RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 FOXA3P55318 350 aaPredicted RBP10.85□□□□□ -0.67
CBX3-201ENST00000337620 COL6A5A8TX70 2615 aa10.85□□□□□ -0.67
CBX3-201ENST00000337620 A8MTW9 85 aa10.84□□□□□ -0.67
CBX3-201ENST00000337620 SSTP61278 116 aa10.84□□□□□ -0.67
CBX3-201ENST00000337620 ZFP82Q8N141 532 aa10.84□□□□□ -0.67
CBX3-201ENST00000337620 WFDC10AQ9H1F0 79 aa10.84□□□□□ -0.67
CBX3-201ENST00000337620 RAB4BP61018 213 aa10.84□□□□□ -0.67
CBX3-201ENST00000337620 ANXA2RQ3ZCQ2 193 aa10.84□□□□□ -0.67
CBX3-201ENST00000337620 LYZL1Q6UWQ5 148 aa10.84□□□□□ -0.67
CBX3-201ENST00000337620 MUC21A0A0G2JKD1 596 aa10.83□□□□□ -0.68
CBX3-201ENST00000337620 MUC21A0A140T8X8 626 aa10.83□□□□□ -0.68
CBX3-201ENST00000337620 CAMPP49913 170 aa10.83□□□□□ -0.68
CBX3-201ENST00000337620 LURAP1LQ8IV03 231 aa10.83□□□□□ -0.68
CBX3-201ENST00000337620 FER1L6-AS1Q8NA97 138 aa10.83□□□□□ -0.68
CBX3-201ENST00000337620 FRZBQ92765 325 aa10.83□□□□□ -0.68
CBX3-201ENST00000337620 FAM110AQ9BQ89 295 aa10.83□□□□□ -0.68
CBX3-201ENST00000337620 C19orf73Q9NVV2 129 aa10.83□□□□□ -0.68
CBX3-201ENST00000337620 TRAPPC1Q9Y5R8 145 aa10.83□□□□□ -0.68
CBX3-201ENST00000337620 SNURFLB1AK76 121 aa10.82□□□□□ -0.68
CBX3-201ENST00000337620 ZNF324O75467 553 aaPredicted RBP10.82□□□□□ -0.68
CBX3-201ENST00000337620 ARMS2P0C7Q2 107 aa10.82□□□□□ -0.68
CBX3-201ENST00000337620 FABP9Q0Z7S8 132 aa10.82□□□□□ -0.68
CBX3-201ENST00000337620 FAM159AQ6UWV7 190 aa10.82□□□□□ -0.68
CBX3-201ENST00000337620 BORCS7Q96B45 105 aa10.82□□□□□ -0.68
CBX3-201ENST00000337620 A0A1B0GUT8 65 aa10.82□□□□□ -0.68
CBX3-201ENST00000337620 RAB5BP61020 215 aa10.82□□□□□ -0.68
CBX3-201ENST00000337620 ATP5L2Q7Z4Y8 100 aa10.82□□□□□ -0.68
CBX3-201ENST00000337620 GTSCR1Q86UQ5 136 aa10.82□□□□□ -0.68
CBX3-201ENST00000337620 IGLC6P0CF74 106 aa10.81□□□□□ -0.68
CBX3-201ENST00000337620 HBBP68871 147 aa10.81□□□□□ -0.68
CBX3-201ENST00000337620 TRPT1Q86TN4 253 aaKnown RBP10.81□□□□□ -0.68
CBX3-201ENST00000337620 GNB1LQ9BYB4 327 aa10.81□□□□□ -0.68
CBX3-201ENST00000337620 CRXO43186 299 aaPredicted RBP10.81□□□□□ -0.68
CBX3-201ENST00000337620 GNRH2O43555 120 aa10.81□□□□□ -0.68
CBX3-201ENST00000337620 WDR73Q6P4I2 378 aa10.81□□□□□ -0.68
CBX3-201ENST00000337620 TIMM8BQ9Y5J9 83 aaPredicted RBP10.81□□□□□ -0.68
CBX3-201ENST00000337620 A0A1B0GXF2 115 aa10.8□□□□□ -0.68
CBX3-201ENST00000337620 S100A4P26447 101 aaKnown RBP10.8□□□□□ -0.68
CBX3-201ENST00000337620 RIGQ13278 110 aa10.8□□□□□ -0.68
CBX3-201ENST00000337620 COX19Q49B96 90 aa10.8□□□□□ -0.68
CBX3-201ENST00000337620 RASL11AQ6T310 242 aa10.8□□□□□ -0.68
CBX3-201ENST00000337620 TMEM136Q6ZRR5 245 aa10.8□□□□□ -0.68
CBX3-201ENST00000337620 DEFB125Q8N687 156 aa10.8□□□□□ -0.68
CBX3-201ENST00000337620 CLUHP3Q96NS8 147 aa10.8□□□□□ -0.68
CBX3-201ENST00000337620 MRPL18Q9H0U6 180 aaKnown RBP10.8□□□□□ -0.68
CBX3-201ENST00000337620 KCNS1Q96KK3 526 aa10.79□□□□□ -0.68
CBX3-201ENST00000337620 F2Z2F3 143 aa10.79□□□□□ -0.68
CBX3-201ENST00000337620 H3BVH4 76 aa10.79□□□□□ -0.68
CBX3-201ENST00000337620 RPL35AP18077 110 aaKnown RBP10.79□□□□□ -0.68
CBX3-201ENST00000337620 CTRLP40313 264 aa10.79□□□□□ -0.68
CBX3-201ENST00000337620 ASIPP42127 132 aa10.79□□□□□ -0.68
CBX3-201ENST00000337620 NUTF2P61970 127 aaKnown RBP10.79□□□□□ -0.68
CBX3-201ENST00000337620 PRR31Q5SQ13 230 aa10.79□□□□□ -0.68
CBX3-201ENST00000337620 SSBP4Q9BWG4 385 aaPredicted RBP10.79□□□□□ -0.68
CBX3-201ENST00000337620 XCL2Q9UBD3 114 aa10.79□□□□□ -0.68
CBX3-201ENST00000337620 PHOX2AO14813 284 aa10.78□□□□□ -0.68
CBX3-201ENST00000337620 RBMY1A1P0DJD3 496 aaKnown RBP10.78□□□□□ -0.68
CBX3-201ENST00000337620 RBMY1CP0DJD4 496 aa10.78□□□□□ -0.68
CBX3-201ENST00000337620 RBMY1FQ15415 496 aaKnown RBP10.78□□□□□ -0.68
CBX3-201ENST00000337620 IGHV1OR15-1A0A075B7D0 117 aa10.78□□□□□ -0.68
CBX3-201ENST00000337620 HLA-DQA1P01909 254 aa10.78□□□□□ -0.68
CBX3-201ENST00000337620 MT-ND6P03923 174 aa10.78□□□□□ -0.68
CBX3-201ENST00000337620 TRGC1P0CF51 173 aa10.78□□□□□ -0.68
CBX3-201ENST00000337620 HTN1P15515 57 aa10.78□□□□□ -0.68
CBX3-201ENST00000337620 NTF3P20783 257 aa10.78□□□□□ -0.68
CBX3-201ENST00000337620 TWIST1Q15672 202 aa10.78□□□□□ -0.68
CBX3-201ENST00000337620 TP53TG3Q9ULZ0 132 aa10.78□□□□□ -0.68
CBX3-201ENST00000337620 CMYA5Q8N3K9 4069 aa10.77□□□□□ -0.68
CBX3-201ENST00000337620 INSP01308 110 aa10.77□□□□□ -0.69
CBX3-201ENST00000337620 SPRY2O43597 315 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 APCSP02743 223 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 AMBPP02760 352 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 TDRG1Q3Y452 100 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 OXLD1Q5BKU9 147 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 OR10AG1Q8NH19 301 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 A0A1B0GW15 77 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 WIPF1O43516 503 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 HIST1H2BKO60814 126 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 S100A8P05109 93 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 HIST1H2BJP06899 126 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 OR5AL1P0C617 328 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 HIST1H2BOP23527 126 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 HIST1H2BBP33778 126 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 HIST1H2BDP58876 126 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 HIST1H2BCP62807 126 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 SLAQ13239 276 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 HIST2H2BEQ16778 126 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 KIAA1644Q3SXP7 199 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.76□□□□□ -0.69
CBX3-201ENST00000337620 Q8N1Y9 231 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 HIST1H2BHQ93079 126 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 HIST1H2BNQ99877 126 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 HIST1H2BMQ99879 126 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 MSRB1Q9NZV6 116 aa10.76□□□□□ -0.69
CBX3-201ENST00000337620 CBY3A6NI87 242 aa10.75□□□□□ -0.69
CBX3-201ENST00000337620 SNAI2O43623 268 aa10.75□□□□□ -0.69
CBX3-201ENST00000337620 SPANXN1Q5VSR9 72 aa10.75□□□□□ -0.69
CBX3-201ENST00000337620 LINC01587Q99440 93 aa10.75□□□□□ -0.69
CBX3-201ENST00000337620 PKD1L1Q8TDX9 2849 aa10.75□□□□□ -0.69
CBX3-201ENST00000337620 RNASE3P12724 160 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms