RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 DCTN5Q9BTE1 182 aa6.26□□□□□ -1.41
RSF1-201ENST00000308488 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 SDIM1Q6ZPB5 146 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 COL16A1Q07092 1604 aaPredicted RBP6.25□□□□□ -1.41
RSF1-201ENST00000308488 EFNA4P52798 201 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 IGKV1-6A0A0C4DH72 117 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 PROP1O75360 226 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 CRIPAKQ8N1N5 446 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 FOXF2Q12947 444 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 IGF2-ASQ6U949 168 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 Q8TAT8 98 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 Q6ZR03 302 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 IGLV3-32A0A0A0MS00 114 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 IGKV3OR2-268A0A0C4DH90 116 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 ZFP2Q6ZN57 461 aa6.25□□□□□ -1.41
RSF1-201ENST00000308488 COL11A2P13942 1736 aaPredicted RBP6.24□□□□□ -1.41
RSF1-201ENST00000308488 TRBV6-1A0A0K0K1D8 114 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 IGKV1-39P01597 117 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 IGKV1D-39P04432 117 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 IGHV1-69DA0A0B4J2H0 117 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 ITLN1Q8WWA0 313 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 IGHV3-72A0A0B4J1Y9 119 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 LOC107984640A0A0U1RRK4 108 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 PRR20EP86478 221 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 PRR20CP86479 221 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 PRR20DP86480 221 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 PRR20BP86481 221 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 PRR20AP86496 221 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 C1orf210Q8IVY1 113 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 KLF14Q8TD94 323 aaPredicted RBP6.24□□□□□ -1.41
RSF1-201ENST00000308488 WFDC9Q8NEX5 89 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 CDIP1Q9H305 208 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 IGHV1OR21-1A0A087WYE8 117 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 LINC00473A8K010 186 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 TRAV23DV6A0A075B6W5 121 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.24□□□□□ -1.41
RSF1-201ENST00000308488 MRPS12O15235 138 aaKnown RBP6.24□□□□□ -1.41
RSF1-201ENST00000308488 PRR7Q8TB68 274 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 ERCC8Q13216 396 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 Q6JHZ5 121 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 TMEM167AQ8TBQ9 72 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 C8orf49Q96NF6 230 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 IGKV3D-20A0A0C4DH25 116 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 CELA2AP08217 269 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 MDFICQ9P1T7 246 aa6.24□□□□□ -1.41
RSF1-201ENST00000308488 IGKV3D-15A0A087WSY6 115 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 WIPF1O43516 503 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 IGKV3-15P01624 115 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 KIR2DL5BQ8NHK3 375 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 IMMP1LQ96LU5 166 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 IGHV1-45A0A0A0MS14 117 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 JMJD7-PLA2G4BH0Y9G9 81 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 Q6ZS52 159 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 COL5A3P25940 1745 aaPredicted RBP6.23□□□□□ -1.41
RSF1-201ENST00000308488 COL5A1P20908 1838 aaPredicted RBP6.23□□□□□ -1.41
RSF1-201ENST00000308488 COX7A2LO14548 114 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 ADAMTS20P59510 1910 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 LINC00310P59036 64 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 IGKV3-7A0A075B6H7 116 aa6.23□□□□□ -1.41
RSF1-201ENST00000308488 LOXL1Q08397 574 aaPredicted RBP6.23□□□□□ -1.41
RSF1-201ENST00000308488 TRAV17A0A0B4J275 112 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 RNF144BQ7Z419 303 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 THAP8Q8NA92 274 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 FRMD6-AS1P0C7T7 363 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 C6orf226Q5I0X4 101 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 TRBV30A0A0K0K1B3 111 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 TRBV7-7A0A0K0K1E9 115 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 ACANP16112 2415 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 TRBV12-3P01733 135 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 GDF5OSQ5U4N7 250 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 TTTY13Q9BZ97 58 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 F8WEM9 126 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 I3L3M4 83 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 ZNF876PQ49A33 203 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 MRPL14Q6P1L8 145 aaKnown RBP6.22□□□□□ -1.41
RSF1-201ENST00000308488 NCOR2Q9Y618 2525 aa6.22□□□□□ -1.41
RSF1-201ENST00000308488 BLCAPP62952 87 aa6.21□□□□□ -1.41
RSF1-201ENST00000308488 FOXE3Q13461 319 aa6.21□□□□□ -1.41
RSF1-201ENST00000308488 INS-IGF2F8WCM5 200 aa6.21□□□□□ -1.42
RSF1-201ENST00000308488 IGFBP4P22692 258 aa6.21□□□□□ -1.42
RSF1-201ENST00000308488 PMS2CLQ68D20 193 aa6.21□□□□□ -1.42
RSF1-201ENST00000308488 MBD6Q96DN6 1003 aa6.21□□□□□ -1.42
RSF1-201ENST00000308488 Q6ZQT7 251 aa6.2□□□□□ -1.42
RSF1-201ENST00000308488 C9orf139Q6ZV77 190 aa6.2□□□□□ -1.42
RSF1-201ENST00000308488 ANKRD17O75179 2603 aaKnown RBP6.2□□□□□ -1.42
RSF1-201ENST00000308488 NXPH4O95158 308 aa6.2□□□□□ -1.42
RSF1-201ENST00000308488 TOMM6Q96B49 74 aa6.2□□□□□ -1.42
RSF1-201ENST00000308488 BDP1A6H8Y1 2624 aa6.2□□□□□ -1.42
RSF1-201ENST00000308488 ADARB2-AS1A8MUL3 147 aa6.2□□□□□ -1.42
RSF1-201ENST00000308488 SUMO4Q6EEV6 95 aa6.2□□□□□ -1.42
RSF1-201ENST00000308488 TRBV7-1A0A0A6YYK4 115 aa6.2□□□□□ -1.42
RSF1-201ENST00000308488 NDUFS5O43920 106 aa6.2□□□□□ -1.42
RSF1-201ENST00000308488 RNF114Q9Y508 228 aa6.2□□□□□ -1.42
RSF1-201ENST00000308488 DIAPH2-AS1Q14236 149 aa6.19□□□□□ -1.42
RSF1-201ENST00000308488 TMEM61Q8N0U2 210 aa6.19□□□□□ -1.42
RSF1-201ENST00000308488 PRR25Q96S07 402 aa6.19□□□□□ -1.42
RSF1-201ENST00000308488 MBD3L4A6NDZ8 208 aaPredicted RBP6.19□□□□□ -1.42
RSF1-201ENST00000308488 MBD3L3A6NE82 208 aaPredicted RBP6.19□□□□□ -1.42
RSF1-201ENST00000308488 MBD3L5A6NJ08 208 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms