RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 RIF1Q5UIP0 2472 aaKnown RBP16.6■□□□□ 0.25
TGFBR1-202ENST00000374994 LINC01619G3V211 115 aa16.6■□□□□ 0.25
TGFBR1-202ENST00000374994 IGHG4P01861 327 aa16.6■□□□□ 0.25
TGFBR1-202ENST00000374994 TRAV13-2A0A0B4J235 113 aa16.6■□□□□ 0.25
TGFBR1-202ENST00000374994 RNASE8Q8TDE3 154 aaKnown RBP16.6■□□□□ 0.25
TGFBR1-202ENST00000374994 SPATA12Q7Z6I5 190 aa16.59■□□□□ 0.25
TGFBR1-202ENST00000374994 C11orf44Q8N8P7 122 aa16.59■□□□□ 0.25
TGFBR1-202ENST00000374994 IGKV1OR2-108A0A075B7D4 117 aa16.59■□□□□ 0.25
TGFBR1-202ENST00000374994 ODF3L1Q8IXM7 274 aa16.59■□□□□ 0.25
TGFBR1-202ENST00000374994 TEX48A0A1B0GUV7 120 aa16.58■□□□□ 0.25
TGFBR1-202ENST00000374994 PRR30Q53SZ7 412 aaPredicted RBP16.58■□□□□ 0.25
TGFBR1-202ENST00000374994 NTN5Q8WTR8 489 aaPredicted RBP16.58■□□□□ 0.24
TGFBR1-202ENST00000374994 TMEM243Q9BU79 118 aa16.58■□□□□ 0.24
TGFBR1-202ENST00000374994 PRSS47A8MTI9 375 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 ELANEP08246 267 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 CACNA1HO95180 2353 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 KIAA1671Q9BY89 1806 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 GAGE12JA6NER3 117 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 GAGE4Q13068 117 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 GAGE5Q13069 117 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 POLEQ07864 2286 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 GAGE7O76087 117 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 CRYGCP07315 174 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 GAGE12FP0CL80 117 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 GAGE12GP0CL81 117 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 GAGE12IP0CL82 117 aa16.57■□□□□ 0.24
TGFBR1-202ENST00000374994 WI2-2373I1.2A0A1W2PRP0 233 aa16.56■□□□□ 0.24
TGFBR1-202ENST00000374994 C19orf71A6NCJ1 209 aa16.56■□□□□ 0.24
TGFBR1-202ENST00000374994 CTRLP40313 264 aa16.56■□□□□ 0.24
TGFBR1-202ENST00000374994 FOXE3Q13461 319 aa16.56■□□□□ 0.24
TGFBR1-202ENST00000374994 ZNF48Q96MX3 618 aaPredicted RBP16.56■□□□□ 0.24
TGFBR1-202ENST00000374994 IGLV2-23P01705 113 aa16.56■□□□□ 0.24
TGFBR1-202ENST00000374994 NSUN5P1Q3KNT7 163 aa16.56■□□□□ 0.24
TGFBR1-202ENST00000374994 YPEL4Q96NS1 127 aa16.56■□□□□ 0.24
TGFBR1-202ENST00000374994 RPL35AP18077 110 aaKnown RBP16.55■□□□□ 0.24
TGFBR1-202ENST00000374994 J3QLI3 93 aa16.55■□□□□ 0.24
TGFBR1-202ENST00000374994 ZNRF2Q8NHG8 242 aa16.55■□□□□ 0.24
TGFBR1-202ENST00000374994 ACYP1P07311 99 aa16.55■□□□□ 0.24
TGFBR1-202ENST00000374994 XCL2Q9UBD3 114 aa16.55■□□□□ 0.24
TGFBR1-202ENST00000374994 CTSGP08311 255 aa16.55■□□□□ 0.24
TGFBR1-202ENST00000374994 SPRNQ5BIV9 151 aa16.55■□□□□ 0.24
TGFBR1-202ENST00000374994 GATA1P15976 413 aaPredicted RBP16.54■□□□□ 0.24
TGFBR1-202ENST00000374994 TCTEX1D4Q5JR98 221 aa16.54■□□□□ 0.24
TGFBR1-202ENST00000374994 C2orf70A6NJV1 201 aa16.54■□□□□ 0.24
TGFBR1-202ENST00000374994 A0A1B0GXF2 115 aa16.54■□□□□ 0.24
TGFBR1-202ENST00000374994 PIP4P1Q86T03 277 aa16.54■□□□□ 0.24
TGFBR1-202ENST00000374994 DKK4Q9UBT3 224 aa16.54■□□□□ 0.24
TGFBR1-202ENST00000374994 UBL5Q9BZL1 73 aa16.54■□□□□ 0.24
TGFBR1-202ENST00000374994 TRAV12-2A0A075B6T6 113 aa16.53■□□□□ 0.24
TGFBR1-202ENST00000374994 HOXB4P17483 251 aaPredicted RBP16.53■□□□□ 0.24
TGFBR1-202ENST00000374994 DOCK7Q96N67 2140 aa16.53■□□□□ 0.24
TGFBR1-202ENST00000374994 C15orf53Q8NAA6 179 aa16.53■□□□□ 0.24
TGFBR1-202ENST00000374994 CRIP3Q6Q6R5 217 aa16.53■□□□□ 0.24
TGFBR1-202ENST00000374994 PRSS33Q8NF86 280 aa16.53■□□□□ 0.24
TGFBR1-202ENST00000374994 ZNF295-AS1Q8N0V1 137 aa16.52■□□□□ 0.24
TGFBR1-202ENST00000374994 YLPM1P49750 1951 aaKnown RBP16.52■□□□□ 0.24
TGFBR1-202ENST00000374994 BUB3O43684 328 aa16.52■□□□□ 0.24
TGFBR1-202ENST00000374994 MED14OSP0DP75 135 aa16.52■□□□□ 0.23
TGFBR1-202ENST00000374994 IGHV7-81A0A0B4J1V7 117 aa16.52■□□□□ 0.23
TGFBR1-202ENST00000374994 DIDO1Q9BTC0 2240 aaKnown RBP16.51■□□□□ 0.23
TGFBR1-202ENST00000374994 ABCA1O95477 2261 aa16.51■□□□□ 0.23
TGFBR1-202ENST00000374994 GNRH2O43555 120 aa16.51■□□□□ 0.23
TGFBR1-202ENST00000374994 TEX22C9J3V5 150 aa16.51■□□□□ 0.23
TGFBR1-202ENST00000374994 FXYD2P54710 66 aa16.51■□□□□ 0.23
TGFBR1-202ENST00000374994 ANKRD29Q8N6D5 301 aa16.51■□□□□ 0.23
TGFBR1-202ENST00000374994 TEN1Q86WV5 123 aa16.51■□□□□ 0.23
TGFBR1-202ENST00000374994 MSRB1Q9NZV6 116 aa16.51■□□□□ 0.23
TGFBR1-202ENST00000374994 CENPVL3A0A0U1RRI6 287 aa16.51■□□□□ 0.23
TGFBR1-202ENST00000374994 FRMD6-AS1P0C7T7 363 aa16.51■□□□□ 0.23
TGFBR1-202ENST00000374994 IGF2-ASQ6U949 168 aa16.51■□□□□ 0.23
TGFBR1-202ENST00000374994 MALRD1Q5VYJ5 2156 aa16.5■□□□□ 0.23
TGFBR1-202ENST00000374994 IGLV1-47P01700 117 aa16.5■□□□□ 0.23
TGFBR1-202ENST00000374994 IGHV3-16A0A0C4DH30 117 aa16.5■□□□□ 0.23
TGFBR1-202ENST00000374994 ZNF503Q96F45 646 aa16.5■□□□□ 0.23
TGFBR1-202ENST00000374994 Q6ZPA2 131 aa16.5■□□□□ 0.23
TGFBR1-202ENST00000374994 RPL32P62910 135 aaKnown RBP16.49■□□□□ 0.23
TGFBR1-202ENST00000374994 GAGE6Q13070 117 aa16.49■□□□□ 0.23
TGFBR1-202ENST00000374994 CADP27708 2225 aa16.49■□□□□ 0.23
TGFBR1-202ENST00000374994 CACNA1GO43497 2377 aa16.49■□□□□ 0.23
TGFBR1-202ENST00000374994 DEFB130BP0DP73 79 aa16.49■□□□□ 0.23
TGFBR1-202ENST00000374994 DEFB130AP0DP74 79 aa16.49■□□□□ 0.23
TGFBR1-202ENST00000374994 ZFP2Q6ZN57 461 aa16.49■□□□□ 0.23
TGFBR1-202ENST00000374994 LINC00574Q9H8X3 128 aa16.49■□□□□ 0.23
TGFBR1-202ENST00000374994 HERV-K104P63124 156 aa16.48■□□□□ 0.23
TGFBR1-202ENST00000374994 USF3Q68DE3 2245 aa16.48■□□□□ 0.23
TGFBR1-202ENST00000374994 SPTAN1Q13813 2472 aaKnown RBP16.48■□□□□ 0.23
TGFBR1-202ENST00000374994 SH2D6Q7Z4S9 175 aa16.48■□□□□ 0.23
TGFBR1-202ENST00000374994 COL4A4P53420 1690 aaPredicted RBP16.48■□□□□ 0.23
TGFBR1-202ENST00000374994 IGLV2-8P01709 118 aa16.48■□□□□ 0.23
TGFBR1-202ENST00000374994 C9orf47Q6ZRZ4 202 aa16.48■□□□□ 0.23
TGFBR1-202ENST00000374994 SPRY4Q9C004 299 aa16.48■□□□□ 0.23
TGFBR1-202ENST00000374994 RITA1Q96K30 269 aa16.47■□□□□ 0.23
TGFBR1-202ENST00000374994 RNF114Q9Y508 228 aa16.47■□□□□ 0.23
TGFBR1-202ENST00000374994 ZNF106Q9H2Y7 1883 aaKnown RBP16.47■□□□□ 0.23
TGFBR1-202ENST00000374994 PFN2P35080 140 aa16.47■□□□□ 0.23
TGFBR1-202ENST00000374994 C16orf54Q6UWD8 224 aa16.47■□□□□ 0.23
TGFBR1-202ENST00000374994 E9PLD3 99 aa16.47■□□□□ 0.23
TGFBR1-202ENST00000374994 IGHV3-38A0A0C4DH36 116 aa16.46■□□□□ 0.23
TGFBR1-202ENST00000374994 TIMM17AQ99595 171 aa16.46■□□□□ 0.23
TGFBR1-202ENST00000374994 F8WEM9 126 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms