDC11Q8NEX6 87 aa16.26■□□□□ 0.19
RNF39-202ENST00000376751 WFDC12Q8WWY7 111 aa16.26■□□□□ 0.19
RNF39-202ENST00000376751 ST20Q9HBF5 79 aa16.26■□□□□ 0.19
RNF39-202ENST00000376751 KLLNB2CW77 178 aa16.25■□□□□ 0.19
RNF39-202ENST00000376751 GNRH2O43555 120 aa16.25■□□□□ 0.19
RNF39-202ENST00000376751 ASIPP42127 132 aa16.25■□□□□ 0.19
RNF39-202ENST00000376751 BATFQ16520 125 aa16.25■□□□□ 0.19
RNF39-202ENST00000376751 SMIM15Q7Z3B0 74 aa16.25■□□□□ 0.19
RNF39-202ENST00000376751 Q8N2B8 174 aa16.25■□□□□ 0.19
RNF39-202ENST00000376751 OR2K2Q8NGT1 345 aa16.25■□□□□ 0.19
RNF39-202ENST00000376751 FLNAP21333 2647 aaKnown RBP16.25■□□□□ 0.19
RNF39-202ENST00000376751 LGALS9O00182 355 aa16.24■□□□□ 0.19
RNF39-202ENST00000376751 SAMD13Q5VXD3 122 aa16.24■□□□□ 0.19
RNF39-202ENST00000376751 IGLV2-18A0A075B6J9 118 aa16.24■□□□□ 0.19
RNF39-202ENST00000376751 PSMG4Q5JS54 123 aa16.24■□□□□ 0.19
RNF39-202ENST00000376751 SCRT2Q9NQ03 307 aa16.24■□□□□ 0.19
RNF39-202ENST00000376751 K7EQG2 157 aa16.23■□□□□ 0.19
RNF39-202ENST00000376751 M0R381 172 aa16.23■□□□□ 0.19
RNF39-202ENST00000376751 NXT2Q9NPJ8 142 aaKnown RBP16.23■□□□□ 0.19
RNF39-202ENST00000376751 AGRNO00468 2067 aa16.23■□□□□ 0.19
RNF39-202ENST00000376751 MUC4Q99102 2169 aa16.22■□□□□ 0.19
RNF39-202ENST00000376751 RNASE3P12724 160 aaKnown RBP16.22■□□□□ 0.19
RNF39-202ENST00000376751 S100A4P26447 101 aaKnown RBP16.22■□□□□ 0.19
RNF39-202ENST00000376751 DEFB136Q30KP8 78 aa16.22■□□□□ 0.19
RNF39-202ENST00000376751 AKAP9Q99996 3911 aa16.22■□□□□ 0.19
RNF39-202ENST00000376751 ADAMTSL5Q6ZMM2 481 aa16.22■□□□□ 0.19
RNF39-202ENST00000376751 LINC00469Q8N7U9 141 aa16.22■□□□□ 0.19
RNF39-202ENST00000376751 SORL1Q92673 2214 aa16.21■□□□□ 0.19
RNF39-202ENST00000376751 MED14OSP0DP75 135 aa16.21■□□□□ 0.19
RNF39-202ENST00000376751 LEPP41159 167 aa16.21■□□□□ 0.19
RNF39-202ENST00000376751 Q8N8P6 123 aa16.21■□□□□ 0.19
RNF39-202ENST00000376751 IFI27L1Q96BM0 104 aa16.21■□□□□ 0.19
RNF39-202ENST00000376751 ZMAT5Q9UDW3 170 aaKnown RBP16.21■□□□□ 0.19
RNF39-202ENST00000376751 SLURP1P55000 103 aa16.2■□□□□ 0.18
RNF39-202ENST00000376751 MRPS16Q9Y3D3 137 aaKnown RBP16.2■□□□□ 0.18
RNF39-202ENST00000376751 A0A0J9YX75 114 aa16.2■□□□□ 0.18
RNF39-202ENST00000376751 PHLDA3Q9Y5J5 127 aa16.2■□□□□ 0.18
RNF39-202ENST00000376751 KMT2BQ9UMN6 2715 aaPredicted RBP16.19■□□□□ 0.18
RNF39-202ENST00000376751 HSBP1L1C9JCN9 74 aa16.19■□□□□ 0.18
RNF39-202ENST00000376751 FCER1GP30273 86 aa16.19■□□□□ 0.18
RNF39-202ENST00000376751 LGALS9BQ3B8N2 356 aa16.18■□□□□ 0.18
RNF39-202ENST00000376751 TCTEX1D4Q5JR98 221 aa16.18■□□□□ 0.18
RNF39-202ENST00000376751 LGALS9CQ6DKI2 356 aa16.18■□□□□ 0.18
RNF39-202ENST00000376751 GOLT1BQ9Y3E0 138 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms