RNA–Protein interactions for RNA: ENST00000348332.7

NCOA1-202, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NCOA1, Length 6,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-202ENST00000348332 SHANK1Q9Y566 2161 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 IGHV1OR15-1A0A075B7D0 117 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 A8MWV9 139 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 SOCS3O14543 225 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 IGHV2-5P01817 119 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 C1QCP02747 245 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 FOXI1Q12951 378 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 C11orf71Q6IPW1 123 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 MRPL27Q9P0M9 148 aaKnown RBP3.32□□□□□ -1.88
NCOA1-202ENST00000348332 HLA-DQB1P01920 261 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 IGHV4-38-2P0DP08 117 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 MPZP25189 248 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 NANOS3P60323 173 aaKnown RBP3.32□□□□□ -1.88
NCOA1-202ENST00000348332 C5orf24Q7Z6I8 188 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 ZNF295-AS1Q8N0V1 137 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 SMIM8Q96KF7 97 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 Q96M66 194 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 EPDR1Q9UM22 224 aa3.32□□□□□ -1.88
NCOA1-202ENST00000348332 ANKRD11Q6UB99 2663 aaPredicted RBP3.31□□□□□ -1.88
NCOA1-202ENST00000348332 PROP1O75360 226 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 PLA2G1BP04054 148 aaKnown RBP3.31□□□□□ -1.88
NCOA1-202ENST00000348332 FUSP35637 526 aaKnown RBP eCLIP3.31□□□□□ -1.88
NCOA1-202ENST00000348332 ATP6V0E2Q8NHE4 81 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 IGKV2D-26A0A0A0MRZ7 120 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 K7ERS5 55 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 TRACP01848 142 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 CRYGDP07320 174 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 OCIAD2Q56VL3 154 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 BOD1L2Q8IYS8 172 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.31□□□□□ -1.88
NCOA1-202ENST00000348332 TSKUQ8WUA8 353 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 HS3ST6Q96QI5 342 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 OVOL2Q9BRP0 275 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 RNASE7Q9H1E1 156 aaKnown RBP3.31□□□□□ -1.88
NCOA1-202ENST00000348332 IGKV1D-43A0A0B4J1Z2 117 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 TRAV26-2A0A0B4J265 109 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 A0A1B0GWJ7 208 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 IGHV2-70P01814 119 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 C1orf100Q5SVJ3 147 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 XAF1Q6GPH4 301 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 LINC01551Q86U37 167 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 LINC00337Q8N6G1 96 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 RNF5Q99942 180 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 PNRC2Q9NPJ4 139 aaKnown RBP3.31□□□□□ -1.88
NCOA1-202ENST00000348332 MED12LQ86YW9 2145 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 TINCRA0A1B0GVN0 87 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 IGKCP01834 107 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 IGHG4P01861 327 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 LINC00299Q6ZSB3 139 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 TMEM242Q9NWH2 141 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 LY96Q9Y6Y9 160 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 PRR14LQ5THK1 2151 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 DOCK11Q5JSL3 2073 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 PRYO14603 147 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 DEFB125Q8N687 156 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 C14orf144Q96I85 54 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 PKD1L2Q7Z442 2459 aa3.31□□□□□ -1.88
NCOA1-202ENST00000348332 TRBV5-7A0A0A0MS05 114 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 MAJINQ3KP22 176 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 C2orf82Q6UX34 121 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 SLC25A48Q6ZT89 311 aaKnown RBP3.3□□□□□ -1.88
NCOA1-202ENST00000348332 SH2D6Q7Z4S9 175 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 FBLN5Q9UBX5 448 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 TRAV8-1A0A0A6YYK1 113 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 TRAV3A0A0B4J244 114 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 DNAJC9-AS1A6NH13 148 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 IGLV2-11P01706 119 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 ARMS2P0C7Q2 107 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 TMEM258P61165 79 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 LBHQ53QV2 105 aaPredicted RBP3.3□□□□□ -1.88
NCOA1-202ENST00000348332 WFDC9Q8NEX5 89 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 IFT22Q9H7X7 185 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 TRAV1-1A0A0B4J248 108 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 SH2D1AO60880 128 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 HIGD2BQ4VC39 106 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 FGFBP3Q8TAT2 258 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 GAFA1Q96PS6 74 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 IMMP2LQ96T52 175 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 V9GYH0 126 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 A0A1B0GW15 77 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 COX7A2LO14548 114 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 MYCNOSP40205 109 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 Q6ZSR3 168 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 KLHDC3Q9BQ90 382 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 ZNRD1Q9P1U0 126 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 HHLA3Q9XRX5 114 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 OR11H6Q8NGC7 330 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 IGFBPL1Q8WX77 278 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 I3L3M4 83 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 C16orf74Q96GX8 76 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 UBL5Q9BZL1 73 aa3.3□□□□□ -1.88
NCOA1-202ENST00000348332 PRRC2AP48634 2157 aaKnown RBP3.29□□□□□ -1.88
NCOA1-202ENST00000348332 PCSK5Q92824 1860 aa3.29□□□□□ -1.88
NCOA1-202ENST00000348332 A0A1B0GTI1 187 aa3.29□□□□□ -1.88
NCOA1-202ENST00000348332 LOXP28300 417 aaPredicted RBP3.29□□□□□ -1.88
NCOA1-202ENST00000348332 LYZL1Q6UWQ5 148 aa3.29□□□□□ -1.88
NCOA1-202ENST00000348332 VSIRQ9H7M9 311 aa3.29□□□□□ -1.88
NCOA1-202ENST00000348332 CYTL1Q9NRR1 136 aa3.29□□□□□ -1.88
NCOA1-202ENST00000348332 POLR3KQ9Y2Y1 108 aaPredicted RBP3.29□□□□□ -1.88
NCOA1-202ENST00000348332 MYO18BQ8IUG5 2567 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms