RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 ZNF56Q15929 161 aa12.53□□□□□ -0.4
MBD1-204ENST00000347968 THBDP07204 575 aa12.53□□□□□ -0.4
MBD1-204ENST00000347968 VMA21Q3ZAQ7 101 aa12.53□□□□□ -0.4
MBD1-204ENST00000347968 SBSPONQ8IVN8 264 aa12.53□□□□□ -0.4
MBD1-204ENST00000347968 MRPS12O15235 138 aaKnown RBP12.52□□□□□ -0.4
MBD1-204ENST00000347968 IGHV3-23P01764 117 aa12.52□□□□□ -0.4
MBD1-204ENST00000347968 Q1RN00 199 aa12.52□□□□□ -0.4
MBD1-204ENST00000347968 TRAV2A0A0B4J234 112 aa12.52□□□□□ -0.41
MBD1-204ENST00000347968 IGHV1-18A0A0C4DH31 117 aa12.52□□□□□ -0.41
MBD1-204ENST00000347968 IGKV3-15P01624 115 aa12.52□□□□□ -0.41
MBD1-204ENST00000347968 LYRM7Q5U5X0 104 aa12.52□□□□□ -0.41
MBD1-204ENST00000347968 FDCSPQ8NFU4 85 aa12.52□□□□□ -0.41
MBD1-204ENST00000347968 SVEP1Q4LDE5 3571 aa12.51□□□□□ -0.41
MBD1-204ENST00000347968 C10orf126Q8N4M7 172 aa12.51□□□□□ -0.41
MBD1-204ENST00000347968 RELNP78509 3460 aa12.51□□□□□ -0.41
MBD1-204ENST00000347968 PCNX1Q96RV3 2341 aa12.51□□□□□ -0.41
MBD1-204ENST00000347968 LINC01587Q99440 93 aa12.51□□□□□ -0.41
MBD1-204ENST00000347968 TRBV6-1A0A0K0K1D8 114 aa12.51□□□□□ -0.41
MBD1-204ENST00000347968 MDS2Q8NDY4 140 aa12.51□□□□□ -0.41
MBD1-204ENST00000347968 CFHR4Q92496 578 aa12.51□□□□□ -0.41
MBD1-204ENST00000347968 RNF125Q96EQ8 232 aa12.51□□□□□ -0.41
MBD1-204ENST00000347968 H3BRN7 92 aa12.5□□□□□ -0.41
MBD1-204ENST00000347968 ASIPP42127 132 aa12.5□□□□□ -0.41
MBD1-204ENST00000347968 DUX3Q96PT4 197 aa12.5□□□□□ -0.41
MBD1-204ENST00000347968 C14orf178Q8N769 122 aaPredicted RBP12.5□□□□□ -0.41
MBD1-204ENST00000347968 NRACQ8N912 160 aa12.5□□□□□ -0.41
MBD1-204ENST00000347968 OR10J6PQ8NGY7 276 aa12.5□□□□□ -0.41
MBD1-204ENST00000347968 INS-IGF2F8WCM5 200 aa12.49□□□□□ -0.41
MBD1-204ENST00000347968 CEMP1Q6PRD7 247 aaPredicted RBP12.49□□□□□ -0.41
MBD1-204ENST00000347968 PRO1854Q9UHT4 67 aa12.49□□□□□ -0.41
MBD1-204ENST00000347968 A0A0J9YY99 117 aa12.49□□□□□ -0.41
MBD1-204ENST00000347968 TSPEAR-AS2P59090 65 aa12.49□□□□□ -0.41
MBD1-204ENST00000347968 DEFB109BQ30KR1 87 aa12.49□□□□□ -0.41
MBD1-204ENST00000347968 ZNF491Q8N8L2 437 aa12.49□□□□□ -0.41
MBD1-204ENST00000347968 PRAC2D3DTV9 90 aa12.48□□□□□ -0.41
MBD1-204ENST00000347968 EIF4EBP3O60516 100 aaPredicted RBP12.48□□□□□ -0.41
MBD1-204ENST00000347968 PF4V1P10720 104 aa12.48□□□□□ -0.41
MBD1-204ENST00000347968 IGHV3-64A0A075B6Q5 118 aa12.48□□□□□ -0.41
MBD1-204ENST00000347968 TRGV5A0A0B4J1U4 118 aa12.48□□□□□ -0.41
MBD1-204ENST00000347968 LINC01546A6NGU7 62 aa12.48□□□□□ -0.41
MBD1-204ENST00000347968 K7EM74 188 aa12.48□□□□□ -0.41
MBD1-204ENST00000347968 LHBP01229 141 aa12.48□□□□□ -0.41
MBD1-204ENST00000347968 CCL8P80075 99 aa12.48□□□□□ -0.41
MBD1-204ENST00000347968 IL17RELQ6ZVW7 336 aa12.48□□□□□ -0.41
MBD1-204ENST00000347968 M0R1B8 84 aa12.48□□□□□ -0.41
MBD1-204ENST00000347968 CD40P25942 277 aa12.48□□□□□ -0.41
MBD1-204ENST00000347968 C11orf21Q9P2W6 132 aa12.48□□□□□ -0.41
MBD1-204ENST00000347968 CEP295Q9C0D2 2601 aa12.47□□□□□ -0.41
MBD1-204ENST00000347968 A4D1N5 150 aa12.47□□□□□ -0.41
MBD1-204ENST00000347968 RNF182Q8N6D2 247 aa12.47□□□□□ -0.41
MBD1-204ENST00000347968 BAALCQ8WXS3 180 aa12.47□□□□□ -0.41
MBD1-204ENST00000347968 RPL39LQ96EH5 51 aaKnown RBP12.47□□□□□ -0.41
MBD1-204ENST00000347968 RNF7Q9UBF6 113 aa12.47□□□□□ -0.41
MBD1-204ENST00000347968 PLGLAQ15195 96 aa12.47□□□□□ -0.41
MBD1-204ENST00000347968 Q6ZT83 130 aa12.47□□□□□ -0.41
MBD1-204ENST00000347968 PIEZO2Q9H5I5 2752 aa12.46□□□□□ -0.41
MBD1-204ENST00000347968 TM4SF5O14894 197 aa12.46□□□□□ -0.41
MBD1-204ENST00000347968 COX6B1P14854 86 aa12.46□□□□□ -0.41
MBD1-204ENST00000347968 IGHV3OR16-13A0A075B7E8 117 aa12.46□□□□□ -0.41
MBD1-204ENST00000347968 IGHV3-74A0A0B4J1X5 117 aa12.46□□□□□ -0.41
MBD1-204ENST00000347968 FAM236AA0A1B0GUQ0 79 aa12.46□□□□□ -0.41
MBD1-204ENST00000347968 FAM236BA0A1B0GV22 79 aa12.46□□□□□ -0.41
MBD1-204ENST00000347968 C11orf86A6NJI1 115 aa12.46□□□□□ -0.41
MBD1-204ENST00000347968 NEXN-AS1Q8NBZ9 246 aa12.46□□□□□ -0.41
MBD1-204ENST00000347968 MDFICQ9P1T7 246 aa12.46□□□□□ -0.41
MBD1-204ENST00000347968 I3L2K1 104 aa12.46□□□□□ -0.42
MBD1-204ENST00000347968 IGHV3-30P01768 117 aa12.46□□□□□ -0.42
MBD1-204ENST00000347968 IGHV3-30-5P0DP03 117 aa12.46□□□□□ -0.42
MBD1-204ENST00000347968 TMEM200BQ69YZ2 307 aa12.46□□□□□ -0.42
MBD1-204ENST00000347968 DYNAPQ8N1N2 210 aa12.46□□□□□ -0.42
MBD1-204ENST00000347968 LINC01619G3V211 115 aa12.45□□□□□ -0.42
MBD1-204ENST00000347968 TNFAIP6P98066 277 aaPredicted RBP12.45□□□□□ -0.42
MBD1-204ENST00000347968 UBTD1Q9HAC8 227 aa12.45□□□□□ -0.42
MBD1-204ENST00000347968 MED13LQ71F56 2210 aa12.45□□□□□ -0.42
MBD1-204ENST00000347968 IGKV3D-20A0A0C4DH25 116 aa12.45□□□□□ -0.42
MBD1-204ENST00000347968 IGHV3-66A0A0C4DH42 116 aa12.45□□□□□ -0.42
MBD1-204ENST00000347968 ZNF22P17026 224 aaPredicted RBP12.45□□□□□ -0.42
MBD1-204ENST00000347968 BSNQ9UPA5 3926 aa12.45□□□□□ -0.42
MBD1-204ENST00000347968 TEX22C9J3V5 150 aa12.44□□□□□ -0.42
MBD1-204ENST00000347968 TIMM23O14925 209 aa12.44□□□□□ -0.42
MBD1-204ENST00000347968 LINC01620Q4KN68 170 aa12.44□□□□□ -0.42
MBD1-204ENST00000347968 TMEM170BQ5T4T1 132 aa12.44□□□□□ -0.42
MBD1-204ENST00000347968 SPANXN1Q5VSR9 72 aa12.44□□□□□ -0.42
MBD1-204ENST00000347968 NRGNQ92686 78 aa12.44□□□□□ -0.42
MBD1-204ENST00000347968 EDA2RQ9HAV5 297 aa12.44□□□□□ -0.42
MBD1-204ENST00000347968 ABCA4P78363 2273 aa12.44□□□□□ -0.42
MBD1-204ENST00000347968 C9orf153Q5TBE3 101 aa12.44□□□□□ -0.42
MBD1-204ENST00000347968 ZNF474Q6S9Z5 364 aaPredicted RBP12.44□□□□□ -0.42
MBD1-204ENST00000347968 TRGV11A0A075B6L2 103 aa12.43□□□□□ -0.42
MBD1-204ENST00000347968 HERVK_113P61574 105 aa12.43□□□□□ -0.42
MBD1-204ENST00000347968 MZT1Q08AG7 82 aa12.43□□□□□ -0.42
MBD1-204ENST00000347968 C2orf66Q6UXQ4 117 aa12.43□□□□□ -0.42
MBD1-204ENST00000347968 APC2O95996 2303 aa12.43□□□□□ -0.42
MBD1-204ENST00000347968 ANKRD11Q6UB99 2663 aaPredicted RBP12.43□□□□□ -0.42
MBD1-204ENST00000347968 CEACAM4O75871 244 aa12.43□□□□□ -0.42
MBD1-204ENST00000347968 H3BMM0 161 aa12.43□□□□□ -0.42
MBD1-204ENST00000347968 K7EIM0 57 aa12.43□□□□□ -0.42
MBD1-204ENST00000347968 DUSP14O95147 198 aaKnown RBP12.43□□□□□ -0.42
MBD1-204ENST00000347968 UBE2WQ96B02 151 aa12.43□□□□□ -0.42
MBD1-204ENST00000347968 SMIM2Q9BVW6 85 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms