RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 TRBV19A0A075B6N1 114 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 NDUFS6O75380 124 aaKnown RBP9.34□□□□□ -0.91
SHANK2-201ENST00000338508 IGHV7-4-1A0A0J9YVY3 117 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 C17orf77Q96MU5 243 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 GAGE12HA6NDE8 117 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 H0Y9J4 135 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 NDUFB1O75438 58 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 GP9P14770 177 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 ZC2HC1AQ96GY0 325 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 SEC61GP60059 68 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 NRGNQ92686 78 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 SIGLEC8Q9NYZ4 499 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 J3QQQ9 107 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 AMTNQ6UX39 209 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 IGKV3D-7A0A0C4DH55 119 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 IGLL5B9A064 214 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 PPDPFLQ8WWR9 84 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 PRR25Q96S07 402 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 NDUFA4L2Q9NRX3 87 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 TMEM14BQ9NUH8 114 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 C9orf118A6NHY6 69 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 B3GALT5-AS1P59052 145 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 PYY3Q5JQD4 70 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 C9orf66Q5T8R8 295 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 C18orf32Q8TCD1 76 aa9.33□□□□□ -0.92
SHANK2-201ENST00000338508 TRAV1-1A0A0B4J248 108 aa9.32□□□□□ -0.92
SHANK2-201ENST00000338508 HIST2H2BCQ6DN03 193 aa9.32□□□□□ -0.92
SHANK2-201ENST00000338508 DKK2Q9UBU2 259 aa9.32□□□□□ -0.92
SHANK2-201ENST00000338508 KLF2Q9Y5W3 355 aaPredicted RBP9.32□□□□□ -0.92
SHANK2-201ENST00000338508 MED13LQ71F56 2210 aa9.32□□□□□ -0.92
SHANK2-201ENST00000338508 POLR3KQ9Y2Y1 108 aaPredicted RBP9.32□□□□□ -0.92
SHANK2-201ENST00000338508 ICOSQ9Y6W8 199 aa9.32□□□□□ -0.92
SHANK2-201ENST00000338508 RIF1Q5UIP0 2472 aaKnown RBP9.32□□□□□ -0.92
SHANK2-201ENST00000338508 NPYP01303 97 aa9.32□□□□□ -0.92
SHANK2-201ENST00000338508 YPEL3P61236 119 aaPredicted RBP9.31□□□□□ -0.92
SHANK2-201ENST00000338508 RNF138Q8WVD3 245 aa9.31□□□□□ -0.92
SHANK2-201ENST00000338508 C17orf58Q2M2W7 97 aa9.31□□□□□ -0.92
SHANK2-201ENST00000338508 DYNAPQ8N1N2 210 aa9.31□□□□□ -0.92
SHANK2-201ENST00000338508 GTSF1Q8WW33 167 aa9.31□□□□□ -0.92
SHANK2-201ENST00000338508 VOPP1Q96AW1 172 aa9.31□□□□□ -0.92
SHANK2-201ENST00000338508 J3QLI3 93 aa9.31□□□□□ -0.92
SHANK2-201ENST00000338508 IGLC2P0DOY2 106 aa9.31□□□□□ -0.92
SHANK2-201ENST00000338508 IGLC3P0DOY3 106 aa9.31□□□□□ -0.92
SHANK2-201ENST00000338508 ZNF833PQ6ZTB9 187 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 SLC25A29Q8N8R3 303 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 DAND5Q8N907 189 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 LY96Q9Y6Y9 160 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 ACYP1P07311 99 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 OR11H6Q8NGC7 330 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 WDR90Q96KV7 1748 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 MED12LQ86YW9 2145 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 VSIG2Q96IQ7 327 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 IGKV4-1P06312 121 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 HOXB4P17483 251 aaPredicted RBP9.3□□□□□ -0.92
SHANK2-201ENST00000338508 H3BRN7 92 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 COX7A2LO14548 114 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 SPART-AS1P0CW21 52 aa9.3□□□□□ -0.92
SHANK2-201ENST00000338508 NTN5Q8WTR8 489 aaPredicted RBP9.3□□□□□ -0.92
SHANK2-201ENST00000338508 COL4A6Q14031 1691 aa9.29□□□□□ -0.92
SHANK2-201ENST00000338508 GRNP28799 593 aaKnown RBP9.29□□□□□ -0.92
SHANK2-201ENST00000338508 IGLV3-9A0A075B6K5 115 aa9.29□□□□□ -0.92
SHANK2-201ENST00000338508 A0A1B0GX51 115 aa9.29□□□□□ -0.92
SHANK2-201ENST00000338508 A0A096LNI7 61 aa9.29□□□□□ -0.92
SHANK2-201ENST00000338508 MRPL36Q9P0J6 103 aaKnown RBP9.29□□□□□ -0.92
SHANK2-201ENST00000338508 VPREB3Q9UKI3 123 aa9.29□□□□□ -0.92
SHANK2-201ENST00000338508 ETV2O00321 342 aaPredicted RBP9.29□□□□□ -0.92
SHANK2-201ENST00000338508 RPL39LQ96EH5 51 aaKnown RBP9.29□□□□□ -0.92
SHANK2-201ENST00000338508 A0A1B0GW64 132 aa9.28□□□□□ -0.92
SHANK2-201ENST00000338508 F8VRH5 84 aa9.28□□□□□ -0.92
SHANK2-201ENST00000338508 PROP1O75360 226 aa9.28□□□□□ -0.92
SHANK2-201ENST00000338508 ATP6V0E2Q8NHE4 81 aa9.28□□□□□ -0.92
SHANK2-201ENST00000338508 NREPQ16612 68 aa9.28□□□□□ -0.92
SHANK2-201ENST00000338508 FOXI2Q6ZQN5 318 aa9.28□□□□□ -0.92
SHANK2-201ENST00000338508 F8W1H4 67 aa9.28□□□□□ -0.92
SHANK2-201ENST00000338508 DEFB135Q30KP9 77 aa9.28□□□□□ -0.92
SHANK2-201ENST00000338508 IGHV4-38-2P0DP08 117 aa9.27□□□□□ -0.92
SHANK2-201ENST00000338508 GATA1P15976 413 aaPredicted RBP9.27□□□□□ -0.92
SHANK2-201ENST00000338508 MP68P56378 58 aa9.27□□□□□ -0.92
SHANK2-201ENST00000338508 BVES-AS1Q5T3Y7 98 aa9.27□□□□□ -0.92
SHANK2-201ENST00000338508 FNDC1Q4ZHG4 1894 aaPredicted RBP9.27□□□□□ -0.92
SHANK2-201ENST00000338508 IGKV2-24A0A0C4DH68 120 aa9.27□□□□□ -0.93
SHANK2-201ENST00000338508 ELANEP08246 267 aa9.27□□□□□ -0.93
SHANK2-201ENST00000338508 MRPL23Q16540 153 aaKnown RBP9.27□□□□□ -0.93
SHANK2-201ENST00000338508 LOXP28300 417 aaPredicted RBP9.27□□□□□ -0.93
SHANK2-201ENST00000338508 GPHB5Q86YW7 130 aa9.27□□□□□ -0.93
SHANK2-201ENST00000338508 ZNF492Q9P255 531 aa9.27□□□□□ -0.93
SHANK2-201ENST00000338508 IGKV1-6A0A0C4DH72 117 aa9.27□□□□□ -0.93
SHANK2-201ENST00000338508 A0A1W2PPM0 123 aa9.27□□□□□ -0.93
SHANK2-201ENST00000338508 ZFP36P26651 326 aaKnown RBP9.27□□□□□ -0.93
SHANK2-201ENST00000338508 Q6ZR03 302 aa9.27□□□□□ -0.93
SHANK2-201ENST00000338508 A0A0G2JMZ2 1700 aa9.27□□□□□ -0.93
SHANK2-201ENST00000338508 LRRC37A2A6NM11 1700 aa9.27□□□□□ -0.93
SHANK2-201ENST00000338508 FNDC10F2Z333 226 aa9.27□□□□□ -0.93
SHANK2-201ENST00000338508 WT1-ASQ06250 92 aa9.27□□□□□ -0.93
SHANK2-201ENST00000338508 TMEM190Q8WZ59 177 aa9.27□□□□□ -0.93
SHANK2-201ENST00000338508 TRBV6-6A0A0A6YYG2 114 aa9.26□□□□□ -0.93
SHANK2-201ENST00000338508 CACNA1HO95180 2353 aa9.26□□□□□ -0.93
SHANK2-201ENST00000338508 CSRP3P50461 194 aa9.26□□□□□ -0.93
SHANK2-201ENST00000338508 SS18L2Q9UHA2 77 aa9.26□□□□□ -0.93
SHANK2-201ENST00000338508 DEFB113Q30KQ7 82 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms