RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 TRAV4A0A0B4J268 109 aa12.19□□□□□ -0.46
TPM1-203ENST00000317516 F6UZH7 168 aa12.19□□□□□ -0.46
TPM1-203ENST00000317516 CXorf1O96002 111 aa12.19□□□□□ -0.46
TPM1-203ENST00000317516 SFTA3P0C7M3 94 aa12.19□□□□□ -0.46
TPM1-203ENST00000317516 SRIP30626 198 aa12.19□□□□□ -0.46
TPM1-203ENST00000317516 OR4C5Q8NGB2 326 aa12.19□□□□□ -0.46
TPM1-203ENST00000317516 SUN5Q8TC36 379 aa12.19□□□□□ -0.46
TPM1-203ENST00000317516 TVP23CQ96ET8 276 aa12.19□□□□□ -0.46
TPM1-203ENST00000317516 PKHD1P08F94 4074 aa12.18□□□□□ -0.46
TPM1-203ENST00000317516 IGHV3-16A0A0C4DH30 117 aa12.18□□□□□ -0.46
TPM1-203ENST00000317516 TCRAP04437 139 aa12.18□□□□□ -0.46
TPM1-203ENST00000317516 SUMO1P63165 101 aaKnown RBP12.18□□□□□ -0.46
TPM1-203ENST00000317516 FBLL1A6NHQ2 334 aaKnown RBP12.17□□□□□ -0.46
TPM1-203ENST00000317516 C9JCJ5 164 aa12.17□□□□□ -0.46
TPM1-203ENST00000317516 K7EQD1 137 aa12.17□□□□□ -0.46
TPM1-203ENST00000317516 TAAR5O14804 337 aa12.17□□□□□ -0.46
TPM1-203ENST00000317516 ZFP69Q49AA0 526 aa12.17□□□□□ -0.46
TPM1-203ENST00000317516 Q5BKY6 102 aa12.17□□□□□ -0.46
TPM1-203ENST00000317516 SPATA12Q7Z6I5 190 aa12.17□□□□□ -0.46
TPM1-203ENST00000317516 SGK494Q96LW2 274 aa12.17□□□□□ -0.46
TPM1-203ENST00000317516 TXNDC17Q9BRA2 123 aa12.17□□□□□ -0.46
TPM1-203ENST00000317516 EPDR1Q9UM22 224 aa12.17□□□□□ -0.46
TPM1-203ENST00000317516 PSG8Q9UQ74 426 aa12.17□□□□□ -0.46
TPM1-203ENST00000317516 FXYD6-FXYD2A0A087WZ82 144 aa12.16□□□□□ -0.46
TPM1-203ENST00000317516 TYMSP04818 313 aa12.16□□□□□ -0.46
TPM1-203ENST00000317516 GYPEP15421 78 aa12.16□□□□□ -0.46
TPM1-203ENST00000317516 LINC00315P59091 139 aa12.16□□□□□ -0.46
TPM1-203ENST00000317516 SH2D6Q7Z4S9 175 aa12.16□□□□□ -0.46
TPM1-203ENST00000317516 SH3BGRL3Q9H299 93 aa12.16□□□□□ -0.46
TPM1-203ENST00000317516 PKD1P98161 4303 aa12.15□□□□□ -0.46
TPM1-203ENST00000317516 K7EP13 123 aa12.15□□□□□ -0.46
TPM1-203ENST00000317516 CIDEAO60543 219 aa12.15□□□□□ -0.46
TPM1-203ENST00000317516 SAPCD1Q5SSQ6 148 aa12.15□□□□□ -0.46
TPM1-203ENST00000317516 RPL7L1Q6DKI1 246 aaKnown RBP12.15□□□□□ -0.46
TPM1-203ENST00000317516 LY96Q9Y6Y9 160 aa12.15□□□□□ -0.46
TPM1-203ENST00000317516 A0A1W2PRE2 83 aa12.14□□□□□ -0.47
TPM1-203ENST00000317516 CDK2AP2O75956 126 aa12.14□□□□□ -0.47
TPM1-203ENST00000317516 PFN1P07737 140 aaKnown RBP12.14□□□□□ -0.47
TPM1-203ENST00000317516 FLI1Q01543 452 aaPredicted RBP12.14□□□□□ -0.47
TPM1-203ENST00000317516 SMUG1Q53HV7 270 aa12.14□□□□□ -0.47
TPM1-203ENST00000317516 NFE4Q86UQ8 179 aa12.14□□□□□ -0.47
TPM1-203ENST00000317516 CYB561D1Q8N8Q1 229 aa12.14□□□□□ -0.47
TPM1-203ENST00000317516 OR2T35Q8NGX2 323 aa12.14□□□□□ -0.47
TPM1-203ENST00000317516 DNAH11Q96DT5 4516 aa12.13□□□□□ -0.47
TPM1-203ENST00000317516 RNF222A6NCQ9 220 aa12.13□□□□□ -0.47
TPM1-203ENST00000317516 EREGO14944 169 aa12.13□□□□□ -0.47
TPM1-203ENST00000317516 GCGP01275 180 aa12.13□□□□□ -0.47
TPM1-203ENST00000317516 EVI2AP22794 236 aa12.13□□□□□ -0.47
TPM1-203ENST00000317516 ZNF876PQ49A33 203 aa12.13□□□□□ -0.47
TPM1-203ENST00000317516 PRNTQ86SH4 94 aa12.13□□□□□ -0.47
TPM1-203ENST00000317516 TMEM75Q8N9X5 138 aa12.13□□□□□ -0.47
TPM1-203ENST00000317516 GGTLC3B5MD39 225 aa12.12□□□□□ -0.47
TPM1-203ENST00000317516 NKX6-2Q9C056 277 aaPredicted RBP12.12□□□□□ -0.47
TPM1-203ENST00000317516 CTXND1A0A1B0GTU2 59 aa12.11□□□□□ -0.47
TPM1-203ENST00000317516 IFNA7P01567 189 aa12.11□□□□□ -0.47
TPM1-203ENST00000317516 IGLV2-11P01706 119 aa12.11□□□□□ -0.47
TPM1-203ENST00000317516 PPT1P50897 306 aa12.11□□□□□ -0.47
TPM1-203ENST00000317516 ZNF80P51504 273 aaPredicted RBP12.11□□□□□ -0.47
TPM1-203ENST00000317516 RGS21Q2M5E4 152 aa12.11□□□□□ -0.47
TPM1-203ENST00000317516 AKR1C8PQ5T2L2 129 aa12.11□□□□□ -0.47
TPM1-203ENST00000317516 GATA1P15976 413 aaPredicted RBP12.1□□□□□ -0.47
TPM1-203ENST00000317516 Q6ZRN7 208 aaPredicted RBP12.1□□□□□ -0.47
TPM1-203ENST00000317516 NHLRC2Q8NBF2 726 aa12.1□□□□□ -0.47
TPM1-203ENST00000317516 PRADC1Q9BSG0 188 aa12.1□□□□□ -0.47
TPM1-203ENST00000317516 PGPEP1Q9NXJ5 209 aa12.1□□□□□ -0.47
TPM1-203ENST00000317516 BOLA1Q9Y3E2 137 aa12.1□□□□□ -0.47
TPM1-203ENST00000317516 ERVFC1-1P60608 527 aa12.09□□□□□ -0.47
TPM1-203ENST00000317516 PTH2Q96A98 100 aa12.09□□□□□ -0.47
TPM1-203ENST00000317516 C11orf21Q9P2W6 132 aa12.09□□□□□ -0.47
TPM1-203ENST00000317516 FABP5P3A8MUU1 101 aa12.08□□□□□ -0.48
TPM1-203ENST00000317516 RS1O15537 224 aa12.08□□□□□ -0.48
TPM1-203ENST00000317516 DNAH10OSP0CZ25 163 aa12.08□□□□□ -0.48
TPM1-203ENST00000317516 TIRAPP58753 221 aa12.08□□□□□ -0.48
TPM1-203ENST00000317516 KRTAP10-2P60368 255 aa12.08□□□□□ -0.48
TPM1-203ENST00000317516 WFDC10BQ8IUB3 73 aa12.08□□□□□ -0.48
TPM1-203ENST00000317516 C10orf126Q8N4M7 172 aa12.08□□□□□ -0.48
TPM1-203ENST00000317516 HIST1H2BAQ96A08 127 aa12.08□□□□□ -0.48
TPM1-203ENST00000317516 C9orf85Q96MD7 179 aa12.08□□□□□ -0.48
TPM1-203ENST00000317516 MSRB1Q9NZV6 116 aa12.08□□□□□ -0.48
TPM1-203ENST00000317516 TRBV6-4A0A1B0GX49 114 aa12.07□□□□□ -0.48
TPM1-203ENST00000317516 S100A4P26447 101 aaKnown RBP12.07□□□□□ -0.48
TPM1-203ENST00000317516 RHOHQ15669 191 aa12.07□□□□□ -0.48
TPM1-203ENST00000317516 ZNF726P1Q15940 193 aa12.07□□□□□ -0.48
TPM1-203ENST00000317516 CFAP126Q5VTH2 177 aa12.07□□□□□ -0.48
TPM1-203ENST00000317516 SLC25A29Q8N8R3 303 aa12.07□□□□□ -0.48
TPM1-203ENST00000317516 LINC00479Q96M42 142 aa12.07□□□□□ -0.48
TPM1-203ENST00000317516 TNFRSF18Q9Y5U5 241 aa12.07□□□□□ -0.48
TPM1-203ENST00000317516 DYNC1H1Q14204 4646 aaKnown RBP12.07□□□□□ -0.48
TPM1-203ENST00000317516 TRAV34A0A0B4J273 112 aa12.06□□□□□ -0.48
TPM1-203ENST00000317516 LOC100131303A0A0U1RQF7 123 aa12.06□□□□□ -0.48
TPM1-203ENST00000317516 PEX7O00628 323 aa12.06□□□□□ -0.48
TPM1-203ENST00000317516 ARPC5O15511 151 aa12.06□□□□□ -0.48
TPM1-203ENST00000317516 UBE2G2P60604 165 aa12.06□□□□□ -0.48
TPM1-203ENST00000317516 STOML3Q8TAV4 291 aa12.06□□□□□ -0.48
TPM1-203ENST00000317516 ARL2-SNX15V9GYD0 113 aa12.06□□□□□ -0.48
TPM1-203ENST00000317516 TRAV8-6A0A0B4J262 113 aa12.05□□□□□ -0.48
TPM1-203ENST00000317516 PGPEP1LA6NFU8 196 aa12.05□□□□□ -0.48
TPM1-203ENST00000317516 CRYGDP07320 174 aa12.05□□□□□ -0.48
TPM1-203ENST00000317516 MGST1P10620 155 aaKnown RBP12.05□□□□□ -0.48
TPM1-203ENST00000317516 RNASE3P12724 160 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms