RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 S100A1P23297 94 aa15.61■□□□□ 0.09
TPM1-204ENST00000334895 RHEBQ15382 184 aa15.61■□□□□ 0.09
TPM1-204ENST00000334895 ZNF705AQ6ZN79 300 aaPredicted RBP15.61■□□□□ 0.09
TPM1-204ENST00000334895 NBEAL2Q6ZNJ1 2754 aa15.61■□□□□ 0.09
TPM1-204ENST00000334895 C15orf54Q8N8G6 183 aa15.61■□□□□ 0.09
TPM1-204ENST00000334895 OR2D3Q8NGH3 330 aa15.61■□□□□ 0.09
TPM1-204ENST00000334895 IGHV1OR15-1A0A075B7D0 117 aa15.6■□□□□ 0.09
TPM1-204ENST00000334895 H7BYZ3 331 aa15.6■□□□□ 0.09
TPM1-204ENST00000334895 UBE2CO00762 179 aa15.6■□□□□ 0.09
TPM1-204ENST00000334895 DEFB135Q30KP9 77 aa15.6■□□□□ 0.09
TPM1-204ENST00000334895 TDRG1Q3Y452 100 aa15.6■□□□□ 0.09
TPM1-204ENST00000334895 LINC01587Q99440 93 aa15.6■□□□□ 0.09
TPM1-204ENST00000334895 IGHV3OR16-12A0A075B7B8 117 aa15.59■□□□□ 0.09
TPM1-204ENST00000334895 TMEM189A5PLL7 270 aa15.59■□□□□ 0.09
TPM1-204ENST00000334895 MT-ND4LP03901 98 aa15.59■□□□□ 0.09
TPM1-204ENST00000334895 TMEM256Q8N2U0 113 aa15.59■□□□□ 0.09
TPM1-204ENST00000334895 TP53TG3Q9ULZ0 132 aa15.59■□□□□ 0.09
TPM1-204ENST00000334895 GOLT1BQ9Y3E0 138 aa15.59■□□□□ 0.09
TPM1-204ENST00000334895 GZMBP10144 247 aa15.58■□□□□ 0.09
TPM1-204ENST00000334895 DEFB121Q5J5C9 76 aa15.58■□□□□ 0.09
TPM1-204ENST00000334895 FAM159AQ6UWV7 190 aa15.58■□□□□ 0.09
TPM1-204ENST00000334895 PYGO2Q9BRQ0 406 aa15.58■□□□□ 0.09
TPM1-204ENST00000334895 LINC00467Q9BRT7 94 aa15.58■□□□□ 0.09
TPM1-204ENST00000334895 RPS10P5Q9NQ39 176 aa15.58■□□□□ 0.09
TPM1-204ENST00000334895 GNRH2O43555 120 aa15.57■□□□□ 0.08
TPM1-204ENST00000334895 TYMSP04818 313 aa15.57■□□□□ 0.08
TPM1-204ENST00000334895 ANAPC16Q96DE5 110 aa15.57■□□□□ 0.08
TPM1-204ENST00000334895 TMEM208Q9BTX3 173 aa15.57■□□□□ 0.08
TPM1-204ENST00000334895 GRIFINA4D1Z8 144 aa15.57■□□□□ 0.08
TPM1-204ENST00000334895 CT83Q5H943 113 aa15.57■□□□□ 0.08
TPM1-204ENST00000334895 Q6ZWC4 215 aa15.57■□□□□ 0.08
TPM1-204ENST00000334895 A0A087WWC5 75 aa15.56■□□□□ 0.08
TPM1-204ENST00000334895 PPP1R2P9O14990 202 aa15.56■□□□□ 0.08
TPM1-204ENST00000334895 HTN1P15515 57 aa15.56■□□□□ 0.08
TPM1-204ENST00000334895 SBSPONQ8IVN8 264 aa15.55■□□□□ 0.08
TPM1-204ENST00000334895 GTSF1Q8WW33 167 aa15.55■□□□□ 0.08
TPM1-204ENST00000334895 RNF183Q96D59 192 aa15.55■□□□□ 0.08
TPM1-204ENST00000334895 KCNS1Q96KK3 526 aa15.55■□□□□ 0.08
TPM1-204ENST00000334895 RCHY1Q96PM5 261 aa15.55■□□□□ 0.08
TPM1-204ENST00000334895 CTDSP1Q9GZU7 261 aa15.55■□□□□ 0.08
TPM1-204ENST00000334895 X6R8D5 127 aa15.55■□□□□ 0.08
TPM1-204ENST00000334895 AZU1P20160 251 aa15.54■□□□□ 0.08
TPM1-204ENST00000334895 TSKUQ8WUA8 353 aa15.54■□□□□ 0.08
TPM1-204ENST00000334895 CBY3A6NI87 242 aa15.54■□□□□ 0.08
TPM1-204ENST00000334895 RETNQ9HD89 108 aa15.54■□□□□ 0.08
TPM1-204ENST00000334895 MDFICQ9P1T7 246 aa15.54■□□□□ 0.08
TPM1-204ENST00000334895 IGHV3-16A0A0C4DH30 117 aa15.53■□□□□ 0.08
TPM1-204ENST00000334895 A8MWL6 223 aa15.53■□□□□ 0.08
TPM1-204ENST00000334895 CXCL1P09341 107 aa15.53■□□□□ 0.08
TPM1-204ENST00000334895 RPS20P60866 119 aaKnown RBP15.53■□□□□ 0.08
TPM1-204ENST00000334895 NEU1Q99519 415 aa15.53■□□□□ 0.08
TPM1-204ENST00000334895 TMEM242Q9NWH2 141 aa15.53■□□□□ 0.08
TPM1-204ENST00000334895 IGLC6P0CF74 106 aa15.52■□□□□ 0.08
TPM1-204ENST00000334895 RNASE3P12724 160 aaKnown RBP15.52■□□□□ 0.08
TPM1-204ENST00000334895 TCL1AP56279 114 aa15.52■□□□□ 0.08
TPM1-204ENST00000334895 DNLZQ5SXM8 178 aa15.52■□□□□ 0.08
TPM1-204ENST00000334895 C11orf72Q8NBR9 251 aa15.52■□□□□ 0.08
TPM1-204ENST00000334895 OVOL2Q9BRP0 275 aa15.52■□□□□ 0.08
TPM1-204ENST00000334895 IL36BQ9NZH7 164 aa15.52■□□□□ 0.08
TPM1-204ENST00000334895 SMIM27A0A1W2PRY6 76 aa15.51■□□□□ 0.07
TPM1-204ENST00000334895 SPRY2O43597 315 aa15.51■□□□□ 0.07
TPM1-204ENST00000334895 DNAH9Q9NYC9 4486 aa15.51■□□□□ 0.07
TPM1-204ENST00000334895 TRGV11A0A075B6L2 103 aa15.5■□□□□ 0.07
TPM1-204ENST00000334895 XKRY2A2RUG3 117 aa15.5■□□□□ 0.07
TPM1-204ENST00000334895 ASIPP42127 132 aa15.5■□□□□ 0.07
TPM1-204ENST00000334895 OR11H2Q8NH07 326 aa15.5■□□□□ 0.07
TPM1-204ENST00000334895 RNASE8Q8TDE3 154 aaKnown RBP15.5■□□□□ 0.07
TPM1-204ENST00000334895 H3BVH4 76 aa15.5■□□□□ 0.07
TPM1-204ENST00000334895 SCO1O75880 301 aa15.5■□□□□ 0.07
TPM1-204ENST00000334895 GFRA4Q9GZZ7 299 aa15.5■□□□□ 0.07
TPM1-204ENST00000334895 TP53TG1Q9Y2A0 90 aa15.5■□□□□ 0.07
TPM1-204ENST00000334895 PLAC8L1A1L4L8 177 aa15.49■□□□□ 0.07
TPM1-204ENST00000334895 HIGD1CA8MV81 97 aa15.49■□□□□ 0.07
TPM1-204ENST00000334895 FOXA3P55318 350 aaPredicted RBP15.49■□□□□ 0.07
TPM1-204ENST00000334895 RRN3P1Q2M238 152 aa15.49■□□□□ 0.07
TPM1-204ENST00000334895 TMEM263Q8WUH6 116 aaKnown RBP15.49■□□□□ 0.07
TPM1-204ENST00000334895 SSBP4Q9BWG4 385 aaPredicted RBP15.49■□□□□ 0.07
TPM1-204ENST00000334895 TENM3Q9P273 2699 aa15.49■□□□□ 0.07
TPM1-204ENST00000334895 HUWE1Q7Z6Z7 4374 aaKnown RBP15.48■□□□□ 0.07
TPM1-204ENST00000334895 FAM231BA6NCW3 169 aa15.48■□□□□ 0.07
TPM1-204ENST00000334895 ARMS2P0C7Q2 107 aa15.48■□□□□ 0.07
TPM1-204ENST00000334895 FAM3BP58499 235 aaPredicted RBP15.48■□□□□ 0.07
TPM1-204ENST00000334895 FER1L6-AS1Q8NA97 138 aa15.48■□□□□ 0.07
TPM1-204ENST00000334895 C9orf85Q96MD7 179 aa15.48■□□□□ 0.07
TPM1-204ENST00000334895 SCRT2Q9NQ03 307 aa15.48■□□□□ 0.07
TPM1-204ENST00000334895 GSN-AS1Q9NRJ2 163 aa15.48■□□□□ 0.07
TPM1-204ENST00000334895 MUC4Q99102 2169 aa15.48■□□□□ 0.07
TPM1-204ENST00000334895 SNAI2O43623 268 aa15.47■□□□□ 0.07
TPM1-204ENST00000334895 S100A4P26447 101 aaKnown RBP15.47■□□□□ 0.07
TPM1-204ENST00000334895 TMEM88Q6PEY1 159 aa15.47■□□□□ 0.07
TPM1-204ENST00000334895 CBLN2Q8IUK8 224 aa15.47■□□□□ 0.07
TPM1-204ENST00000334895 NUP35Q8NFH5 326 aa15.47■□□□□ 0.07
TPM1-204ENST00000334895 IL17DQ8TAD2 202 aa15.47■□□□□ 0.07
TPM1-204ENST00000334895 TM2D3Q9BRN9 247 aa15.47■□□□□ 0.07
TPM1-204ENST00000334895 TPPP3Q9BW30 176 aa15.47■□□□□ 0.07
TPM1-204ENST00000334895 TIMM8BQ9Y5J9 83 aaPredicted RBP15.47■□□□□ 0.07
TPM1-204ENST00000334895 SMIM9A6NGZ8 99 aa15.46■□□□□ 0.07
TPM1-204ENST00000334895 CTRLP40313 264 aa15.46■□□□□ 0.07
TPM1-204ENST00000334895 LYZL1Q6UWQ5 148 aa15.46■□□□□ 0.07
TPM1-204ENST00000334895 PGLYRP4Q96LB8 373 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms