RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 C12orf54Q6X4T0 127 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 TMEM158Q8WZ71 300 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 GNB1LQ9BYB4 327 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 NAGKQ9UJ70 344 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 TRAV12-3A0A0B4J271 114 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 ARMS2P0C7Q2 107 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 SHISA2Q6UWI4 295 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 TMEM136Q6ZRR5 245 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 FER1L6-AS1Q8NA97 138 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 CLUHP3Q96NS8 147 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 TRAPPC1Q9Y5R8 145 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 SNURFLB1AK76 121 aa17.08■□□□□ 0.33
SDF4-202ENST00000360001 FABP9Q0Z7S8 132 aa17.08■□□□□ 0.33
SDF4-202ENST00000360001 ANXA2RQ3ZCQ2 193 aa17.08■□□□□ 0.33
SDF4-202ENST00000360001 A0A1B0GUT8 65 aa17.08■□□□□ 0.32
SDF4-202ENST00000360001 CTRLP40313 264 aa17.08■□□□□ 0.32
SDF4-202ENST00000360001 FXYD7P58549 80 aa17.08■□□□□ 0.32
SDF4-202ENST00000360001 COX19Q49B96 90 aa17.08■□□□□ 0.32
SDF4-202ENST00000360001 MUC21Q5SSG8 566 aa17.08■□□□□ 0.32
SDF4-202ENST00000360001 WDR73Q6P4I2 378 aa17.08■□□□□ 0.32
SDF4-202ENST00000360001 FRZBQ92765 325 aa17.08■□□□□ 0.32
SDF4-202ENST00000360001 HBBP68871 147 aa17.07■□□□□ 0.32
SDF4-202ENST00000360001 CRXO43186 299 aaPredicted RBP17.06■□□□□ 0.32
SDF4-202ENST00000360001 CAMPP49913 170 aa17.06■□□□□ 0.32
SDF4-202ENST00000360001 STHQ8IWL8 128 aa17.06■□□□□ 0.32
SDF4-202ENST00000360001 MCRIP2Q9BUT9 160 aaKnown RBP17.06■□□□□ 0.32
SDF4-202ENST00000360001 COL6A5A8TX70 2615 aa17.06■□□□□ 0.32
SDF4-202ENST00000360001 WFDC10AQ9H1F0 79 aa17.06■□□□□ 0.32
SDF4-202ENST00000360001 MT-ND6P03923 174 aa17.05■□□□□ 0.32
SDF4-202ENST00000360001 RAB4BP61018 213 aa17.05■□□□□ 0.32
SDF4-202ENST00000360001 TRPT1Q86TN4 253 aaKnown RBP17.05■□□□□ 0.32
SDF4-202ENST00000360001 MRPL18Q9H0U6 180 aaKnown RBP17.05■□□□□ 0.32
SDF4-202ENST00000360001 HIST1H2BKO60814 126 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 HIST1H2BJP06899 126 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 TRGC1P0CF51 173 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 HIST1H2BOP23527 126 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 HIST1H2BBP33778 126 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 HIST1H2BDP58876 126 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 HIST1H2BCP62807 126 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 RIGQ13278 110 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 HIST2H2BEQ16778 126 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.04■□□□□ 0.32
SDF4-202ENST00000360001 HIST1H2BHQ93079 126 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 BORCS7Q96B45 105 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 HIST1H2BNQ99877 126 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 HIST1H2BMQ99879 126 aa17.04■□□□□ 0.32
SDF4-202ENST00000360001 MUC21A0A0G2JKD1 596 aa17.03■□□□□ 0.32
SDF4-202ENST00000360001 MUC21A0A140T8X8 626 aa17.03■□□□□ 0.32
SDF4-202ENST00000360001 HLA-DQA1P01909 254 aa17.03■□□□□ 0.32
SDF4-202ENST00000360001 IGLL1P15814 213 aa17.03■□□□□ 0.32
SDF4-202ENST00000360001 F2Z2F3 143 aa17.02■□□□□ 0.32
SDF4-202ENST00000360001 RBMY1A1P0DJD3 496 aaKnown RBP17.02■□□□□ 0.32
SDF4-202ENST00000360001 RBMY1CP0DJD4 496 aa17.02■□□□□ 0.32
SDF4-202ENST00000360001 RBMY1FQ15415 496 aaKnown RBP17.02■□□□□ 0.32
SDF4-202ENST00000360001 FAM159AQ6UWV7 190 aa17.02■□□□□ 0.32
SDF4-202ENST00000360001 SSBP4Q9BWG4 385 aaPredicted RBP17.02■□□□□ 0.32
SDF4-202ENST00000360001 CNFNQ9BYD5 112 aa17.02■□□□□ 0.32
SDF4-202ENST00000360001 GNRH2O43555 120 aa17.02■□□□□ 0.31
SDF4-202ENST00000360001 TDRG1Q3Y452 100 aa17.02■□□□□ 0.31
SDF4-202ENST00000360001 A0A1B0GW15 77 aa17.01■□□□□ 0.31
SDF4-202ENST00000360001 H3BVH4 76 aa17■□□□□ 0.31
SDF4-202ENST00000360001 WIPF1O43516 503 aa17■□□□□ 0.31
SDF4-202ENST00000360001 SNAI2O43623 268 aa17■□□□□ 0.31
SDF4-202ENST00000360001 OR5AL1P0C617 328 aa17■□□□□ 0.31
SDF4-202ENST00000360001 SSTP61278 116 aa17■□□□□ 0.31
SDF4-202ENST00000360001 SLAQ13239 276 aa17■□□□□ 0.31
SDF4-202ENST00000360001 KCNS1Q96KK3 526 aa17■□□□□ 0.31
SDF4-202ENST00000360001 ASIPP42127 132 aa17■□□□□ 0.31
SDF4-202ENST00000360001 DNLZQ5SXM8 178 aa17■□□□□ 0.31
SDF4-202ENST00000360001 PRR31Q5SQ13 230 aa16.99■□□□□ 0.31
SDF4-202ENST00000360001 GATD1Q8NB37 220 aa16.99■□□□□ 0.31
SDF4-202ENST00000360001 IGHV1OR15-1A0A075B7D0 117 aa16.98■□□□□ 0.31
SDF4-202ENST00000360001 APCSP02743 223 aa16.98■□□□□ 0.31
SDF4-202ENST00000360001 NTF3P20783 257 aa16.98■□□□□ 0.31
SDF4-202ENST00000360001 RNASE3P12724 160 aaKnown RBP16.98■□□□□ 0.31
SDF4-202ENST00000360001 S100A4P26447 101 aaKnown RBP16.98■□□□□ 0.31
SDF4-202ENST00000360001 OR10AG1Q8NH19 301 aa16.98■□□□□ 0.31
SDF4-202ENST00000360001 S100A8P05109 93 aa16.97■□□□□ 0.31
SDF4-202ENST00000360001 GTSCR1Q86UQ5 136 aa16.97■□□□□ 0.31
SDF4-202ENST00000360001 DEFB125Q8N687 156 aa16.97■□□□□ 0.31
SDF4-202ENST00000360001 MSRB1Q9NZV6 116 aa16.97■□□□□ 0.31
SDF4-202ENST00000360001 TP53TG3Q9ULZ0 132 aa16.97■□□□□ 0.31
SDF4-202ENST00000360001 AMBPP02760 352 aa16.97■□□□□ 0.31
SDF4-202ENST00000360001 MED14OSP0DP75 135 aa16.97■□□□□ 0.31
SDF4-202ENST00000360001 TWIST1Q15672 202 aa16.97■□□□□ 0.31
SDF4-202ENST00000360001 KIAA1644Q3SXP7 199 aa16.97■□□□□ 0.31
SDF4-202ENST00000360001 SCRT2Q9NQ03 307 aa16.97■□□□□ 0.31
SDF4-202ENST00000360001 XCL2Q9UBD3 114 aa16.97■□□□□ 0.31
SDF4-202ENST00000360001 ZNF493Q6ZR52 646 aa16.96■□□□□ 0.31
SDF4-202ENST00000360001 TIMM8BQ9Y5J9 83 aaPredicted RBP16.96■□□□□ 0.31
SDF4-202ENST00000360001 CMYA5Q8N3K9 4069 aa16.96■□□□□ 0.31
SDF4-202ENST00000360001 INSP01308 110 aa16.95■□□□□ 0.3
SDF4-202ENST00000360001 NUTF2P61970 127 aaKnown RBP16.95■□□□□ 0.3
SDF4-202ENST00000360001 Q8N1Y9 231 aa16.95■□□□□ 0.3
SDF4-202ENST00000360001 IGHV4-4A0A075B6R2 117 aa16.95■□□□□ 0.3
SDF4-202ENST00000360001 C20orf144Q9BQM9 153 aa16.95■□□□□ 0.3
SDF4-202ENST00000360001 IGHV3-16A0A0C4DH30 117 aa16.94■□□□□ 0.3
SDF4-202ENST00000360001 SPRY2O43597 315 aa16.93■□□□□ 0.3
SDF4-202ENST00000360001 S100A6P06703 90 aa16.93■□□□□ 0.3
SDF4-202ENST00000360001 GIG44P09565 113 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms