RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 FABP2P12104 132 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 MRPL16Q9NX20 251 aaKnown RBP10.66□□□□□ -0.7
SMC6-201ENST00000351948 INAFM1C9JVW0 142 aa10.65□□□□□ -0.7
SMC6-201ENST00000351948 NPC2P61916 151 aa10.65□□□□□ -0.7
SMC6-201ENST00000351948 C11orf71Q6IPW1 123 aa10.65□□□□□ -0.7
SMC6-201ENST00000351948 V9GYV3 84 aa10.65□□□□□ -0.7
SMC6-201ENST00000351948 UNQ9165/PRO28630Q6UXU0 137 aa10.65□□□□□ -0.7
SMC6-201ENST00000351948 LOC105371267A0A1B0GV96 52 aa10.65□□□□□ -0.7
SMC6-201ENST00000351948 GSN-AS1Q9NRJ2 163 aa10.65□□□□□ -0.71
SMC6-201ENST00000351948 ACANP16112 2415 aa10.64□□□□□ -0.71
SMC6-201ENST00000351948 IGKCP01834 107 aa10.64□□□□□ -0.71
SMC6-201ENST00000351948 IGHG2P01859 326 aa10.64□□□□□ -0.71
SMC6-201ENST00000351948 OR5A1Q8NGJ0 315 aa10.64□□□□□ -0.71
SMC6-201ENST00000351948 ZNF492Q9P255 531 aa10.64□□□□□ -0.71
SMC6-201ENST00000351948 LY6G5BQ8NDX9 201 aa10.64□□□□□ -0.71
SMC6-201ENST00000351948 K7EN84 100 aa10.64□□□□□ -0.71
SMC6-201ENST00000351948 SLAQ13239 276 aa10.64□□□□□ -0.71
SMC6-201ENST00000351948 FANCD2OSQ96PS1 177 aa10.64□□□□□ -0.71
SMC6-201ENST00000351948 KRTAP10-9P60411 292 aa10.63□□□□□ -0.71
SMC6-201ENST00000351948 hDV102S1A0JD36 115 aa10.63□□□□□ -0.71
SMC6-201ENST00000351948 BUB3O43684 328 aa10.63□□□□□ -0.71
SMC6-201ENST00000351948 TRAV2A0A0B4J234 112 aa10.63□□□□□ -0.71
SMC6-201ENST00000351948 A6NDX4 124 aa10.63□□□□□ -0.71
SMC6-201ENST00000351948 ZNF815PA8K554 130 aa10.63□□□□□ -0.71
SMC6-201ENST00000351948 GP9P14770 177 aa10.63□□□□□ -0.71
SMC6-201ENST00000351948 RASL11AQ6T310 242 aa10.63□□□□□ -0.71
SMC6-201ENST00000351948 PRAC2D3DTV9 90 aa10.62□□□□□ -0.71
SMC6-201ENST00000351948 PET117Q6UWS5 81 aa10.62□□□□□ -0.71
SMC6-201ENST00000351948 ZNRF2Q8NHG8 242 aa10.62□□□□□ -0.71
SMC6-201ENST00000351948 ODF3BA8MYP8 253 aa10.62□□□□□ -0.71
SMC6-201ENST00000351948 CIDEAO60543 219 aa10.62□□□□□ -0.71
SMC6-201ENST00000351948 EGR2P11161 476 aaPredicted RBP10.62□□□□□ -0.71
SMC6-201ENST00000351948 WIPF2Q8TF74 440 aaPredicted RBP10.62□□□□□ -0.71
SMC6-201ENST00000351948 TRAV9-2A0A087WT02 112 aa10.62□□□□□ -0.71
SMC6-201ENST00000351948 UBE2CO00762 179 aa10.62□□□□□ -0.71
SMC6-201ENST00000351948 C3orf79P0CE67 100 aa10.62□□□□□ -0.71
SMC6-201ENST00000351948 FAM104BQ5XKR9 115 aa10.62□□□□□ -0.71
SMC6-201ENST00000351948 TEX43Q6ZNM6 134 aa10.62□□□□□ -0.71
SMC6-201ENST00000351948 CFHR4Q92496 578 aa10.62□□□□□ -0.71
SMC6-201ENST00000351948 GFRA4Q9GZZ7 299 aa10.62□□□□□ -0.71
SMC6-201ENST00000351948 NOP10Q9NPE3 64 aaKnown RBP10.62□□□□□ -0.71
SMC6-201ENST00000351948 PRSS46E5RG02 174 aa10.61□□□□□ -0.71
SMC6-201ENST00000351948 ATP6V0BQ99437 205 aa10.61□□□□□ -0.71
SMC6-201ENST00000351948 TNFRSF13BO14836 293 aaPredicted RBP10.61□□□□□ -0.71
SMC6-201ENST00000351948 SMIM12Q96EX1 92 aa10.61□□□□□ -0.71
SMC6-201ENST00000351948 UNC80Q8N2C7 3258 aa10.61□□□□□ -0.71
SMC6-201ENST00000351948 CRYGCP07315 174 aa10.61□□□□□ -0.71
SMC6-201ENST00000351948 C10orf99Q6UWK7 81 aa10.61□□□□□ -0.71
SMC6-201ENST00000351948 C11orf52Q96A22 123 aa10.61□□□□□ -0.71
SMC6-201ENST00000351948 MRPL51Q4U2R6 128 aaKnown RBP10.61□□□□□ -0.71
SMC6-201ENST00000351948 EML5Q05BV3 1969 aa10.6□□□□□ -0.71
SMC6-201ENST00000351948 C2orf70A6NJV1 201 aa10.6□□□□□ -0.71
SMC6-201ENST00000351948 APOC4P55056 127 aa10.6□□□□□ -0.71
SMC6-201ENST00000351948 FOXI2Q6ZQN5 318 aa10.6□□□□□ -0.71
SMC6-201ENST00000351948 A0A0J9YY99 117 aa10.6□□□□□ -0.71
SMC6-201ENST00000351948 SDHAF1A6NFY7 115 aa10.6□□□□□ -0.71
SMC6-201ENST00000351948 SMIM13P0DJ93 91 aa10.6□□□□□ -0.71
SMC6-201ENST00000351948 C18orf32Q8TCD1 76 aa10.6□□□□□ -0.71
SMC6-201ENST00000351948 NHP2Q9NX24 153 aaKnown RBP10.6□□□□□ -0.71
SMC6-201ENST00000351948 A0A1W2PPR1 153 aa10.59□□□□□ -0.71
SMC6-201ENST00000351948 SPXQ9BT56 116 aa10.59□□□□□ -0.71
SMC6-201ENST00000351948 TP53TG1Q9Y2A0 90 aa10.59□□□□□ -0.71
SMC6-201ENST00000351948 TRBV7-9A0A0J9YWB2 115 aa10.59□□□□□ -0.71
SMC6-201ENST00000351948 LTAP01374 205 aa10.59□□□□□ -0.71
SMC6-201ENST00000351948 ESM1Q9NQ30 184 aa10.59□□□□□ -0.71
SMC6-201ENST00000351948 LINC00158P58513 81 aa10.59□□□□□ -0.71
SMC6-201ENST00000351948 LBHQ53QV2 105 aaPredicted RBP10.59□□□□□ -0.71
SMC6-201ENST00000351948 TRPT1Q86TN4 253 aaKnown RBP10.59□□□□□ -0.71
SMC6-201ENST00000351948 FAM167A-AS1Q96KT0 104 aa10.59□□□□□ -0.71
SMC6-201ENST00000351948 TYMSP04818 313 aa10.58□□□□□ -0.72
SMC6-201ENST00000351948 PLA2G2AP14555 144 aa10.58□□□□□ -0.72
SMC6-201ENST00000351948 ZNF625Q96I27 306 aaPredicted RBP10.58□□□□□ -0.72
SMC6-201ENST00000351948 IGF2BP2-AS1Q96M15 143 aa10.58□□□□□ -0.72
SMC6-201ENST00000351948 LINC00574Q9H8X3 128 aa10.58□□□□□ -0.72
SMC6-201ENST00000351948 CLPSL1A2RUU4 121 aa10.58□□□□□ -0.72
SMC6-201ENST00000351948 A8MWP6 167 aa10.58□□□□□ -0.72
SMC6-201ENST00000351948 COPS9Q8WXC6 57 aa10.58□□□□□ -0.72
SMC6-201ENST00000351948 CT83Q5H943 113 aa10.58□□□□□ -0.72
SMC6-201ENST00000351948 ZC2HC1BQ5TFG8 222 aa10.58□□□□□ -0.72
SMC6-201ENST00000351948 A0A1B0GV90 55 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 CKS1BP61024 79 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 C16orf54Q6UWD8 224 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 DEFB4AO15263 64 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 PSCAO43653 123 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 NPYP01303 97 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 FAM231DQ6ZW35 169 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 TMEM61Q8N0U2 210 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 BBC3Q96PG8 261 aaPredicted RBP10.57□□□□□ -0.72
SMC6-201ENST00000351948 SPAG8Q99932 426 aaPredicted RBP10.57□□□□□ -0.72
SMC6-201ENST00000351948 DNAL4O96015 105 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 RNASE13Q5GAN3 156 aaKnown RBP10.57□□□□□ -0.72
SMC6-201ENST00000351948 C2orf66Q6UXQ4 117 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 U3KQE9 123 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 RHODO00212 210 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 GAGE6Q13070 117 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 LRRC75A-AS1Q8N1F1 130 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 DLX4Q92988 240 aaPredicted RBP10.57□□□□□ -0.72
SMC6-201ENST00000351948 CCDC140Q96MF4 163 aa10.57□□□□□ -0.72
SMC6-201ENST00000351948 LINC00587B1AMM8 73 aa10.56□□□□□ -0.72
SMC6-201ENST00000351948 STPG4Q8N801 248 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms