RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 KNTC1P50748 2209 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 F8VRH5 84 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 ACYP1P07311 99 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 CXCL5P42830 114 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 TCF15Q12870 199 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 PRNTQ86SH4 94 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 LINC00643Q86TS7 51 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 ASXL3Q9C0F0 2248 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 A0A0G2JNJ9 132 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 H3BT86 120 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 H7C1H1 209 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 IGHV4-39P01824 125 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 SAA1P0DJI8 122 aaPredicted RBP5.11□□□□□ -1.59
ZNF540-201ENST00000316433 LYZL1Q6UWQ5 148 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 C5orf38Q86SI9 138 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 C9orf106Q8NAJ2 232 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 DPH3P1Q9H4G8 78 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 Q9UFV3 132 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 XIRP2A4UGR9 3374 aa5.11□□□□□ -1.59
ZNF540-201ENST00000316433 PLAUP00749 431 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 IGHV3-33P01772 117 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 WT1P19544 449 aaPredicted RBP5.1□□□□□ -1.59
ZNF540-201ENST00000316433 RPL39P5Q59GN2 51 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 MRPL53Q96EL3 112 aaKnown RBP5.1□□□□□ -1.59
ZNF540-201ENST00000316433 IGHV3-30P01768 117 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 GRPP07492 148 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 ELANEP08246 267 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 IGHV3-30-5P0DP03 117 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 HIST1H4AP62805 103 aaKnown RBP5.1□□□□□ -1.59
ZNF540-201ENST00000316433 VKORC1Q9BQB6 163 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 UPK3BQ9BT76 320 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 HES7Q9BYE0 225 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 Q9H3A6 140 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 KIAA0100Q14667 2235 aaKnown RBP5.1□□□□□ -1.59
ZNF540-201ENST00000316433 TRAV12-1A0A0B4J245 112 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 H3BRN7 92 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 IGHV3-9P01782 118 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 COX6B1P14854 86 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 SPINK2P20155 84 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 NBL1P41271 181 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 MLANAQ16655 118 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 VMA21Q3ZAQ7 101 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 C6orf226Q5I0X4 101 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 SEM1Q6ZVN7 128 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 IL17RELQ6ZVW7 336 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 LINC00305Q7Z4B0 112 aa5.1□□□□□ -1.59
ZNF540-201ENST00000316433 MAFAQ8NHW3 353 aaPredicted RBP5.1□□□□□ -1.59
ZNF540-201ENST00000316433 A0A0J9YY99 117 aa5.09□□□□□ -1.59
ZNF540-201ENST00000316433 IGHV1-46P01743 117 aa5.09□□□□□ -1.59
ZNF540-201ENST00000316433 MSMPQ1L6U9 139 aa5.09□□□□□ -1.59
ZNF540-201ENST00000316433 CXorf67Q86X51 503 aaPredicted RBP5.09□□□□□ -1.59
ZNF540-201ENST00000316433 PRIMA1Q86XR5 153 aa5.09□□□□□ -1.59
ZNF540-201ENST00000316433 NPBQ8NG41 125 aa5.09□□□□□ -1.59
ZNF540-201ENST00000316433 SMCR5Q8TEV8 140 aa5.09□□□□□ -1.59
ZNF540-201ENST00000316433 IGHV4-4A0A075B6R2 117 aa5.09□□□□□ -1.6
ZNF540-201ENST00000316433 A0A0U1RRA0 63 aa5.09□□□□□ -1.6
ZNF540-201ENST00000316433 H7C2G1 150 aa5.09□□□□□ -1.6
ZNF540-201ENST00000316433 H7C423 109 aa5.09□□□□□ -1.6
ZNF540-201ENST00000316433 IGLV1-47P01700 117 aa5.09□□□□□ -1.6
ZNF540-201ENST00000316433 SCNM1Q9BWG6 230 aa5.09□□□□□ -1.6
ZNF540-201ENST00000316433 TMEM178BH3BS89 294 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 ZNF826PQ6ZT77 177 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 NEXN-AS1Q8NBZ9 246 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 IGHV3-43A0A0B4J1X8 118 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 C17orf100A8MU93 164 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 TEX22C9J3V5 150 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 I3L2K1 104 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 IGHV3-43DP0DP04 118 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 CCL8P80075 99 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 WT1-ASQ06250 92 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 Q1RN00 199 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 NSUN5P1Q3KNT7 163 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 LY6G5BQ8NDX9 201 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 TMEM263Q8WUH6 116 aaKnown RBP5.08□□□□□ -1.6
ZNF540-201ENST00000316433 C20orf173Q96LM9 149 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 DEFB108AA8MXU0 73 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 H3BTX0 84 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 PSMB8P28062 276 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 FBXL19-AS1Q494R0 122 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 SERP2Q8N6R1 65 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 IL17DQ8TAD2 202 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 RNF185Q96GF1 192 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 TP53TG1Q9Y2A0 90 aa5.08□□□□□ -1.6
ZNF540-201ENST00000316433 PRR14LQ5THK1 2151 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 MED12Q93074 2177 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 A0A0B4J2C4 111 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 A0A0U1RQV1 116 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 GAS8-AS1O95177 125 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 CD40P25942 277 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 CRIP1P50238 77 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 LINC01561Q8N1V8 128 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 TMEM105Q8N8V8 129 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 KLHL30-AS1Q8NEE0 82 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 SEC16AO15027 2179 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 RANBP2P49792 3224 aaKnown RBP5.07□□□□□ -1.6
ZNF540-201ENST00000316433 IGLV2-18A0A075B6J9 118 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 EIF4EBP3O60516 100 aaPredicted RBP5.07□□□□□ -1.6
ZNF540-201ENST00000316433 AVPP01185 164 aa5.07□□□□□ -1.6
ZNF540-201ENST00000316433 RPL18AQ02543 176 aaKnown RBP5.07□□□□□ -1.6
ZNF540-201ENST00000316433 LAGE3Q14657 143 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms