RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 IGF2-ASQ6U949 168 aa13.61□□□□□ -0.23
PTPRU-202ENST00000373779 PF4P02776 101 aa13.61□□□□□ -0.23
PTPRU-202ENST00000373779 TNRC6AQ8NDV7 1962 aaKnown RBP13.61□□□□□ -0.23
PTPRU-202ENST00000373779 CTSGP08311 255 aa13.6□□□□□ -0.23
PTPRU-202ENST00000373779 SPINK13Q1W4C9 94 aa13.6□□□□□ -0.23
PTPRU-202ENST00000373779 TRBV25-1A0A075B6N4 114 aa13.6□□□□□ -0.23
PTPRU-202ENST00000373779 KLK9Q9UKQ9 250 aa13.6□□□□□ -0.23
PTPRU-202ENST00000373779 I3L3M4 83 aa13.6□□□□□ -0.23
PTPRU-202ENST00000373779 RASL10AQ92737 203 aa13.6□□□□□ -0.23
PTPRU-202ENST00000373779 IGHV7-81A0A0B4J1V7 117 aa13.6□□□□□ -0.23
PTPRU-202ENST00000373779 GRNP28799 593 aaKnown RBP13.59□□□□□ -0.23
PTPRU-202ENST00000373779 MSRB2Q9Y3D2 182 aa13.59□□□□□ -0.23
PTPRU-202ENST00000373779 TRGV4A0A0C4DH28 118 aa13.59□□□□□ -0.23
PTPRU-202ENST00000373779 RPL36AP83881 106 aaKnown RBP13.59□□□□□ -0.23
PTPRU-202ENST00000373779 AMTNQ6UX39 209 aa13.59□□□□□ -0.23
PTPRU-202ENST00000373779 LINC00322Q6ZN03 302 aaPredicted RBP13.59□□□□□ -0.23
PTPRU-202ENST00000373779 RPL36ALQ969Q0 106 aaKnown RBP13.59□□□□□ -0.23
PTPRU-202ENST00000373779 LENEPQ9Y5L5 61 aa13.59□□□□□ -0.23
PTPRU-202ENST00000373779 ATG2AQ2TAZ0 1938 aa13.59□□□□□ -0.23
PTPRU-202ENST00000373779 PPDPFLQ8WWR9 84 aa13.59□□□□□ -0.23
PTPRU-202ENST00000373779 NBASA2RRP1 2371 aa13.58□□□□□ -0.24
PTPRU-202ENST00000373779 IGHV1OR15-1A0A075B7D0 117 aa13.58□□□□□ -0.24
PTPRU-202ENST00000373779 MSMBP08118 114 aa13.58□□□□□ -0.24
PTPRU-202ENST00000373779 MBD6Q96DN6 1003 aa13.58□□□□□ -0.24
PTPRU-202ENST00000373779 TRGV1A0A0A0MS02 117 aa13.58□□□□□ -0.24
PTPRU-202ENST00000373779 K7EMI3 77 aa13.58□□□□□ -0.24
PTPRU-202ENST00000373779 ZNF493Q6ZR52 646 aa13.58□□□□□ -0.24
PTPRU-202ENST00000373779 PHLDA1Q8WV24 401 aaPredicted RBP13.58□□□□□ -0.24
PTPRU-202ENST00000373779 GAGE12HA6NDE8 117 aa13.58□□□□□ -0.24
PTPRU-202ENST00000373779 PRSS29PA6NIE9 313 aa13.57□□□□□ -0.24
PTPRU-202ENST00000373779 INSP01308 110 aa13.57□□□□□ -0.24
PTPRU-202ENST00000373779 ZGRF1Q86YA3 2104 aa13.57□□□□□ -0.24
PTPRU-202ENST00000373779 IGHV7-4-1A0A0J9YVY3 117 aa13.57□□□□□ -0.24
PTPRU-202ENST00000373779 CTRLP40313 264 aa13.57□□□□□ -0.24
PTPRU-202ENST00000373779 DEFB131AP59861 70 aa13.57□□□□□ -0.24
PTPRU-202ENST00000373779 CFAP161Q6P656 301 aa13.56□□□□□ -0.24
PTPRU-202ENST00000373779 TRAV12-2A0A075B6T6 113 aa13.56□□□□□ -0.24
PTPRU-202ENST00000373779 MLST8Q9BVC4 326 aa13.56□□□□□ -0.24
PTPRU-202ENST00000373779 LINC00158P58513 81 aa13.56□□□□□ -0.24
PTPRU-202ENST00000373779 BOD1L2Q8IYS8 172 aa13.56□□□□□ -0.24
PTPRU-202ENST00000373779 C11orf44Q8N8P7 122 aa13.56□□□□□ -0.24
PTPRU-202ENST00000373779 CHCHD5Q9BSY4 110 aa13.56□□□□□ -0.24
PTPRU-202ENST00000373779 GNRH2O43555 120 aa13.56□□□□□ -0.24
PTPRU-202ENST00000373779 PRO1854Q9UHT4 67 aa13.56□□□□□ -0.24
PTPRU-202ENST00000373779 KNCNA6PVL3 124 aa13.55□□□□□ -0.24
PTPRU-202ENST00000373779 BUB3O43684 328 aa13.55□□□□□ -0.24
PTPRU-202ENST00000373779 C1orf159Q96HA4 380 aa13.55□□□□□ -0.24
PTPRU-202ENST00000373779 TRAV8-3A0A0A6YYJ7 113 aa13.55□□□□□ -0.24
PTPRU-202ENST00000373779 F6UB75 175 aa13.55□□□□□ -0.24
PTPRU-202ENST00000373779 J3QQQ9 107 aa13.55□□□□□ -0.24
PTPRU-202ENST00000373779 SAP30O75446 220 aa13.54□□□□□ -0.24
PTPRU-202ENST00000373779 TCF15Q12870 199 aa13.54□□□□□ -0.24
PTPRU-202ENST00000373779 IGHV3-53P01767 116 aa13.54□□□□□ -0.24
PTPRU-202ENST00000373779 ABCA4P78363 2273 aa13.54□□□□□ -0.24
PTPRU-202ENST00000373779 PRAC2D3DTV9 90 aa13.54□□□□□ -0.24
PTPRU-202ENST00000373779 CEP192Q8TEP8 1941 aa13.54□□□□□ -0.24
PTPRU-202ENST00000373779 IGLL5B9A064 214 aa13.54□□□□□ -0.24
PTPRU-202ENST00000373779 AZU1P20160 251 aa13.54□□□□□ -0.24
PTPRU-202ENST00000373779 LINC01356Q8N9X3 169 aa13.54□□□□□ -0.24
PTPRU-202ENST00000373779 CPAMD8Q8IZJ3 1885 aa13.53□□□□□ -0.24
PTPRU-202ENST00000373779 CENPVL3A0A0U1RRI6 287 aa13.53□□□□□ -0.24
PTPRU-202ENST00000373779 CRPP02741 224 aa13.53□□□□□ -0.24
PTPRU-202ENST00000373779 SPRY2O43597 315 aa13.53□□□□□ -0.24
PTPRU-202ENST00000373779 HIGD1BQ9P298 99 aa13.53□□□□□ -0.24
PTPRU-202ENST00000373779 TRAV13-1A0A0B4J241 112 aa13.53□□□□□ -0.24
PTPRU-202ENST00000373779 FXYD2P54710 66 aa13.53□□□□□ -0.24
PTPRU-202ENST00000373779 SPATA12Q7Z6I5 190 aa13.53□□□□□ -0.24
PTPRU-202ENST00000373779 H3BUA1 57 aa13.53□□□□□ -0.24
PTPRU-202ENST00000373779 FGF6P10767 208 aa13.53□□□□□ -0.24
PTPRU-202ENST00000373779 RHODO00212 210 aa13.52□□□□□ -0.24
PTPRU-202ENST00000373779 RPL39LQ96EH5 51 aaKnown RBP13.52□□□□□ -0.25
PTPRU-202ENST00000373779 PRIMA1Q86XR5 153 aa13.52□□□□□ -0.25
PTPRU-202ENST00000373779 Q8N7P7 452 aa13.52□□□□□ -0.25
PTPRU-202ENST00000373779 Q8N9W7 124 aa13.52□□□□□ -0.25
PTPRU-202ENST00000373779 TTTY13Q9BZ97 58 aa13.52□□□□□ -0.25
PTPRU-202ENST00000373779 DYSFO75923 2080 aa13.52□□□□□ -0.25
PTPRU-202ENST00000373779 GATA3P23771 443 aa13.52□□□□□ -0.25
PTPRU-202ENST00000373779 H3BMM0 161 aa13.51□□□□□ -0.25
PTPRU-202ENST00000373779 UBE2WQ96B02 151 aa13.51□□□□□ -0.25
PTPRU-202ENST00000373779 TEX48A0A1B0GUV7 120 aa13.51□□□□□ -0.25
PTPRU-202ENST00000373779 UBE2E2Q96LR5 201 aa13.51□□□□□ -0.25
PTPRU-202ENST00000373779 PLCE1Q9P212 2302 aa13.51□□□□□ -0.25
PTPRU-202ENST00000373779 KLHL30-AS1Q8NEE0 82 aa13.5□□□□□ -0.25
PTPRU-202ENST00000373779 ZNF48Q96MX3 618 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-202ENST00000373779 MALP21145 153 aa13.5□□□□□ -0.25
PTPRU-202ENST00000373779 LOXL1Q08397 574 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-202ENST00000373779 LEPROTO15243 131 aa13.5□□□□□ -0.25
PTPRU-202ENST00000373779 SRSF2Q01130 221 aaKnown RBP13.5□□□□□ -0.25
PTPRU-202ENST00000373779 CMC4P56277 68 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-202ENST00000373779 EML5Q05BV3 1969 aa13.5□□□□□ -0.25
PTPRU-202ENST00000373779 TMEM86BQ8N661 226 aa13.5□□□□□ -0.25
PTPRU-202ENST00000373779 FANCD2OSQ96PS1 177 aa13.49□□□□□ -0.25
PTPRU-202ENST00000373779 ODF1Q14990 250 aa13.49□□□□□ -0.25
PTPRU-202ENST00000373779 NDUFA12Q9UI09 145 aa13.49□□□□□ -0.25
PTPRU-202ENST00000373779 FOXI2Q6ZQN5 318 aa13.49□□□□□ -0.25
PTPRU-202ENST00000373779 COL5A1P20908 1838 aaPredicted RBP13.49□□□□□ -0.25
PTPRU-202ENST00000373779 C16orf54Q6UWD8 224 aa13.48□□□□□ -0.25
PTPRU-202ENST00000373779 RNF114Q9Y508 228 aa13.48□□□□□ -0.25
PTPRU-202ENST00000373779 TECTAO75443 2155 aa13.48□□□□□ -0.25
PTPRU-202ENST00000373779 SLC25A20O43772 301 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms