RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 SIGLEC8Q9NYZ4 499 aa13.46□□□□□ -0.25
CTSA-204ENST00000372484 NCR2O95944 276 aa13.46□□□□□ -0.26
CTSA-204ENST00000372484 RNASE4P34096 147 aaKnown RBP13.46□□□□□ -0.26
CTSA-204ENST00000372484 LINC00173Q6ZV60 143 aa13.46□□□□□ -0.26
CTSA-204ENST00000372484 TRBV7-9A0A0J9YWB2 115 aa13.45□□□□□ -0.26
CTSA-204ENST00000372484 TMEM86BQ8N661 226 aa13.45□□□□□ -0.26
CTSA-204ENST00000372484 TIMM8BQ9Y5J9 83 aaPredicted RBP13.45□□□□□ -0.26
CTSA-204ENST00000372484 H3BVH4 76 aa13.45□□□□□ -0.26
CTSA-204ENST00000372484 NPYP01303 97 aa13.45□□□□□ -0.26
CTSA-204ENST00000372484 SPANXN1Q5VSR9 72 aa13.45□□□□□ -0.26
CTSA-204ENST00000372484 ATOH7Q8N100 152 aa13.45□□□□□ -0.26
CTSA-204ENST00000372484 SNAI2O43623 268 aa13.44□□□□□ -0.26
CTSA-204ENST00000372484 PPBPP02775 128 aa13.44□□□□□ -0.26
CTSA-204ENST00000372484 ZNF688P0C7X2 276 aa13.44□□□□□ -0.26
CTSA-204ENST00000372484 KIR3DS1Q14943 382 aa13.44□□□□□ -0.26
CTSA-204ENST00000372484 APRG1Q8IVJ8 170 aa13.44□□□□□ -0.26
CTSA-204ENST00000372484 EVI2AP22794 236 aa13.43□□□□□ -0.26
CTSA-204ENST00000372484 SNRPD3P62318 126 aaKnown RBP13.43□□□□□ -0.26
CTSA-204ENST00000372484 DEFB136Q30KP8 78 aa13.43□□□□□ -0.26
CTSA-204ENST00000372484 SPATA45Q537H7 98 aa13.43□□□□□ -0.26
CTSA-204ENST00000372484 PSMG4Q5JS54 123 aa13.43□□□□□ -0.26
CTSA-204ENST00000372484 C18orf65Q6ZTR6 163 aa13.43□□□□□ -0.26
CTSA-204ENST00000372484 SMIM15Q7Z3B0 74 aa13.43□□□□□ -0.26
CTSA-204ENST00000372484 HSPB8Q9UJY1 196 aa13.43□□□□□ -0.26
CTSA-204ENST00000372484 SYS1-DBNDD2H3BUS1 97 aa13.43□□□□□ -0.26
CTSA-204ENST00000372484 CRXO43186 299 aaPredicted RBP13.43□□□□□ -0.26
CTSA-204ENST00000372484 CACNG7P62955 275 aa13.43□□□□□ -0.26
CTSA-204ENST00000372484 TCF21O43680 179 aa13.42□□□□□ -0.26
CTSA-204ENST00000372484 ANXA2RQ3ZCQ2 193 aa13.42□□□□□ -0.26
CTSA-204ENST00000372484 SPATA12Q7Z6I5 190 aa13.42□□□□□ -0.26
CTSA-204ENST00000372484 MAP1LC3CQ9BXW4 147 aa13.42□□□□□ -0.26
CTSA-204ENST00000372484 UNC79Q9P2D8 2635 aa13.42□□□□□ -0.26
CTSA-204ENST00000372484 IGHV4-4A0A075B6R2 117 aa13.42□□□□□ -0.26
CTSA-204ENST00000372484 DNAJC9-AS1A6NH13 148 aa13.42□□□□□ -0.26
CTSA-204ENST00000372484 K7EQG2 157 aa13.42□□□□□ -0.26
CTSA-204ENST00000372484 S100A4P26447 101 aaKnown RBP13.42□□□□□ -0.26
CTSA-204ENST00000372484 SLURP1P55000 103 aa13.42□□□□□ -0.26
CTSA-204ENST00000372484 ACANP16112 2415 aa13.41□□□□□ -0.26
CTSA-204ENST00000372484 ASIPP42127 132 aa13.41□□□□□ -0.26
CTSA-204ENST00000372484 KHDC1LQ5JSQ8 128 aa13.41□□□□□ -0.26
CTSA-204ENST00000372484 ZNF705AQ6ZN79 300 aaPredicted RBP13.41□□□□□ -0.26
CTSA-204ENST00000372484 MIEN1Q9BRT3 115 aa13.41□□□□□ -0.26
CTSA-204ENST00000372484 NF1P21359 2839 aa13.41□□□□□ -0.26
CTSA-204ENST00000372484 KLLNB2CW77 178 aa13.4□□□□□ -0.26
CTSA-204ENST00000372484 GAS8-AS1O95177 125 aa13.4□□□□□ -0.26
CTSA-204ENST00000372484 LAMTOR2Q9Y2Q5 125 aa13.4□□□□□ -0.26
CTSA-204ENST00000372484 TCTEX1D4Q5JR98 221 aa13.4□□□□□ -0.26
CTSA-204ENST00000372484 WFDC12Q8WWY7 111 aa13.4□□□□□ -0.26
CTSA-204ENST00000372484 MAP1LC3AQ9H492 121 aa13.4□□□□□ -0.26
CTSA-204ENST00000372484 C20orf202A1L168 122 aa13.39□□□□□ -0.27
CTSA-204ENST00000372484 LINC01619G3V211 115 aa13.39□□□□□ -0.27
CTSA-204ENST00000372484 TNFRSF6BO95407 300 aa13.39□□□□□ -0.27
CTSA-204ENST00000372484 MAJINQ3KP22 176 aa13.39□□□□□ -0.27
CTSA-204ENST00000372484 Q6ZSV7 163 aa13.39□□□□□ -0.27
CTSA-204ENST00000372484 OR11H1Q8NG94 326 aa13.39□□□□□ -0.27
CTSA-204ENST00000372484 C4orf3Q8WVX3 66 aa13.39□□□□□ -0.27
CTSA-204ENST00000372484 FOXC2Q99958 501 aa13.39□□□□□ -0.27
CTSA-204ENST00000372484 SORL1Q92673 2214 aa13.39□□□□□ -0.27
CTSA-204ENST00000372484 DPF1Q92782 380 aa13.39□□□□□ -0.27
CTSA-204ENST00000372484 TRAV9-2A0A087WT02 112 aa13.38□□□□□ -0.27
CTSA-204ENST00000372484 A0A096LNJ9 63 aa13.38□□□□□ -0.27
CTSA-204ENST00000372484 A0A0J9YX75 114 aa13.38□□□□□ -0.27
CTSA-204ENST00000372484 OR4C46A6NHA9 309 aa13.38□□□□□ -0.27
CTSA-204ENST00000372484 H0Y8G0 127 aa13.38□□□□□ -0.27
CTSA-204ENST00000372484 M0R381 172 aa13.38□□□□□ -0.27
CTSA-204ENST00000372484 KRTAP1-1Q07627 177 aa13.38□□□□□ -0.27
CTSA-204ENST00000372484 ZNF747Q9BV97 191 aa13.38□□□□□ -0.27
CTSA-204ENST00000372484 YAE1D1Q9NRH1 226 aa13.38□□□□□ -0.27
CTSA-204ENST00000372484 PHLDA3Q9Y5J5 127 aa13.38□□□□□ -0.27
CTSA-204ENST00000372484 GNRH2O43555 120 aa13.37□□□□□ -0.27
CTSA-204ENST00000372484 CD5LO43866 347 aa13.37□□□□□ -0.27
CTSA-204ENST00000372484 GATA1P15976 413 aaPredicted RBP13.37□□□□□ -0.27
CTSA-204ENST00000372484 PET117Q6UWS5 81 aa13.37□□□□□ -0.27
CTSA-204ENST00000372484 ADAMTSL5Q6ZMM2 481 aa13.37□□□□□ -0.27
CTSA-204ENST00000372484 DUX3Q96PT4 197 aa13.37□□□□□ -0.27
CTSA-204ENST00000372484 AGRNO00468 2067 aa13.37□□□□□ -0.27
CTSA-204ENST00000372484 SPRY2O43597 315 aa13.37□□□□□ -0.27
CTSA-204ENST00000372484 KLHL30-AS1Q8NEE0 82 aa13.37□□□□□ -0.27
CTSA-204ENST00000372484 ESM1Q9NQ30 184 aa13.37□□□□□ -0.27
CTSA-204ENST00000372484 GCN1Q92616 2671 aaKnown RBP13.37□□□□□ -0.27
CTSA-204ENST00000372484 IGKV3-20P01619 116 aa13.36□□□□□ -0.27
CTSA-204ENST00000372484 MED14OSP0DP75 135 aa13.36□□□□□ -0.27
CTSA-204ENST00000372484 FXYD7P58549 80 aa13.36□□□□□ -0.27
CTSA-204ENST00000372484 FAM159AQ6UWV7 190 aa13.36□□□□□ -0.27
CTSA-204ENST00000372484 OR1N2Q8NGR9 330 aa13.36□□□□□ -0.27
CTSA-204ENST00000372484 TRAV26-2A0A0B4J265 109 aa13.36□□□□□ -0.27
CTSA-204ENST00000372484 HBDP02042 147 aa13.36□□□□□ -0.27
CTSA-204ENST00000372484 LEPP41159 167 aa13.36□□□□□ -0.27
CTSA-204ENST00000372484 ODF3Q96PU9 254 aa13.36□□□□□ -0.27
CTSA-204ENST00000372484 TRAV12-3A0A0B4J271 114 aa13.35□□□□□ -0.27
CTSA-204ENST00000372484 RNASE3P12724 160 aaKnown RBP13.35□□□□□ -0.27
CTSA-204ENST00000372484 OR2K2Q8NGT1 345 aa13.35□□□□□ -0.27
CTSA-204ENST00000372484 MCRIP2Q9BUT9 160 aaKnown RBP13.35□□□□□ -0.27
CTSA-204ENST00000372484 NXT2Q9NPJ8 142 aaKnown RBP13.35□□□□□ -0.27
CTSA-204ENST00000372484 SCRT2Q9NQ03 307 aa13.35□□□□□ -0.27
CTSA-204ENST00000372484 PEMTQ9UBM1 199 aa13.35□□□□□ -0.27
CTSA-204ENST00000372484 IGLC3P0DOY3 106 aa13.34□□□□□ -0.27
CTSA-204ENST00000372484 HIST2H2BDQ6DRA6 164 aa13.34□□□□□ -0.27
CTSA-204ENST00000372484 OR9G4Q8NGQ1 327 aa13.34□□□□□ -0.27
CTSA-204ENST00000372484 C7orf71A4D174 169 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms