RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 WI2-2373I1.2A0A1W2PRP0 233 aa10□□□□□ -0.81
SH3PXD2A-201ENST00000315994 CCL25O15444 150 aa10□□□□□ -0.81
SH3PXD2A-201ENST00000315994 DEFB136Q30KP8 78 aa10□□□□□ -0.81
SH3PXD2A-201ENST00000315994 TMEM89A2RUT3 159 aa10□□□□□ -0.81
SH3PXD2A-201ENST00000315994 GAGE12JA6NER3 117 aa10□□□□□ -0.81
SH3PXD2A-201ENST00000315994 GAGE4Q13068 117 aa10□□□□□ -0.81
SH3PXD2A-201ENST00000315994 GAGE5Q13069 117 aa10□□□□□ -0.81
SH3PXD2A-201ENST00000315994 GAGE13Q4V321 117 aa10□□□□□ -0.81
SH3PXD2A-201ENST00000315994 C6orf226Q5I0X4 101 aa10□□□□□ -0.81
SH3PXD2A-201ENST00000315994 C2orf66Q6UXQ4 117 aa10□□□□□ -0.81
SH3PXD2A-201ENST00000315994 LRRC75A-AS1Q8N1F1 130 aa10□□□□□ -0.81
SH3PXD2A-201ENST00000315994 SDHAF1A6NFY7 115 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 CFHR3Q02985 330 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 C16orf54Q6UWD8 224 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 TRAV13-1A0A0B4J241 112 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 IGHV3-16A0A0C4DH30 117 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 ODF3BA8MYP8 253 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 F6UB75 175 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 ZNF561-AS1K7EIQ3 104 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 IGHG2P01859 326 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 SLURP1P55000 103 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 LOXL1Q08397 574 aaPredicted RBP9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 LMO4P61968 165 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 TRAV26-2A0A0B4J265 109 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 A0A0U1RRA0 63 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 BUB3O43684 328 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 GAGE7O76087 117 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 GAGE12FP0CL80 117 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 GAGE12GP0CL81 117 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 GAGE12IP0CL82 117 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 SPAG8Q99932 426 aaPredicted RBP9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 PYGO2Q9BRQ0 406 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 TIMM21Q9BVV7 248 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 TRBV25-1A0A075B6N4 114 aa9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 ZNF48Q96MX3 618 aaPredicted RBP9.99□□□□□ -0.81
SH3PXD2A-201ENST00000315994 P0C879 139 aa9.98□□□□□ -0.81
SH3PXD2A-201ENST00000315994 FREM1Q5H8C1 2179 aa9.98□□□□□ -0.81
SH3PXD2A-201ENST00000315994 E7EUB6 86 aa9.98□□□□□ -0.81
SH3PXD2A-201ENST00000315994 MORN5Q5VZ52 161 aa9.98□□□□□ -0.81
SH3PXD2A-201ENST00000315994 Q6ZPA2 131 aa9.98□□□□□ -0.81
SH3PXD2A-201ENST00000315994 C11orf1Q9H5F2 150 aa9.98□□□□□ -0.81
SH3PXD2A-201ENST00000315994 EGR2P11161 476 aaPredicted RBP9.98□□□□□ -0.81
SH3PXD2A-201ENST00000315994 COA6Q5JTJ3 125 aaKnown RBP9.98□□□□□ -0.81
SH3PXD2A-201ENST00000315994 PLA2G2EQ9NZK7 142 aa9.98□□□□□ -0.81
SH3PXD2A-201ENST00000315994 DOCK11Q5JSL3 2073 aa9.98□□□□□ -0.81
SH3PXD2A-201ENST00000315994 WIPF2Q8TF74 440 aaPredicted RBP9.98□□□□□ -0.81
SH3PXD2A-201ENST00000315994 DLX4Q92988 240 aaPredicted RBP9.98□□□□□ -0.81
SH3PXD2A-201ENST00000315994 KMT2EQ8IZD2 1858 aa9.97□□□□□ -0.81
SH3PXD2A-201ENST00000315994 MYMXA0A1B0GTQ4 84 aa9.97□□□□□ -0.81
SH3PXD2A-201ENST00000315994 M0R2P5 195 aa9.97□□□□□ -0.81
SH3PXD2A-201ENST00000315994 CFHR4Q92496 578 aa9.97□□□□□ -0.81
SH3PXD2A-201ENST00000315994 ASPHD1Q5U4P2 390 aa9.97□□□□□ -0.81
SH3PXD2A-201ENST00000315994 BCL6BQ8N143 479 aaPredicted RBP9.97□□□□□ -0.81
SH3PXD2A-201ENST00000315994 A6NDX4 124 aa9.97□□□□□ -0.81
SH3PXD2A-201ENST00000315994 K7EMT4 169 aa9.97□□□□□ -0.81
SH3PXD2A-201ENST00000315994 ZNF479Q96JC4 524 aa9.97□□□□□ -0.81
SH3PXD2A-201ENST00000315994 FAM167A-AS1Q96KT0 104 aa9.97□□□□□ -0.81
SH3PXD2A-201ENST00000315994 C20orf78Q9BR46 151 aa9.97□□□□□ -0.81
SH3PXD2A-201ENST00000315994 SIGLEC8Q9NYZ4 499 aa9.97□□□□□ -0.81
SH3PXD2A-201ENST00000315994 TEX48A0A1B0GUV7 120 aa9.96□□□□□ -0.81
SH3PXD2A-201ENST00000315994 ERG28Q9UKR5 140 aa9.96□□□□□ -0.81
SH3PXD2A-201ENST00000315994 NPYP01303 97 aa9.96□□□□□ -0.81
SH3PXD2A-201ENST00000315994 ZNRF2Q8NHG8 242 aa9.96□□□□□ -0.81
SH3PXD2A-201ENST00000315994 SMIM2Q9BVW6 85 aa9.96□□□□□ -0.81
SH3PXD2A-201ENST00000315994 OTOGLQ3ZCN5 2332 aa9.96□□□□□ -0.81
SH3PXD2A-201ENST00000315994 IGHV1-24A0A0C4DH33 117 aa9.96□□□□□ -0.82
SH3PXD2A-201ENST00000315994 TNFRSF13BO14836 293 aaPredicted RBP9.96□□□□□ -0.82
SH3PXD2A-201ENST00000315994 PAX4O43316 350 aa9.96□□□□□ -0.82
SH3PXD2A-201ENST00000315994 TSPAN13O95857 204 aa9.96□□□□□ -0.82
SH3PXD2A-201ENST00000315994 KIR3DS1Q14943 382 aa9.96□□□□□ -0.82
SH3PXD2A-201ENST00000315994 PMVKQ15126 192 aa9.96□□□□□ -0.82
SH3PXD2A-201ENST00000315994 ZFAND6Q6FIF0 208 aa9.96□□□□□ -0.82
SH3PXD2A-201ENST00000315994 K7EP13 123 aa9.96□□□□□ -0.82
SH3PXD2A-201ENST00000315994 NCOA6Q14686 2063 aaPredicted RBP9.96□□□□□ -0.82
SH3PXD2A-201ENST00000315994 IGHV4OR15-8A0A075B7B6 117 aa9.95□□□□□ -0.82
SH3PXD2A-201ENST00000315994 A0A087WW49 117 aa9.95□□□□□ -0.82
SH3PXD2A-201ENST00000315994 SHANK1Q9Y566 2161 aa9.95□□□□□ -0.82
SH3PXD2A-201ENST00000315994 IGKV1OR2-108A0A075B7D4 117 aa9.95□□□□□ -0.82
SH3PXD2A-201ENST00000315994 SFTA2Q6UW10 78 aa9.95□□□□□ -0.82
SH3PXD2A-201ENST00000315994 RNF152Q8N8N0 203 aa9.95□□□□□ -0.82
SH3PXD2A-201ENST00000315994 PKIGQ9Y2B9 76 aa9.95□□□□□ -0.82
SH3PXD2A-201ENST00000315994 GNRH2O43555 120 aa9.95□□□□□ -0.82
SH3PXD2A-201ENST00000315994 GPHB5Q86YW7 130 aa9.95□□□□□ -0.82
SH3PXD2A-201ENST00000315994 IGF2BP2-AS1Q96M15 143 aa9.95□□□□□ -0.82
SH3PXD2A-201ENST00000315994 DYSFO75923 2080 aa9.94□□□□□ -0.82
SH3PXD2A-201ENST00000315994 PROP1O75360 226 aa9.94□□□□□ -0.82
SH3PXD2A-201ENST00000315994 CHAC1Q9BUX1 264 aa9.94□□□□□ -0.82
SH3PXD2A-201ENST00000315994 TMEM243Q9BU79 118 aa9.94□□□□□ -0.82
SH3PXD2A-201ENST00000315994 C11orf71Q6IPW1 123 aa9.94□□□□□ -0.82
SH3PXD2A-201ENST00000315994 ADAMTSL5Q6ZMM2 481 aa9.94□□□□□ -0.82
SH3PXD2A-201ENST00000315994 BDP1A6H8Y1 2624 aa9.94□□□□□ -0.82
SH3PXD2A-201ENST00000315994 MRPL36Q9P0J6 103 aaKnown RBP9.94□□□□□ -0.82
SH3PXD2A-201ENST00000315994 NPC2P61916 151 aa9.93□□□□□ -0.82
SH3PXD2A-201ENST00000315994 C10orf126Q8N4M7 172 aa9.93□□□□□ -0.82
SH3PXD2A-201ENST00000315994 PCNX3Q9H6A9 2034 aa9.93□□□□□ -0.82
SH3PXD2A-201ENST00000315994 TRAV8-2A0A0B4J237 113 aa9.93□□□□□ -0.82
SH3PXD2A-201ENST00000315994 BRWD1-AS2P59051 145 aa9.93□□□□□ -0.82
SH3PXD2A-201ENST00000315994 ANKRD39Q53RE8 183 aa9.93□□□□□ -0.82
SH3PXD2A-201ENST00000315994 PRIMA1Q86XR5 153 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms