RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 PLAC8L1A1L4L8 177 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 LINC00308Q8TCZ7 52 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 FREM1Q5H8C1 2179 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 LOXHD1Q8IVV2 1947 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 NDUFA1O15239 70 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 EFNA2O43921 213 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 DIRC1Q969H9 104 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 C10orf55Q5SWW7 151 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 IGHV1-46P01743 117 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 NDPQ00604 133 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 hDV103S1A0JD37 113 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 IGLV3-19P01714 112 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 Q6ZR03 302 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 C20orf203Q8NBC4 194 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 A0A0J9YXV3 536 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 CFHR3Q02985 330 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 LOXL1Q08397 574 aaPredicted RBP5.13□□□□□ -1.59
UBR4-204ENST00000375254 SCN2AQ99250 2005 aa5.13□□□□□ -1.59
UBR4-204ENST00000375254 GATA1P15976 413 aaPredicted RBP5.12□□□□□ -1.59
UBR4-204ENST00000375254 TP53TG3Q9ULZ0 132 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 TMEM263Q8WUH6 116 aaKnown RBP5.12□□□□□ -1.59
UBR4-204ENST00000375254 ZNF71Q9NQZ8 489 aaPredicted RBP5.12□□□□□ -1.59
UBR4-204ENST00000375254 HHLA3Q9XRX5 114 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 SORL1Q92673 2214 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 KIDINS220Q9ULH0 1771 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 GDF5OSQ5U4N7 250 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 CFHR1Q03591 330 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 GATA3P23771 443 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 PIKFYVEQ9Y2I7 2098 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 RFPL3SP0C7P2 107 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 MBD3L4A6NDZ8 208 aaPredicted RBP5.12□□□□□ -1.59
UBR4-204ENST00000375254 MBD3L3A6NE82 208 aaPredicted RBP5.12□□□□□ -1.59
UBR4-204ENST00000375254 MBD3L5A6NJ08 208 aaPredicted RBP5.12□□□□□ -1.59
UBR4-204ENST00000375254 FLVCR1-AS1Q8TAF5 88 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 UBE2D1P51668 147 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 SCN5AQ14524 2016 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 SCN3AQ9NY46 2000 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 S4R3C0 116 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 GP9P14770 177 aa5.12□□□□□ -1.59
UBR4-204ENST00000375254 MAPKAPK5-AS1Q8N8E1 139 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 NPBQ8NG41 125 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 MALRD1Q5VYJ5 2156 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 CCL21O00585 134 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 C4orf26Q17RF5 130 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 KAAG1Q9UBP8 84 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 KRTAP27-1Q3LI81 207 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 ZNF646O15015 1829 aaPredicted RBP5.11□□□□□ -1.59
UBR4-204ENST00000375254 UBR1Q8IWV7 1749 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 PRR19A6NJB7 356 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 CLTCQ00610 1675 aaKnown RBP5.11□□□□□ -1.59
UBR4-204ENST00000375254 NFE4Q86UQ8 179 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 Q8N976 141 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 ETDCA0A1B0GVM5 59 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 CHD1O14646 1710 aa5.11□□□□□ -1.59
UBR4-204ENST00000375254 BEAN1Q3B7T3 259 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 SLC22A18ASQ8N1D0 253 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 KLK9Q9UKQ9 250 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 RPL28P46779 137 aaKnown RBP5.1□□□□□ -1.59
UBR4-204ENST00000375254 RNASE6Q93091 150 aaKnown RBP5.1□□□□□ -1.59
UBR4-204ENST00000375254 A0A1B0GW54 56 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 Q9HAA7 133 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 DEFB105AQ8NG35 78 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 TIAM2Q8IVF5 1701 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 PRR31Q5SQ13 230 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 IGHV3OR16-8A0A075B7F1 116 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 RNF185Q96GF1 192 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 PLA2G2FQ9BZM2 168 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 COX7BP24311 80 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 BSPH1Q075Z2 132 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 RSPO1Q2MKA7 263 aaPredicted RBP5.1□□□□□ -1.59
UBR4-204ENST00000375254 GNRH2O43555 120 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 LPAL2Q16609 132 aa5.1□□□□□ -1.59
UBR4-204ENST00000375254 COX17Q14061 63 aa5.09□□□□□ -1.59
UBR4-204ENST00000375254 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.09□□□□□ -1.59
UBR4-204ENST00000375254 MIR7-3HGQ8N6C7 128 aa5.09□□□□□ -1.59
UBR4-204ENST00000375254 SNURFQ9Y675 71 aa5.09□□□□□ -1.59
UBR4-204ENST00000375254 XRN1Q8IZH2 1706 aaKnown RBP5.09□□□□□ -1.59
UBR4-204ENST00000375254 EBI3Q14213 229 aa5.09□□□□□ -1.59
UBR4-204ENST00000375254 ODF3Q96PU9 254 aa5.09□□□□□ -1.59
UBR4-204ENST00000375254 HIGD2AQ9BW72 106 aa5.09□□□□□ -1.59
UBR4-204ENST00000375254 RSPO4Q2I0M5 234 aaPredicted RBP5.09□□□□□ -1.59
UBR4-204ENST00000375254 RNF144BQ7Z419 303 aa5.09□□□□□ -1.59
UBR4-204ENST00000375254 TGFBR3LH3BV60 316 aa5.09□□□□□ -1.59
UBR4-204ENST00000375254 CCL24O00175 119 aa5.09□□□□□ -1.59
UBR4-204ENST00000375254 LMO7Q8WWI1 1683 aa5.09□□□□□ -1.59
UBR4-204ENST00000375254 LINC00205P59089 165 aa5.09□□□□□ -1.6
UBR4-204ENST00000375254 ARHGEF28Q8N1W1 1705 aaKnown RBP5.09□□□□□ -1.6
UBR4-204ENST00000375254 IGHV4OR15-8A0A075B7B6 117 aa5.09□□□□□ -1.6
UBR4-204ENST00000375254 A0A087WW49 117 aa5.09□□□□□ -1.6
UBR4-204ENST00000375254 CRYBG1Q9Y4K1 1723 aa5.09□□□□□ -1.6
UBR4-204ENST00000375254 K7EMT4 169 aa5.09□□□□□ -1.6
UBR4-204ENST00000375254 SAP25Q8TEE9 199 aa5.09□□□□□ -1.6
UBR4-204ENST00000375254 C7orf69Q9H7B7 122 aa5.09□□□□□ -1.6
UBR4-204ENST00000375254 IGKV1-17P01599 117 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 CYP4F30PQ9H0H9 118 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 C3P01024 1663 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 NSUN5P1Q3KNT7 163 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 Q8N9L7 120 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 PREX1Q8TCU6 1659 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 CNFNQ9BYD5 112 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms