RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 CDC34P49427 236 aaPredicted RBP9.7□□□□□ -0.86
NELFE-201ENST00000375425 MAPKAPK5-AS1Q8N8E1 139 aa9.7□□□□□ -0.86
NELFE-201ENST00000375425 OR4C5Q8NGB2 326 aa9.7□□□□□ -0.86
NELFE-201ENST00000375425 OR2G3Q8NGZ4 309 aa9.7□□□□□ -0.86
NELFE-201ENST00000375425 PCNPQ8WW12 178 aaKnown RBP9.7□□□□□ -0.86
NELFE-201ENST00000375425 RAB24Q969Q5 203 aa9.7□□□□□ -0.86
NELFE-201ENST00000375425 ORM1P02763 201 aa9.69□□□□□ -0.86
NELFE-201ENST00000375425 TYMSP04818 313 aa9.69□□□□□ -0.86
NELFE-201ENST00000375425 ATP6V0CP27449 155 aa9.69□□□□□ -0.86
NELFE-201ENST00000375425 MED28Q9H204 178 aa9.69□□□□□ -0.86
NELFE-201ENST00000375425 SDF2L1Q9HCN8 221 aa9.69□□□□□ -0.86
NELFE-201ENST00000375425 LY96Q9Y6Y9 160 aa9.69□□□□□ -0.86
NELFE-201ENST00000375425 TRAV9-2A0A087WT02 112 aa9.68□□□□□ -0.86
NELFE-201ENST00000375425 Q5BKY6 102 aa9.68□□□□□ -0.86
NELFE-201ENST00000375425 SUN5Q8TC36 379 aa9.68□□□□□ -0.86
NELFE-201ENST00000375425 KCNS1Q96KK3 526 aa9.68□□□□□ -0.86
NELFE-201ENST00000375425 AQP10Q96PS8 301 aa9.68□□□□□ -0.86
NELFE-201ENST00000375425 PSMG3Q9BT73 122 aaPredicted RBP9.68□□□□□ -0.86
NELFE-201ENST00000375425 SERTM2A0A1B0GWG4 89 aa9.67□□□□□ -0.86
NELFE-201ENST00000375425 C9JCJ5 164 aa9.67□□□□□ -0.86
NELFE-201ENST00000375425 MBP02144 154 aa9.67□□□□□ -0.86
NELFE-201ENST00000375425 TCRAP04437 139 aa9.67□□□□□ -0.86
NELFE-201ENST00000375425 GCHFRP30047 84 aa9.67□□□□□ -0.86
NELFE-201ENST00000375425 SERF2P84101 59 aa9.67□□□□□ -0.86
NELFE-201ENST00000375425 WFDC10BQ8IUB3 73 aa9.67□□□□□ -0.86
NELFE-201ENST00000375425 C5orf17Q8NAS9 161 aa9.67□□□□□ -0.86
NELFE-201ENST00000375425 ASB13Q8WXK3 278 aa9.67□□□□□ -0.86
NELFE-201ENST00000375425 TXNDC17Q9BRA2 123 aa9.67□□□□□ -0.86
NELFE-201ENST00000375425 NDFIP1Q9BT67 221 aa9.67□□□□□ -0.86
NELFE-201ENST00000375425 LOC100131303A0A0U1RQF7 123 aa9.66□□□□□ -0.86
NELFE-201ENST00000375425 PTTG1O95997 202 aa9.66□□□□□ -0.86
NELFE-201ENST00000375425 ZNF80P51504 273 aaPredicted RBP9.66□□□□□ -0.86
NELFE-201ENST00000375425 SUMO1P63165 101 aaKnown RBP9.66□□□□□ -0.86
NELFE-201ENST00000375425 NFE4Q86UQ8 179 aa9.66□□□□□ -0.86
NELFE-201ENST00000375425 PGPEP1Q9NXJ5 209 aa9.66□□□□□ -0.86
NELFE-201ENST00000375425 PSG8Q9UQ74 426 aa9.66□□□□□ -0.86
NELFE-201ENST00000375425 K7EQM0 130 aa9.65□□□□□ -0.86
NELFE-201ENST00000375425 EREGO14944 169 aa9.65□□□□□ -0.86
NELFE-201ENST00000375425 EVI2AP22794 236 aa9.65□□□□□ -0.86
NELFE-201ENST00000375425 FUSP35637 526 aaKnown RBP eCLIP9.65□□□□□ -0.86
NELFE-201ENST00000375425 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
NELFE-201ENST00000375425 Q8N1X5 172 aa9.65□□□□□ -0.86
NELFE-201ENST00000375425 SH3BGRL3Q9H299 93 aa9.65□□□□□ -0.86
NELFE-201ENST00000375425 TMEM167BQ9NRX6 74 aa9.65□□□□□ -0.86
NELFE-201ENST00000375425 C11orf21Q9P2W6 132 aa9.65□□□□□ -0.86
NELFE-201ENST00000375425 EPDR1Q9UM22 224 aa9.65□□□□□ -0.86
NELFE-201ENST00000375425 TNFSF18Q9UNG2 199 aa9.65□□□□□ -0.86
NELFE-201ENST00000375425 K7EP13 123 aa9.65□□□□□ -0.87
NELFE-201ENST00000375425 TAAR5O14804 337 aa9.65□□□□□ -0.87
NELFE-201ENST00000375425 CXorf1O96002 111 aa9.65□□□□□ -0.87
NELFE-201ENST00000375425 GCGP01275 180 aa9.65□□□□□ -0.87
NELFE-201ENST00000375425 IGLV2-11P01706 119 aa9.65□□□□□ -0.87
NELFE-201ENST00000375425 GATA1P15976 413 aaPredicted RBP9.65□□□□□ -0.87
NELFE-201ENST00000375425 ERVFC1-1P60608 527 aa9.65□□□□□ -0.87
NELFE-201ENST00000375425 ACTR3CQ9C0K3 210 aaPredicted RBP9.65□□□□□ -0.87
NELFE-201ENST00000375425 SCRT2Q9NQ03 307 aa9.65□□□□□ -0.87
NELFE-201ENST00000375425 GGTLC3B5MD39 225 aa9.64□□□□□ -0.87
NELFE-201ENST00000375425 PFN1P07737 140 aaKnown RBP9.64□□□□□ -0.87
NELFE-201ENST00000375425 DNAH10OSP0CZ25 163 aa9.64□□□□□ -0.87
NELFE-201ENST00000375425 FLI1Q01543 452 aaPredicted RBP9.64□□□□□ -0.87
NELFE-201ENST00000375425 DPPA3Q6W0C5 159 aa9.64□□□□□ -0.87
NELFE-201ENST00000375425 SH2D6Q7Z4S9 175 aa9.64□□□□□ -0.87
NELFE-201ENST00000375425 PRNTQ86SH4 94 aa9.64□□□□□ -0.87
NELFE-201ENST00000375425 TMEM75Q8N9X5 138 aa9.64□□□□□ -0.87
NELFE-201ENST00000375425 NHLRC2Q8NBF2 726 aa9.64□□□□□ -0.87
NELFE-201ENST00000375425 INO80EQ8NBZ0 244 aaPredicted RBP9.64□□□□□ -0.87
NELFE-201ENST00000375425 MSRB1Q9NZV6 116 aa9.64□□□□□ -0.87
NELFE-201ENST00000375425 FAT1Q14517 4588 aa9.63□□□□□ -0.87
NELFE-201ENST00000375425 FBLL1A6NHQ2 334 aaKnown RBP9.63□□□□□ -0.87
NELFE-201ENST00000375425 GIPP09681 153 aaPredicted RBP9.63□□□□□ -0.87
NELFE-201ENST00000375425 SMUG1Q53HV7 270 aa9.63□□□□□ -0.87
NELFE-201ENST00000375425 CFAP126Q5VTH2 177 aa9.63□□□□□ -0.87
NELFE-201ENST00000375425 RPL7L1Q6DKI1 246 aaKnown RBP9.63□□□□□ -0.87
NELFE-201ENST00000375425 SLC25A29Q8N8R3 303 aa9.63□□□□□ -0.87
NELFE-201ENST00000375425 LINC00479Q96M42 142 aa9.63□□□□□ -0.87
NELFE-201ENST00000375425 A0A087WTM6 91 aa9.62□□□□□ -0.87
NELFE-201ENST00000375425 RS1O15537 224 aa9.62□□□□□ -0.87
NELFE-201ENST00000375425 CRYGDP07320 174 aa9.62□□□□□ -0.87
NELFE-201ENST00000375425 ZFP69Q49AA0 526 aa9.62□□□□□ -0.87
NELFE-201ENST00000375425 SAPCD1Q5SSQ6 148 aa9.62□□□□□ -0.87
NELFE-201ENST00000375425 CYB561D1Q8N8Q1 229 aa9.62□□□□□ -0.87
NELFE-201ENST00000375425 C9orf85Q96MD7 179 aa9.62□□□□□ -0.87
NELFE-201ENST00000375425 FXYD6-FXYD2A0A087WZ82 144 aa9.61□□□□□ -0.87
NELFE-201ENST00000375425 BORCS7-ASMTA0A0B4J1R7 106 aa9.61□□□□□ -0.87
NELFE-201ENST00000375425 IGHV3-73A0A0B4J1V6 119 aa9.61□□□□□ -0.87
NELFE-201ENST00000375425 IGHV3-38A0A0C4DH36 116 aa9.61□□□□□ -0.87
NELFE-201ENST00000375425 A0A1W2PRE2 83 aa9.61□□□□□ -0.87
NELFE-201ENST00000375425 RNF222A6NCQ9 220 aa9.61□□□□□ -0.87
NELFE-201ENST00000375425 PGPEP1LA6NFU8 196 aa9.61□□□□□ -0.87
NELFE-201ENST00000375425 CIDEAO60543 219 aa9.61□□□□□ -0.87
NELFE-201ENST00000375425 PPT1P50897 306 aa9.61□□□□□ -0.87
NELFE-201ENST00000375425 TIRAPP58753 221 aa9.61□□□□□ -0.87
NELFE-201ENST00000375425 PRADC1Q9BSG0 188 aa9.61□□□□□ -0.87
NELFE-201ENST00000375425 TRAV34A0A0B4J273 112 aa9.6□□□□□ -0.87
NELFE-201ENST00000375425 RNASE3P12724 160 aaKnown RBP9.6□□□□□ -0.87
NELFE-201ENST00000375425 ZNF726P1Q15940 193 aa9.6□□□□□ -0.87
NELFE-201ENST00000375425 ZNF506Q5JVG8 444 aa9.6□□□□□ -0.87
NELFE-201ENST00000375425 CDPF1Q6NVV7 123 aa9.6□□□□□ -0.87
NELFE-201ENST00000375425 C10orf126Q8N4M7 172 aa9.6□□□□□ -0.87
NELFE-201ENST00000375425 TRBV6-4A0A1B0GX49 114 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms