RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 PPP1R27Q86WC6 154 aa9.99□□□□□ -0.81
MSH5-204ENST00000375755 BBC3Q96PG8 261 aaPredicted RBP9.99□□□□□ -0.81
MSH5-204ENST00000375755 DOPEY1Q5JWR5 2465 aa9.99□□□□□ -0.81
MSH5-204ENST00000375755 MT-ATP8P03928 68 aa9.98□□□□□ -0.81
MSH5-204ENST00000375755 FHL3Q13643 280 aa9.98□□□□□ -0.81
MSH5-204ENST00000375755 MORN3Q6PF18 240 aaPredicted RBP9.98□□□□□ -0.81
MSH5-204ENST00000375755 LY6G5BQ8NDX9 201 aa9.98□□□□□ -0.81
MSH5-204ENST00000375755 ZNF418Q8TF45 676 aaPredicted RBP9.98□□□□□ -0.81
MSH5-204ENST00000375755 S4R3C0 116 aa9.98□□□□□ -0.81
MSH5-204ENST00000375755 SPINK8P0C7L1 97 aa9.98□□□□□ -0.81
MSH5-204ENST00000375755 COX8CQ7Z4L0 72 aa9.98□□□□□ -0.81
MSH5-204ENST00000375755 TIMD4Q96H15 378 aa9.98□□□□□ -0.81
MSH5-204ENST00000375755 PSMG3-AS1Q96PY0 264 aa9.98□□□□□ -0.81
MSH5-204ENST00000375755 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
MSH5-204ENST00000375755 C1QTNF4Q9BXJ3 329 aa9.98□□□□□ -0.81
MSH5-204ENST00000375755 ABCA2Q9BZC7 2435 aa9.98□□□□□ -0.81
MSH5-204ENST00000375755 IGLV2-18A0A075B6J9 118 aa9.97□□□□□ -0.81
MSH5-204ENST00000375755 B5MCH6 92 aa9.97□□□□□ -0.81
MSH5-204ENST00000375755 PLGLAQ15195 96 aa9.97□□□□□ -0.81
MSH5-204ENST00000375755 ZNF469Q96JG9 3925 aaPredicted RBP9.97□□□□□ -0.81
MSH5-204ENST00000375755 NDUFA3O95167 84 aa9.97□□□□□ -0.81
MSH5-204ENST00000375755 ORM1P02763 201 aa9.97□□□□□ -0.81
MSH5-204ENST00000375755 Q8N8P6 123 aa9.97□□□□□ -0.81
MSH5-204ENST00000375755 POLQO75417 2590 aa9.97□□□□□ -0.81
MSH5-204ENST00000375755 PDE6HQ13956 83 aa9.96□□□□□ -0.81
MSH5-204ENST00000375755 IGFL4Q6B9Z1 124 aa9.96□□□□□ -0.81
MSH5-204ENST00000375755 DYNAPQ8N1N2 210 aa9.96□□□□□ -0.81
MSH5-204ENST00000375755 GLMPQ8WWB7 406 aa9.96□□□□□ -0.81
MSH5-204ENST00000375755 CYSLTR1Q9Y271 337 aa9.96□□□□□ -0.81
MSH5-204ENST00000375755 TIMM23O14925 209 aa9.96□□□□□ -0.82
MSH5-204ENST00000375755 LINC01559Q495D7 138 aa9.96□□□□□ -0.82
MSH5-204ENST00000375755 CFAP126Q5VTH2 177 aa9.96□□□□□ -0.82
MSH5-204ENST00000375755 RPEQ96AT9 228 aa9.96□□□□□ -0.82
MSH5-204ENST00000375755 FAM208BQ5VWN6 2430 aa9.96□□□□□ -0.82
MSH5-204ENST00000375755 LRRK2Q5S007 2527 aa9.96□□□□□ -0.82
MSH5-204ENST00000375755 LY6LH3BQJ8 138 aa9.96□□□□□ -0.82
MSH5-204ENST00000375755 XGP55808 180 aa9.96□□□□□ -0.82
MSH5-204ENST00000375755 HERV-K104P63124 156 aa9.96□□□□□ -0.82
MSH5-204ENST00000375755 CNFNQ9BYD5 112 aa9.96□□□□□ -0.82
MSH5-204ENST00000375755 BPESC1Q9GZL8 116 aa9.96□□□□□ -0.82
MSH5-204ENST00000375755 KMT2BQ9UMN6 2715 aaPredicted RBP9.95□□□□□ -0.82
MSH5-204ENST00000375755 ZANQ9Y493 2812 aa9.95□□□□□ -0.82
MSH5-204ENST00000375755 A0A087WX48 190 aa9.95□□□□□ -0.82
MSH5-204ENST00000375755 PGPEP1Q9NXJ5 209 aa9.95□□□□□ -0.82
MSH5-204ENST00000375755 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
MSH5-204ENST00000375755 Q6ZUT4 128 aa9.95□□□□□ -0.82
MSH5-204ENST00000375755 MYOZ3Q8TDC0 251 aa9.95□□□□□ -0.82
MSH5-204ENST00000375755 NRGNQ92686 78 aa9.95□□□□□ -0.82
MSH5-204ENST00000375755 NCBP2LA6PVI3 153 aaKnown RBP9.94□□□□□ -0.82
MSH5-204ENST00000375755 EFNA4P52798 201 aa9.94□□□□□ -0.82
MSH5-204ENST00000375755 VMO1Q7Z5L0 202 aa9.94□□□□□ -0.82
MSH5-204ENST00000375755 ATP6V0E2Q8NHE4 81 aa9.94□□□□□ -0.82
MSH5-204ENST00000375755 HOXA3O43365 443 aaPredicted RBP9.94□□□□□ -0.82
MSH5-204ENST00000375755 TSPAN13O95857 204 aa9.94□□□□□ -0.82
MSH5-204ENST00000375755 PTH2Q96A98 100 aa9.94□□□□□ -0.82
MSH5-204ENST00000375755 UBR5O95071 2799 aaPredicted RBP9.93□□□□□ -0.82
MSH5-204ENST00000375755 LINC01548A6NM66 108 aa9.93□□□□□ -0.82
MSH5-204ENST00000375755 IGHG4P01861 327 aa9.93□□□□□ -0.82
MSH5-204ENST00000375755 TRGV3P03979 118 aa9.93□□□□□ -0.82
MSH5-204ENST00000375755 MYMXA0A1B0GTQ4 84 aa9.93□□□□□ -0.82
MSH5-204ENST00000375755 IGHV4-39P01824 125 aa9.93□□□□□ -0.82
MSH5-204ENST00000375755 LAGE3Q14657 143 aa9.93□□□□□ -0.82
MSH5-204ENST00000375755 DLX4Q92988 240 aaPredicted RBP9.93□□□□□ -0.82
MSH5-204ENST00000375755 TRAV26-2A0A0B4J265 109 aa9.92□□□□□ -0.82
MSH5-204ENST00000375755 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
MSH5-204ENST00000375755 CARD19Q96LW7 228 aa9.92□□□□□ -0.82
MSH5-204ENST00000375755 UFC1Q9Y3C8 167 aa9.92□□□□□ -0.82
MSH5-204ENST00000375755 LINC01619G3V211 115 aa9.92□□□□□ -0.82
MSH5-204ENST00000375755 PLNP26678 52 aa9.92□□□□□ -0.82
MSH5-204ENST00000375755 ANAPC13Q9BS18 74 aa9.92□□□□□ -0.82
MSH5-204ENST00000375755 OR11H12B2RN74 326 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 LGALS1P09382 135 aaKnown RBP9.91□□□□□ -0.82
MSH5-204ENST00000375755 PSMB2P49721 201 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 ZFP2Q6ZN57 461 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 NRACQ8N912 160 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 OR11H1Q8NG94 326 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 OR11H2Q8NH07 326 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 LINC01549A6NIU2 74 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 FABP5P3A8MUU1 101 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 SRSF2Q01130 221 aaKnown RBP9.91□□□□□ -0.82
MSH5-204ENST00000375755 ERCC8Q13216 396 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 OR11H6Q8NGC7 330 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 CFHR4Q92496 578 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 ERG28Q9UKR5 140 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 PRTN3P24158 256 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 DPM3Q9P2X0 92 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 SMAD5-AS1Q9Y6J3 95 aa9.91□□□□□ -0.82
MSH5-204ENST00000375755 ODF3BA8MYP8 253 aa9.9□□□□□ -0.82
MSH5-204ENST00000375755 TGFAP01135 160 aa9.9□□□□□ -0.82
MSH5-204ENST00000375755 LMO4P61968 165 aa9.9□□□□□ -0.82
MSH5-204ENST00000375755 HES1Q14469 280 aa9.9□□□□□ -0.82
MSH5-204ENST00000375755 C5orf64Q2M2E5 130 aa9.9□□□□□ -0.82
MSH5-204ENST00000375755 LOC107984156A0A0G2JMH3 177 aa9.9□□□□□ -0.83
MSH5-204ENST00000375755 ARL17AQ8IVW1 177 aa9.9□□□□□ -0.83
MSH5-204ENST00000375755 IGHV3OR16-10A0A075B7F0 116 aa9.89□□□□□ -0.83
MSH5-204ENST00000375755 F8VRH5 84 aa9.89□□□□□ -0.83
MSH5-204ENST00000375755 H7C1H1 209 aa9.89□□□□□ -0.83
MSH5-204ENST00000375755 PRAC2D3DTV9 90 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 F8W735 103 aaPredicted RBP9.88□□□□□ -0.83
MSH5-204ENST00000375755 M0R1W7 72 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms