RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.04□□□□□ -0.64
PABPC1-201ENST00000318607 PLA2G2CQ5R387 149 aa11.04□□□□□ -0.64
PABPC1-201ENST00000318607 ZFP2Q6ZN57 461 aa11.04□□□□□ -0.64
PABPC1-201ENST00000318607 RAX2Q96IS3 184 aa11.04□□□□□ -0.64
PABPC1-201ENST00000318607 MYO18BQ8IUG5 2567 aa11.04□□□□□ -0.64
PABPC1-201ENST00000318607 PRTN3P24158 256 aa11.04□□□□□ -0.64
PABPC1-201ENST00000318607 C15orf32Q32M92 178 aa11.04□□□□□ -0.64
PABPC1-201ENST00000318607 RPL39LQ96EH5 51 aaKnown RBP11.04□□□□□ -0.64
PABPC1-201ENST00000318607 ZNF815PA8K554 130 aa11.03□□□□□ -0.64
PABPC1-201ENST00000318607 THBDP07204 575 aa11.03□□□□□ -0.64
PABPC1-201ENST00000318607 CCDC144NLQ6NUI1 221 aa11.03□□□□□ -0.64
PABPC1-201ENST00000318607 RAXQ9Y2V3 346 aa11.03□□□□□ -0.64
PABPC1-201ENST00000318607 TMEM219Q86XT9 240 aa11.03□□□□□ -0.64
PABPC1-201ENST00000318607 UBTD1Q9HAC8 227 aa11.03□□□□□ -0.64
PABPC1-201ENST00000318607 F6UB75 175 aa11.03□□□□□ -0.64
PABPC1-201ENST00000318607 IGHV3-11P01762 117 aa11.03□□□□□ -0.64
PABPC1-201ENST00000318607 Q1RN00 199 aa11.03□□□□□ -0.64
PABPC1-201ENST00000318607 TMEM78Q5T7P6 136 aa11.03□□□□□ -0.64
PABPC1-201ENST00000318607 ATP6V0BQ99437 205 aa11.03□□□□□ -0.64
PABPC1-201ENST00000318607 HHLA3Q9XRX5 114 aa11.03□□□□□ -0.64
PABPC1-201ENST00000318607 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.65
PABPC1-201ENST00000318607 SLC25A16P16260 332 aa11.02□□□□□ -0.65
PABPC1-201ENST00000318607 Q6AWC8 147 aa11.02□□□□□ -0.65
PABPC1-201ENST00000318607 DPM3Q9P2X0 92 aa11.02□□□□□ -0.65
PABPC1-201ENST00000318607 SPINK8P0C7L1 97 aa11.01□□□□□ -0.65
PABPC1-201ENST00000318607 NPC2P61916 151 aa11.01□□□□□ -0.65
PABPC1-201ENST00000318607 C11orf21Q9P2W6 132 aa11.01□□□□□ -0.65
PABPC1-201ENST00000318607 PIEZO1Q92508 2521 aa11.01□□□□□ -0.65
PABPC1-201ENST00000318607 M0QXV9 152 aa11.01□□□□□ -0.65
PABPC1-201ENST00000318607 C16orf92Q96LL3 132 aa11.01□□□□□ -0.65
PABPC1-201ENST00000318607 LINC00477Q96M19 166 aa11.01□□□□□ -0.65
PABPC1-201ENST00000318607 HOXA3O43365 443 aaPredicted RBP11□□□□□ -0.65
PABPC1-201ENST00000318607 FOXI2Q6ZQN5 318 aa11□□□□□ -0.65
PABPC1-201ENST00000318607 RNF185Q96GF1 192 aa11□□□□□ -0.65
PABPC1-201ENST00000318607 DLX6P56179 175 aa11□□□□□ -0.65
PABPC1-201ENST00000318607 LAGE3Q14657 143 aa11□□□□□ -0.65
PABPC1-201ENST00000318607 SPANXB1Q9NS25 103 aaPredicted RBP11□□□□□ -0.65
PABPC1-201ENST00000318607 FN1P02751 2386 aaKnown RBP11□□□□□ -0.65
PABPC1-201ENST00000318607 CD3EP07766 207 aa11□□□□□ -0.65
PABPC1-201ENST00000318607 PVRIGQ6DKI7 326 aa11□□□□□ -0.65
PABPC1-201ENST00000318607 KIR2DL4Q99706 377 aa11□□□□□ -0.65
PABPC1-201ENST00000318607 AGPAT4-IT1Q9H0P7 198 aa11□□□□□ -0.65
PABPC1-201ENST00000318607 TMEM14CQ9P0S9 112 aa11□□□□□ -0.65
PABPC1-201ENST00000318607 RPS20P60866 119 aaKnown RBP10.99□□□□□ -0.65
PABPC1-201ENST00000318607 GEMIN7Q9H840 131 aaKnown RBP10.99□□□□□ -0.65
PABPC1-201ENST00000318607 NXT2Q9NPJ8 142 aaKnown RBP10.99□□□□□ -0.65
PABPC1-201ENST00000318607 ZNF256Q9Y2P7 627 aaPredicted RBP10.99□□□□□ -0.65
PABPC1-201ENST00000318607 A0A087WWL8 130 aa10.99□□□□□ -0.65
PABPC1-201ENST00000318607 MT-ATP8P03928 68 aa10.99□□□□□ -0.65
PABPC1-201ENST00000318607 GATA3P23771 443 aa10.99□□□□□ -0.65
PABPC1-201ENST00000318607 FANCD2OSQ96PS1 177 aa10.99□□□□□ -0.65
PABPC1-201ENST00000318607 PHLDA3Q9Y5J5 127 aa10.99□□□□□ -0.65
PABPC1-201ENST00000318607 ABCA2Q9BZC7 2435 aa10.99□□□□□ -0.65
PABPC1-201ENST00000318607 IGKV3D-20A0A0C4DH25 116 aa10.99□□□□□ -0.65
PABPC1-201ENST00000318607 TRBV7-9A0A0J9YWB2 115 aa10.99□□□□□ -0.65
PABPC1-201ENST00000318607 ADARB2-AS1A8MUL3 147 aa10.99□□□□□ -0.65
PABPC1-201ENST00000318607 IGLV1-47P01700 117 aa10.99□□□□□ -0.65
PABPC1-201ENST00000318607 YAE1D1Q9NRH1 226 aa10.99□□□□□ -0.65
PABPC1-201ENST00000318607 NAV2Q8IVL1 2488 aa10.98□□□□□ -0.65
PABPC1-201ENST00000318607 RNASE4P34096 147 aaKnown RBP10.98□□□□□ -0.65
PABPC1-201ENST00000318607 C5orf64Q2M2E5 130 aa10.98□□□□□ -0.65
PABPC1-201ENST00000318607 ASCL5Q7RTU5 278 aa10.98□□□□□ -0.65
PABPC1-201ENST00000318607 C3orf56Q8N813 242 aa10.98□□□□□ -0.65
PABPC1-201ENST00000318607 PLEKHB2Q96CS7 222 aa10.98□□□□□ -0.65
PABPC1-201ENST00000318607 SMAD5-AS1Q9Y6J3 95 aa10.98□□□□□ -0.65
PABPC1-201ENST00000318607 CRYBG3Q68DQ2 2970 aa10.98□□□□□ -0.65
PABPC1-201ENST00000318607 PRADC1Q9BSG0 188 aa10.98□□□□□ -0.65
PABPC1-201ENST00000318607 PRSS2P07478 247 aa10.97□□□□□ -0.65
PABPC1-201ENST00000318607 ZNF672Q499Z4 452 aaPredicted RBP10.97□□□□□ -0.65
PABPC1-201ENST00000318607 OVOL3O00110 214 aa10.97□□□□□ -0.65
PABPC1-201ENST00000318607 CTSGP08311 255 aa10.97□□□□□ -0.65
PABPC1-201ENST00000318607 VCX2Q9H322 139 aa10.97□□□□□ -0.65
PABPC1-201ENST00000318607 ABCA12Q86UK0 2595 aa10.97□□□□□ -0.65
PABPC1-201ENST00000318607 FAM57AQ8TBR7 257 aa10.97□□□□□ -0.65
PABPC1-201ENST00000318607 LINC00574Q9H8X3 128 aa10.97□□□□□ -0.65
PABPC1-201ENST00000318607 JPT2Q9H910 190 aa10.97□□□□□ -0.65
PABPC1-201ENST00000318607 TRBV20-1A0A075B6N2 111 aa10.96□□□□□ -0.65
PABPC1-201ENST00000318607 DPF1Q92782 380 aa10.96□□□□□ -0.65
PABPC1-201ENST00000318607 ATP5LO75964 103 aa10.96□□□□□ -0.66
PABPC1-201ENST00000318607 ITPR1Q14643 2758 aa10.96□□□□□ -0.66
PABPC1-201ENST00000318607 GNRH2O43555 120 aa10.96□□□□□ -0.66
PABPC1-201ENST00000318607 IGHV4-39P01824 125 aa10.96□□□□□ -0.66
PABPC1-201ENST00000318607 ZNF493Q6ZR52 646 aa10.96□□□□□ -0.66
PABPC1-201ENST00000318607 LY6EQ16553 131 aa10.95□□□□□ -0.66
PABPC1-201ENST00000318607 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.95□□□□□ -0.66
PABPC1-201ENST00000318607 OPRPNQ99935 248 aaPredicted RBP10.95□□□□□ -0.66
PABPC1-201ENST00000318607 RPL39P62891 51 aaKnown RBP10.95□□□□□ -0.66
PABPC1-201ENST00000318607 SRSF1Q07955 248 aaKnown RBP eCLIP10.95□□□□□ -0.66
PABPC1-201ENST00000318607 SPXQ9BT56 116 aa10.95□□□□□ -0.66
PABPC1-201ENST00000318607 A0A0U1RRA0 63 aa10.94□□□□□ -0.66
PABPC1-201ENST00000318607 RRN3P1Q2M238 152 aa10.94□□□□□ -0.66
PABPC1-201ENST00000318607 RAB1BQ9H0U4 201 aa10.94□□□□□ -0.66
PABPC1-201ENST00000318607 ZFHX3Q15911 3703 aa10.94□□□□□ -0.66
PABPC1-201ENST00000318607 CSMD2Q7Z408 3487 aa10.94□□□□□ -0.66
PABPC1-201ENST00000318607 TMEM30BQ3MIR4 351 aa10.94□□□□□ -0.66
PABPC1-201ENST00000318607 LINC00311Q8N616 119 aa10.94□□□□□ -0.66
PABPC1-201ENST00000318607 CCL21O00585 134 aa10.94□□□□□ -0.66
PABPC1-201ENST00000318607 TRAV2A0A0B4J234 112 aa10.93□□□□□ -0.66
PABPC1-201ENST00000318607 E9PLD3 99 aa10.93□□□□□ -0.66
PABPC1-201ENST00000318607 CRYGBP07316 175 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 207.8 ms