RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 GAGE1Q13065 139 aa10.77□□□□□ -0.69
CTR9-201ENST00000361367 GAGE4Q13068 117 aa10.77□□□□□ -0.69
CTR9-201ENST00000361367 GAGE5Q13069 117 aa10.77□□□□□ -0.69
CTR9-201ENST00000361367 GAGE13Q4V321 117 aa10.77□□□□□ -0.69
CTR9-201ENST00000361367 LENEPQ9Y5L5 61 aa10.77□□□□□ -0.69
CTR9-201ENST00000361367 P0C879 139 aa10.76□□□□□ -0.69
CTR9-201ENST00000361367 ASPHD1Q5U4P2 390 aa10.76□□□□□ -0.69
CTR9-201ENST00000361367 IGHV3-64A0A075B6Q5 118 aa10.76□□□□□ -0.69
CTR9-201ENST00000361367 A8MWP6 167 aa10.76□□□□□ -0.69
CTR9-201ENST00000361367 LTAP01374 205 aa10.76□□□□□ -0.69
CTR9-201ENST00000361367 C16orf54Q6UWD8 224 aa10.76□□□□□ -0.69
CTR9-201ENST00000361367 APRG1Q8IVJ8 170 aa10.76□□□□□ -0.69
CTR9-201ENST00000361367 LYPD6BQ8NI32 183 aa10.76□□□□□ -0.69
CTR9-201ENST00000361367 C1orf229Q6ZS94 237 aaPredicted RBP10.75□□□□□ -0.69
CTR9-201ENST00000361367 GPHB5Q86YW7 130 aa10.75□□□□□ -0.69
CTR9-201ENST00000361367 C2orf70A6NJV1 201 aa10.75□□□□□ -0.69
CTR9-201ENST00000361367 CFHR4Q92496 578 aa10.75□□□□□ -0.69
CTR9-201ENST00000361367 LINC01548A6NM66 108 aa10.75□□□□□ -0.69
CTR9-201ENST00000361367 CITED2Q99967 270 aaPredicted RBP10.75□□□□□ -0.69
CTR9-201ENST00000361367 RBAKDNA6NC62 111 aa10.75□□□□□ -0.69
CTR9-201ENST00000361367 K7EMT4 169 aa10.75□□□□□ -0.69
CTR9-201ENST00000361367 APOMO95445 188 aa10.75□□□□□ -0.69
CTR9-201ENST00000361367 SMIM13P0DJ93 91 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 SEC11AP67812 179 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 C2CD3Q4AC94 2353 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 KIAA1549Q9HCM3 1950 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 WI2-2373I1.2A0A1W2PRP0 233 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 CIDEAO60543 219 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 RNASE1P07998 156 aaKnown RBP10.74□□□□□ -0.69
CTR9-201ENST00000361367 SPXQ9BT56 116 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 ARHGAP32A7KAX9 2087 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 TRAV13-1A0A0B4J241 112 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 A0A0U1RRA0 63 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 ZNF815PA8K554 130 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 PLA2G2AP14555 144 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 FAM167A-AS1Q96KT0 104 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 PYGO2Q9BRQ0 406 aa10.74□□□□□ -0.69
CTR9-201ENST00000361367 SMIM27A0A1W2PRY6 76 aa10.73□□□□□ -0.69
CTR9-201ENST00000361367 CD5LO43866 347 aa10.73□□□□□ -0.69
CTR9-201ENST00000361367 MRPL16Q9NX20 251 aaKnown RBP10.73□□□□□ -0.69
CTR9-201ENST00000361367 KMT2EQ8IZD2 1858 aa10.73□□□□□ -0.69
CTR9-201ENST00000361367 PKD1L2Q7Z442 2459 aa10.73□□□□□ -0.69
CTR9-201ENST00000361367 SDHAF1A6NFY7 115 aa10.73□□□□□ -0.69
CTR9-201ENST00000361367 MYCNOSP40205 109 aa10.73□□□□□ -0.69
CTR9-201ENST00000361367 GSN-AS1Q9NRJ2 163 aa10.73□□□□□ -0.69
CTR9-201ENST00000361367 Q6YL49 198 aa10.73□□□□□ -0.69
CTR9-201ENST00000361367 DNAL4O96015 105 aa10.72□□□□□ -0.69
CTR9-201ENST00000361367 TRBV12-3P01733 135 aa10.72□□□□□ -0.69
CTR9-201ENST00000361367 C3orf79P0CE67 100 aa10.72□□□□□ -0.69
CTR9-201ENST00000361367 EGR2P11161 476 aaPredicted RBP10.72□□□□□ -0.69
CTR9-201ENST00000361367 MRPL51Q4U2R6 128 aaKnown RBP10.72□□□□□ -0.69
CTR9-201ENST00000361367 C18orf32Q8TCD1 76 aa10.72□□□□□ -0.69
CTR9-201ENST00000361367 LOC105371267A0A1B0GV96 52 aa10.72□□□□□ -0.69
CTR9-201ENST00000361367 ZNRF2Q8NHG8 242 aa10.72□□□□□ -0.69
CTR9-201ENST00000361367 GNRH2O43555 120 aa10.72□□□□□ -0.69
CTR9-201ENST00000361367 K7EN84 100 aa10.72□□□□□ -0.69
CTR9-201ENST00000361367 UNQ9165/PRO28630Q6UXU0 137 aa10.72□□□□□ -0.69
CTR9-201ENST00000361367 TRAV26-2A0A0B4J265 109 aa10.71□□□□□ -0.69
CTR9-201ENST00000361367 C10orf91Q5T1B1 145 aa10.71□□□□□ -0.69
CTR9-201ENST00000361367 PLA2G2EQ9NZK7 142 aa10.71□□□□□ -0.69
CTR9-201ENST00000361367 EML5Q05BV3 1969 aa10.71□□□□□ -0.69
CTR9-201ENST00000361367 IGHG4P01861 327 aa10.71□□□□□ -0.69
CTR9-201ENST00000361367 TYMSP04818 313 aa10.71□□□□□ -0.69
CTR9-201ENST00000361367 CKS1BP61024 79 aa10.71□□□□□ -0.69
CTR9-201ENST00000361367 SLAQ13239 276 aa10.71□□□□□ -0.69
CTR9-201ENST00000361367 WIPF2Q8TF74 440 aaPredicted RBP10.71□□□□□ -0.69
CTR9-201ENST00000361367 C4orf3Q8WVX3 66 aa10.71□□□□□ -0.69
CTR9-201ENST00000361367 ZNF48Q96MX3 618 aaPredicted RBP10.71□□□□□ -0.69
CTR9-201ENST00000361367 INAFM1C9JVW0 142 aa10.71□□□□□ -0.7
CTR9-201ENST00000361367 PLNP26678 52 aa10.71□□□□□ -0.7
CTR9-201ENST00000361367 Q0VG73 95 aa10.71□□□□□ -0.7
CTR9-201ENST00000361367 TRBV7-9A0A0J9YWB2 115 aa10.7□□□□□ -0.7
CTR9-201ENST00000361367 LY6LH3BQJ8 138 aa10.7□□□□□ -0.7
CTR9-201ENST00000361367 NDUFS6O75380 124 aaKnown RBP10.7□□□□□ -0.7
CTR9-201ENST00000361367 MRAPQ8TCY5 172 aa10.7□□□□□ -0.7
CTR9-201ENST00000361367 SYS1-DBNDD2H3BUS1 97 aa10.7□□□□□ -0.7
CTR9-201ENST00000361367 C2orf66Q6UXQ4 117 aa10.7□□□□□ -0.7
CTR9-201ENST00000361367 C11orf1Q9H5F2 150 aa10.7□□□□□ -0.7
CTR9-201ENST00000361367 IGF1P05019 195 aa10.7□□□□□ -0.7
CTR9-201ENST00000361367 EBI3Q14213 229 aa10.7□□□□□ -0.7
CTR9-201ENST00000361367 M0R2P5 195 aa10.7□□□□□ -0.7
CTR9-201ENST00000361367 MORN3Q6PF18 240 aaPredicted RBP10.7□□□□□ -0.7
CTR9-201ENST00000361367 TP53TG1Q9Y2A0 90 aa10.7□□□□□ -0.7
CTR9-201ENST00000361367 NACAE9PAV3 2078 aa10.69□□□□□ -0.7
CTR9-201ENST00000361367 TRAV2A0A0B4J234 112 aa10.69□□□□□ -0.7
CTR9-201ENST00000361367 I3L3M4 83 aa10.69□□□□□ -0.7
CTR9-201ENST00000361367 NOP10Q9NPE3 64 aaKnown RBP10.69□□□□□ -0.7
CTR9-201ENST00000361367 TRBV25-1A0A075B6N4 114 aa10.69□□□□□ -0.7
CTR9-201ENST00000361367 EIF4EBP1Q13541 118 aaPredicted RBP10.69□□□□□ -0.7
CTR9-201ENST00000361367 C11orf68Q9H3H3 251 aaKnown RBP10.69□□□□□ -0.7
CTR9-201ENST00000361367 LINC00158P58513 81 aa10.69□□□□□ -0.7
CTR9-201ENST00000361367 DMRTA1Q5VZB9 504 aa10.69□□□□□ -0.7
CTR9-201ENST00000361367 ZC2HC1BQ5TFG8 222 aa10.68□□□□□ -0.7
CTR9-201ENST00000361367 TMEM61Q8N0U2 210 aa10.68□□□□□ -0.7
CTR9-201ENST00000361367 Q8N8P6 123 aa10.68□□□□□ -0.7
CTR9-201ENST00000361367 CCDC140Q96MF4 163 aa10.68□□□□□ -0.7
CTR9-201ENST00000361367 ZMAT4Q9H898 229 aa10.68□□□□□ -0.7
CTR9-201ENST00000361367 IGHV3-38A0A0C4DH36 116 aa10.68□□□□□ -0.7
CTR9-201ENST00000361367 PSCAO43653 123 aa10.68□□□□□ -0.7
CTR9-201ENST00000361367 RASL10AQ92737 203 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms