RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 LOXL1Q08397 574 aaPredicted RBP10.91□□□□□ -0.66
SMC5-201ENST00000361138 SPINK13Q1W4C9 94 aa10.91□□□□□ -0.66
SMC5-201ENST00000361138 MRPL36Q9P0J6 103 aaKnown RBP10.91□□□□□ -0.66
SMC5-201ENST00000361138 MSRB2Q9Y3D2 182 aa10.91□□□□□ -0.66
SMC5-201ENST00000361138 SRSF2Q01130 221 aaKnown RBP10.9□□□□□ -0.66
SMC5-201ENST00000361138 LINC00322Q6ZN03 302 aaPredicted RBP10.9□□□□□ -0.66
SMC5-201ENST00000361138 FER1L5A0AVI2 2057 aa10.9□□□□□ -0.66
SMC5-201ENST00000361138 CR1LQ2VPA4 569 aa10.9□□□□□ -0.66
SMC5-201ENST00000361138 RHOHQ15669 191 aa10.9□□□□□ -0.66
SMC5-201ENST00000361138 KNCNA6PVL3 124 aa10.9□□□□□ -0.66
SMC5-201ENST00000361138 PRSS33Q8NF86 280 aa10.9□□□□□ -0.66
SMC5-201ENST00000361138 MBD6Q96DN6 1003 aa10.9□□□□□ -0.67
SMC5-201ENST00000361138 BAALCQ8WXS3 180 aa10.89□□□□□ -0.67
SMC5-201ENST00000361138 SPANXCQ9NY87 97 aa10.89□□□□□ -0.67
SMC5-201ENST00000361138 TCTEX1D4Q5JR98 221 aa10.89□□□□□ -0.67
SMC5-201ENST00000361138 KLHL30-AS1Q8NEE0 82 aa10.89□□□□□ -0.67
SMC5-201ENST00000361138 TRAV12-2A0A075B6T6 113 aa10.89□□□□□ -0.67
SMC5-201ENST00000361138 ACYP1P07311 99 aa10.89□□□□□ -0.67
SMC5-201ENST00000361138 IGKV1D-37A0A075B6S9 117 aa10.89□□□□□ -0.67
SMC5-201ENST00000361138 E9PLD3 99 aa10.89□□□□□ -0.67
SMC5-201ENST00000361138 RUSC1-AS1Q66K80 236 aa10.89□□□□□ -0.67
SMC5-201ENST00000361138 C6orf226Q5I0X4 101 aa10.89□□□□□ -0.67
SMC5-201ENST00000361138 SMIM20Q8N5G0 67 aa10.89□□□□□ -0.67
SMC5-201ENST00000361138 MUSTN1Q8IVN3 82 aa10.88□□□□□ -0.67
SMC5-201ENST00000361138 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
SMC5-201ENST00000361138 NPBQ8NG41 125 aa10.88□□□□□ -0.67
SMC5-201ENST00000361138 JPT2Q9H910 190 aa10.88□□□□□ -0.67
SMC5-201ENST00000361138 LENEPQ9Y5L5 61 aa10.88□□□□□ -0.67
SMC5-201ENST00000361138 RHODO00212 210 aa10.88□□□□□ -0.67
SMC5-201ENST00000361138 FAM215AQ9Y5M1 114 aa10.88□□□□□ -0.67
SMC5-201ENST00000361138 ZDBF2Q9HCK1 2354 aa10.88□□□□□ -0.67
SMC5-201ENST00000361138 TEX22C9J3V5 150 aa10.87□□□□□ -0.67
SMC5-201ENST00000361138 PF4P02776 101 aa10.87□□□□□ -0.67
SMC5-201ENST00000361138 SPANXB1Q9NS25 103 aaPredicted RBP10.87□□□□□ -0.67
SMC5-201ENST00000361138 ICOSQ9Y6W8 199 aa10.87□□□□□ -0.67
SMC5-201ENST00000361138 A4D1N5 150 aa10.87□□□□□ -0.67
SMC5-201ENST00000361138 VWC2LB2RUY7 222 aa10.87□□□□□ -0.67
SMC5-201ENST00000361138 SPRY2O43597 315 aa10.87□□□□□ -0.67
SMC5-201ENST00000361138 RNASE13Q5GAN3 156 aaKnown RBP10.87□□□□□ -0.67
SMC5-201ENST00000361138 IGLV11-55A0A075B6I3 123 aa10.86□□□□□ -0.67
SMC5-201ENST00000361138 PRSS47A8MTI9 375 aa10.86□□□□□ -0.67
SMC5-201ENST00000361138 SUMO4Q6EEV6 95 aa10.86□□□□□ -0.67
SMC5-201ENST00000361138 TRAV13-2A0A0B4J235 113 aa10.86□□□□□ -0.67
SMC5-201ENST00000361138 ZFP2Q6ZN57 461 aa10.86□□□□□ -0.67
SMC5-201ENST00000361138 DOCK8Q8NF50 2099 aa10.86□□□□□ -0.67
SMC5-201ENST00000361138 IGHV3-16A0A0C4DH30 117 aa10.86□□□□□ -0.67
SMC5-201ENST00000361138 IGHV3-38A0A0C4DH36 116 aa10.86□□□□□ -0.67
SMC5-201ENST00000361138 SYNJ2BPP57105 145 aa10.86□□□□□ -0.67
SMC5-201ENST00000361138 MLST8Q9BVC4 326 aa10.86□□□□□ -0.67
SMC5-201ENST00000361138 LINC01620Q4KN68 170 aa10.86□□□□□ -0.67
SMC5-201ENST00000361138 BPESC1Q9GZL8 116 aa10.85□□□□□ -0.67
SMC5-201ENST00000361138 HERVK_113P63121 156 aa10.85□□□□□ -0.67
SMC5-201ENST00000361138 IGFL3Q6UXB1 125 aa10.85□□□□□ -0.67
SMC5-201ENST00000361138 IGHV7-4-1A0A0J9YVY3 117 aa10.85□□□□□ -0.67
SMC5-201ENST00000361138 PIFOQ8TCI5 191 aa10.85□□□□□ -0.67
SMC5-201ENST00000361138 TMEM126AQ9H061 195 aa10.85□□□□□ -0.67
SMC5-201ENST00000361138 DEFB131AP59861 70 aa10.85□□□□□ -0.67
SMC5-201ENST00000361138 CRYGCP07315 174 aa10.84□□□□□ -0.67
SMC5-201ENST00000361138 BAALC-AS2P0C853 105 aa10.84□□□□□ -0.67
SMC5-201ENST00000361138 HOXB4P17483 251 aaPredicted RBP10.84□□□□□ -0.67
SMC5-201ENST00000361138 Q6ZUT4 128 aa10.84□□□□□ -0.67
SMC5-201ENST00000361138 DIDO1Q9BTC0 2240 aaKnown RBP10.84□□□□□ -0.67
SMC5-201ENST00000361138 F6UB75 175 aa10.84□□□□□ -0.67
SMC5-201ENST00000361138 UBE2E2Q96LR5 201 aa10.84□□□□□ -0.67
SMC5-201ENST00000361138 PRAC2D3DTV9 90 aa10.83□□□□□ -0.68
SMC5-201ENST00000361138 PROP1O75360 226 aa10.83□□□□□ -0.68
SMC5-201ENST00000361138 CTSGP08311 255 aa10.83□□□□□ -0.68
SMC5-201ENST00000361138 PTH2Q96A98 100 aa10.83□□□□□ -0.68
SMC5-201ENST00000361138 SVILO95425 2214 aa10.83□□□□□ -0.68
SMC5-201ENST00000361138 ESPL1Q14674 2120 aa10.83□□□□□ -0.68
SMC5-201ENST00000361138 LTBP2Q14767 1821 aa10.83□□□□□ -0.68
SMC5-201ENST00000361138 Q8N976 141 aa10.83□□□□□ -0.68
SMC5-201ENST00000361138 RNF183Q96D59 192 aa10.83□□□□□ -0.68
SMC5-201ENST00000361138 SHANK1Q9Y566 2161 aa10.83□□□□□ -0.68
SMC5-201ENST00000361138 CMC4P56277 68 aaPredicted RBP10.82□□□□□ -0.68
SMC5-201ENST00000361138 SS18Q15532 418 aa10.82□□□□□ -0.68
SMC5-201ENST00000361138 C11orf86A6NJI1 115 aa10.82□□□□□ -0.68
SMC5-201ENST00000361138 LINC00310P59036 64 aa10.82□□□□□ -0.68
SMC5-201ENST00000361138 C1orf229Q6ZS94 237 aaPredicted RBP10.82□□□□□ -0.68
SMC5-201ENST00000361138 NDUFA11Q86Y39 141 aa10.82□□□□□ -0.68
SMC5-201ENST00000361138 FAM186AA6NE01 2351 aa10.82□□□□□ -0.68
SMC5-201ENST00000361138 TRBV10-2A0A0K0K1G8 114 aa10.82□□□□□ -0.68
SMC5-201ENST00000361138 TM2D2Q9BX73 214 aa10.82□□□□□ -0.68
SMC5-201ENST00000361138 IGFBPL1Q8WX77 278 aa10.82□□□□□ -0.68
SMC5-201ENST00000361138 TCL1BO95988 128 aa10.81□□□□□ -0.68
SMC5-201ENST00000361138 IGHV1-69P01742 117 aa10.81□□□□□ -0.68
SMC5-201ENST00000361138 MT-ATP8P03928 68 aa10.81□□□□□ -0.68
SMC5-201ENST00000361138 C2orf91Q6ZV80 131 aa10.81□□□□□ -0.68
SMC5-201ENST00000361138 ARHGAP21Q5T5U3 1957 aa10.81□□□□□ -0.68
SMC5-201ENST00000361138 UBL5Q9BZL1 73 aa10.81□□□□□ -0.68
SMC5-201ENST00000361138 PLA2G2CQ5R387 149 aa10.81□□□□□ -0.68
SMC5-201ENST00000361138 HEATR1Q9H583 2144 aaKnown RBP10.81□□□□□ -0.68
SMC5-201ENST00000361138 NCKAP5O14513 1909 aa10.81□□□□□ -0.68
SMC5-201ENST00000361138 HTN3P15516 51 aa10.81□□□□□ -0.68
SMC5-201ENST00000361138 C9orf47Q6ZRZ4 202 aa10.81□□□□□ -0.68
SMC5-201ENST00000361138 ZNRF2Q8NHG8 242 aa10.81□□□□□ -0.68
SMC5-201ENST00000361138 PI4KAP42356 2102 aa10.81□□□□□ -0.68
SMC5-201ENST00000361138 MUC22E2RYF6 1773 aaPredicted RBP10.81□□□□□ -0.68
SMC5-201ENST00000361138 BUB3O43684 328 aa10.8□□□□□ -0.68
SMC5-201ENST00000361138 PFN2P35080 140 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms