RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 Q9HAA7 133 aa9.2□□□□□ -0.94
CXCL12-202ENST00000374426 EIF3GO75821 320 aaKnown RBP eCLIP9.19□□□□□ -0.94
CXCL12-202ENST00000374426 TYMSP04818 313 aa9.19□□□□□ -0.94
CXCL12-202ENST00000374426 KHDC3LQ587J8 217 aa9.19□□□□□ -0.94
CXCL12-202ENST00000374426 FFAR4Q5NUL3 377 aa9.19□□□□□ -0.94
CXCL12-202ENST00000374426 TVP23CQ96ET8 276 aa9.19□□□□□ -0.94
CXCL12-202ENST00000374426 CCDC32Q9BV29 185 aa9.19□□□□□ -0.94
CXCL12-202ENST00000374426 NMES1Q9C002 83 aa9.19□□□□□ -0.94
CXCL12-202ENST00000374426 TRAV8-6A0A0B4J262 113 aa9.18□□□□□ -0.94
CXCL12-202ENST00000374426 TRAV21A0A0B4J279 112 aa9.18□□□□□ -0.94
CXCL12-202ENST00000374426 F6UZH7 168 aa9.18□□□□□ -0.94
CXCL12-202ENST00000374426 PFN1P07737 140 aaKnown RBP9.18□□□□□ -0.94
CXCL12-202ENST00000374426 LRP1Q07954 4544 aaKnown RBP9.18□□□□□ -0.94
CXCL12-202ENST00000374426 SLC25A29Q8N8R3 303 aa9.18□□□□□ -0.94
CXCL12-202ENST00000374426 ATP5SQ99766 215 aa9.18□□□□□ -0.94
CXCL12-202ENST00000374426 SDF2L1Q9HCN8 221 aa9.18□□□□□ -0.94
CXCL12-202ENST00000374426 OTORQ9NRC9 128 aa9.18□□□□□ -0.94
CXCL12-202ENST00000374426 RPH3ALQ9UNE2 315 aa9.18□□□□□ -0.94
CXCL12-202ENST00000374426 HMCN2Q8NDA2 5059 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 TRAV8-1A0A0A6YYK1 113 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 PGPA6NDG6 321 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 FBLL1A6NHQ2 334 aaKnown RBP9.17□□□□□ -0.94
CXCL12-202ENST00000374426 J3QL48 77 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 IGHV3-30P01768 117 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 IGHV3-33P01772 117 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 C1QBP02746 253 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 IGHV3-30-3P0DP02 117 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 IGHV3-30-5P0DP03 117 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 TAS2R45P59539 299 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 OR10J3Q5JRS4 329 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 DPPA3Q6W0C5 159 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 GOLT1AQ6ZVE7 132 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 CMTM2Q8TAZ6 248 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 TREM1Q9NP99 234 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 MBD2Q9UBB5 411 aa9.17□□□□□ -0.94
CXCL12-202ENST00000374426 WFDC2Q14508 124 aa9.16□□□□□ -0.94
CXCL12-202ENST00000374426 ZNF876PQ49A33 203 aa9.16□□□□□ -0.94
CXCL12-202ENST00000374426 LELP1Q5T871 98 aa9.16□□□□□ -0.94
CXCL12-202ENST00000374426 CFAP126Q5VTH2 177 aa9.16□□□□□ -0.94
CXCL12-202ENST00000374426 ASB13Q8WXK3 278 aa9.16□□□□□ -0.94
CXCL12-202ENST00000374426 KCNS1Q96KK3 526 aa9.16□□□□□ -0.94
CXCL12-202ENST00000374426 BOLA1Q9Y3E2 137 aa9.16□□□□□ -0.94
CXCL12-202ENST00000374426 TRBV6-4A0A1B0GX49 114 aa9.15□□□□□ -0.94
CXCL12-202ENST00000374426 H2BFSP57053 126 aa9.15□□□□□ -0.94
CXCL12-202ENST00000374426 ASAH1Q13510 395 aa9.15□□□□□ -0.94
CXCL12-202ENST00000374426 LAGE3Q14657 143 aa9.15□□□□□ -0.94
CXCL12-202ENST00000374426 RHOHQ15669 191 aa9.15□□□□□ -0.94
CXCL12-202ENST00000374426 FAM74A1Q5RGS3 127 aa9.15□□□□□ -0.94
CXCL12-202ENST00000374426 MZT2BQ6NZ67 158 aa9.15□□□□□ -0.94
CXCL12-202ENST00000374426 Q6ZSA8 131 aa9.15□□□□□ -0.94
CXCL12-202ENST00000374426 ARL6IP6Q8N6S5 226 aa9.15□□□□□ -0.94
CXCL12-202ENST00000374426 PRADC1Q9BSG0 188 aa9.15□□□□□ -0.94
CXCL12-202ENST00000374426 C11orf21Q9P2W6 132 aa9.15□□□□□ -0.94
CXCL12-202ENST00000374426 IGHV3-73A0A0B4J1V6 119 aa9.14□□□□□ -0.95
CXCL12-202ENST00000374426 RS1O15537 224 aa9.14□□□□□ -0.95
CXCL12-202ENST00000374426 GNG5P63218 68 aa9.14□□□□□ -0.95
CXCL12-202ENST00000374426 CYCSP99999 105 aaKnown RBP9.14□□□□□ -0.95
CXCL12-202ENST00000374426 Q8N3U1 123 aa9.14□□□□□ -0.95
CXCL12-202ENST00000374426 PPP1R1CQ8WVI7 109 aa9.14□□□□□ -0.95
CXCL12-202ENST00000374426 GTSF1LQ9H1H1 148 aa9.14□□□□□ -0.95
CXCL12-202ENST00000374426 HSPB11Q9Y547 144 aa9.14□□□□□ -0.95
CXCL12-202ENST00000374426 CIDEAO60543 219 aa9.13□□□□□ -0.95
CXCL12-202ENST00000374426 PLA2G1BP04054 148 aaKnown RBP9.13□□□□□ -0.95
CXCL12-202ENST00000374426 ZNF80P51504 273 aaPredicted RBP9.13□□□□□ -0.95
CXCL12-202ENST00000374426 PQLC2Q6ZP29 291 aa9.13□□□□□ -0.95
CXCL12-202ENST00000374426 LINC00528Q8N1L1 170 aa9.13□□□□□ -0.95
CXCL12-202ENST00000374426 ATP6V0E2Q8NHE4 81 aa9.13□□□□□ -0.95
CXCL12-202ENST00000374426 SCGB1C1Q8TD33 95 aa9.13□□□□□ -0.95
CXCL12-202ENST00000374426 SGK494Q96LW2 274 aa9.13□□□□□ -0.95
CXCL12-202ENST00000374426 C9orf85Q96MD7 179 aa9.13□□□□□ -0.95
CXCL12-202ENST00000374426 TM2D2Q9BX73 214 aa9.13□□□□□ -0.95
CXCL12-202ENST00000374426 SMIM3Q9BZL3 60 aa9.13□□□□□ -0.95
CXCL12-202ENST00000374426 UBR4Q5T4S7 5183 aa9.12□□□□□ -0.95
CXCL12-202ENST00000374426 KRTAP29-1A8MX34 341 aaPredicted RBP9.12□□□□□ -0.95
CXCL12-202ENST00000374426 FAT3Q8TDW7 4589 aa9.11□□□□□ -0.95
CXCL12-202ENST00000374426 PGPEP1LA6NFU8 196 aa9.11□□□□□ -0.95
CXCL12-202ENST00000374426 LECT2O14960 151 aa9.11□□□□□ -0.95
CXCL12-202ENST00000374426 HMGB3O15347 200 aaKnown RBP9.11□□□□□ -0.95
CXCL12-202ENST00000374426 MPC2O95563 127 aa9.11□□□□□ -0.95
CXCL12-202ENST00000374426 MGST1P10620 155 aaKnown RBP9.11□□□□□ -0.95
CXCL12-202ENST00000374426 RPL12P30050 165 aaKnown RBP9.11□□□□□ -0.95
CXCL12-202ENST00000374426 RAB2AP61019 212 aa9.11□□□□□ -0.95
CXCL12-202ENST00000374426 ZNF506Q5JVG8 444 aa9.11□□□□□ -0.95
CXCL12-202ENST00000374426 TMEM75Q8N9X5 138 aa9.11□□□□□ -0.95
CXCL12-202ENST00000374426 ENKURQ8TC29 256 aa9.11□□□□□ -0.95
CXCL12-202ENST00000374426 WFDC1Q9HC57 220 aa9.11□□□□□ -0.95
CXCL12-202ENST00000374426 A0A1W2PPV4 95 aa9.1□□□□□ -0.95
CXCL12-202ENST00000374426 RNASE3P12724 160 aaKnown RBP9.1□□□□□ -0.95
CXCL12-202ENST00000374426 ACOT6Q3I5F7 207 aaPredicted RBP9.1□□□□□ -0.95
CXCL12-202ENST00000374426 PTH2Q96A98 100 aa9.1□□□□□ -0.95
CXCL12-202ENST00000374426 NDFIP1Q9BT67 221 aa9.1□□□□□ -0.95
CXCL12-202ENST00000374426 NDUFA13Q9P0J0 144 aa9.1□□□□□ -0.95
CXCL12-202ENST00000374426 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.09□□□□□ -0.95
CXCL12-202ENST00000374426 TRAV8-3A0A0A6YYJ7 113 aa9.09□□□□□ -0.95
CXCL12-202ENST00000374426 SERTM2A0A1B0GWG4 89 aa9.09□□□□□ -0.95
CXCL12-202ENST00000374426 TAAR5O14804 337 aa9.09□□□□□ -0.95
CXCL12-202ENST00000374426 GCGP01275 180 aa9.09□□□□□ -0.95
CXCL12-202ENST00000374426 TCRAP04437 139 aa9.09□□□□□ -0.95
CXCL12-202ENST00000374426 PET100P0DJ07 73 aa9.09□□□□□ -0.95
CXCL12-202ENST00000374426 ARL14EPLP0DKL9 152 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms