RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 GAGE6Q13070 117 aa12.6□□□□□ -0.39
CCDC8-201ENST00000307522 DOPEY1Q5JWR5 2465 aa12.6□□□□□ -0.39
CCDC8-201ENST00000307522 IGHV3OR16-10A0A075B7F0 116 aa12.6□□□□□ -0.39
CCDC8-201ENST00000307522 IGHV3-23P01764 117 aa12.6□□□□□ -0.39
CCDC8-201ENST00000307522 TEX29Q8N6K0 151 aa12.59□□□□□ -0.39
CCDC8-201ENST00000307522 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.59□□□□□ -0.39
CCDC8-201ENST00000307522 KLHL30-AS1Q8NEE0 82 aa12.59□□□□□ -0.39
CCDC8-201ENST00000307522 CRLF1O75462 422 aa12.59□□□□□ -0.39
CCDC8-201ENST00000307522 SCGB1D4Q6XE38 83 aa12.59□□□□□ -0.39
CCDC8-201ENST00000307522 TRBV19A0A075B6N1 114 aa12.58□□□□□ -0.39
CCDC8-201ENST00000307522 SRSF9Q13242 221 aaKnown RBP eCLIP12.58□□□□□ -0.39
CCDC8-201ENST00000307522 TEX36Q5VZQ5 186 aa12.58□□□□□ -0.39
CCDC8-201ENST00000307522 ZFAND6Q6FIF0 208 aa12.58□□□□□ -0.39
CCDC8-201ENST00000307522 SIGLEC15Q6ZMC9 328 aa12.58□□□□□ -0.39
CCDC8-201ENST00000307522 ZNF493Q6ZR52 646 aa12.58□□□□□ -0.39
CCDC8-201ENST00000307522 OR4C13Q8NGP0 309 aa12.58□□□□□ -0.39
CCDC8-201ENST00000307522 RASL11BQ9BPW5 248 aa12.58□□□□□ -0.39
CCDC8-201ENST00000307522 CHD6Q8TD26 2715 aa12.58□□□□□ -0.4
CCDC8-201ENST00000307522 TRGV3P03979 118 aa12.58□□□□□ -0.4
CCDC8-201ENST00000307522 NHLRC4P0CG21 123 aaPredicted RBP12.58□□□□□ -0.4
CCDC8-201ENST00000307522 DLX4Q92988 240 aaPredicted RBP12.58□□□□□ -0.4
CCDC8-201ENST00000307522 PLEKHB2Q96CS7 222 aa12.58□□□□□ -0.4
CCDC8-201ENST00000307522 NCBP2LA6PVI3 153 aaKnown RBP12.58□□□□□ -0.4
CCDC8-201ENST00000307522 NRGNQ92686 78 aa12.58□□□□□ -0.4
CCDC8-201ENST00000307522 U3KQK5 164 aa12.58□□□□□ -0.4
CCDC8-201ENST00000307522 RNF185Q96GF1 192 aa12.57□□□□□ -0.4
CCDC8-201ENST00000307522 BRI3O95415 125 aa12.57□□□□□ -0.4
CCDC8-201ENST00000307522 IGLV2-23P01705 113 aa12.57□□□□□ -0.4
CCDC8-201ENST00000307522 Q6ZQT7 251 aa12.57□□□□□ -0.4
CCDC8-201ENST00000307522 TRAV4A0A0B4J268 109 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 A0A1B0GW15 77 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 OR11H12B2RN74 326 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 B9A039 149 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 OR11H1Q8NG94 326 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 OR11H2Q8NH07 326 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 TMEM167AQ8TBQ9 72 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 TRGV9Q99603 122 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 TRBV7-3A0A075B6L6 115 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 ANKRD29Q8N6D5 301 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 SCGB1C2P0DMR2 95 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 IGHV1-8P0DP01 117 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 HES1Q14469 280 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 PLGLAQ15195 96 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 ZMAT4Q9H898 229 aa12.56□□□□□ -0.4
CCDC8-201ENST00000307522 RPL27AP46776 148 aaKnown RBP12.55□□□□□ -0.4
CCDC8-201ENST00000307522 ERCC8Q13216 396 aa12.55□□□□□ -0.4
CCDC8-201ENST00000307522 J3KRW8 73 aa12.55□□□□□ -0.4
CCDC8-201ENST00000307522 TCL1BO95988 128 aa12.55□□□□□ -0.4
CCDC8-201ENST00000307522 RPL32P62910 135 aaKnown RBP12.55□□□□□ -0.4
CCDC8-201ENST00000307522 FBXL15Q9H469 300 aa12.55□□□□□ -0.4
CCDC8-201ENST00000307522 UCNP55089 124 aa12.54□□□□□ -0.4
CCDC8-201ENST00000307522 MYO9AB2RTY4 2548 aa12.54□□□□□ -0.4
CCDC8-201ENST00000307522 IGHV3OR16-13A0A075B7E8 117 aa12.54□□□□□ -0.4
CCDC8-201ENST00000307522 IGHV3-74A0A0B4J1X5 117 aa12.54□□□□□ -0.4
CCDC8-201ENST00000307522 TRAV8-2A0A0B4J237 113 aa12.54□□□□□ -0.4
CCDC8-201ENST00000307522 IGKV1-17P01599 117 aa12.54□□□□□ -0.4
CCDC8-201ENST00000307522 CRIP2P52943 208 aaPredicted RBP12.54□□□□□ -0.4
CCDC8-201ENST00000307522 ZNF833PQ6ZTB9 187 aa12.54□□□□□ -0.4
CCDC8-201ENST00000307522 RAX2Q96IS3 184 aa12.54□□□□□ -0.4
CCDC8-201ENST00000307522 MYOZ3Q8TDC0 251 aa12.54□□□□□ -0.4
CCDC8-201ENST00000307522 ANKRD17O75179 2603 aaKnown RBP12.53□□□□□ -0.4
CCDC8-201ENST00000307522 MRGPRG-AS1Q2M3A8 158 aa12.53□□□□□ -0.4
CCDC8-201ENST00000307522 DTX2Q86UW9 622 aa12.53□□□□□ -0.4
CCDC8-201ENST00000307522 ACANP16112 2415 aa12.53□□□□□ -0.4
CCDC8-201ENST00000307522 ZNF815PA8K554 130 aa12.52□□□□□ -0.4
CCDC8-201ENST00000307522 TNFRSF13BO14836 293 aaPredicted RBP12.52□□□□□ -0.4
CCDC8-201ENST00000307522 ATP5IP56385 69 aaPredicted RBP12.52□□□□□ -0.4
CCDC8-201ENST00000307522 VMA21Q3ZAQ7 101 aa12.52□□□□□ -0.4
CCDC8-201ENST00000307522 TRPT1Q86TN4 253 aaKnown RBP12.52□□□□□ -0.4
CCDC8-201ENST00000307522 LGALS1P09382 135 aaKnown RBP12.52□□□□□ -0.41
CCDC8-201ENST00000307522 TMEM78Q5T7P6 136 aa12.52□□□□□ -0.41
CCDC8-201ENST00000307522 PPDPFLQ8WWR9 84 aa12.52□□□□□ -0.41
CCDC8-201ENST00000307522 FBN2P35556 2912 aa12.52□□□□□ -0.41
CCDC8-201ENST00000307522 IGHV3-66A0A0C4DH42 116 aa12.51□□□□□ -0.41
CCDC8-201ENST00000307522 MYMXA0A1B0GTQ4 84 aa12.51□□□□□ -0.41
CCDC8-201ENST00000307522 SLC25A16P16260 332 aa12.51□□□□□ -0.41
CCDC8-201ENST00000307522 TMEM155Q4W5P6 130 aa12.51□□□□□ -0.41
CCDC8-201ENST00000307522 FAM159AQ6UWV7 190 aa12.51□□□□□ -0.41
CCDC8-201ENST00000307522 HOXB4P17483 251 aaPredicted RBP12.51□□□□□ -0.41
CCDC8-201ENST00000307522 BEX4Q9NWD9 120 aaPredicted RBP12.51□□□□□ -0.41
CCDC8-201ENST00000307522 CRYGCP07315 174 aa12.5□□□□□ -0.41
CCDC8-201ENST00000307522 AAMDCQ9H7C9 122 aa12.5□□□□□ -0.41
CCDC8-201ENST00000307522 ZNF688P0C7X2 276 aa12.5□□□□□ -0.41
CCDC8-201ENST00000307522 TEN1Q86WV5 123 aa12.5□□□□□ -0.41
CCDC8-201ENST00000307522 GATD1Q8NB37 220 aa12.5□□□□□ -0.41
CCDC8-201ENST00000307522 PRADC1Q9BSG0 188 aa12.5□□□□□ -0.41
CCDC8-201ENST00000307522 ID1P41134 155 aa12.49□□□□□ -0.41
CCDC8-201ENST00000307522 GAGE2BQ13066 116 aa12.49□□□□□ -0.41
CCDC8-201ENST00000307522 GAGE2EQ4V326 116 aa12.49□□□□□ -0.41
CCDC8-201ENST00000307522 RNF182Q8N6D2 247 aa12.49□□□□□ -0.41
CCDC8-201ENST00000307522 GAGE2DQ9UEU5 116 aa12.49□□□□□ -0.41
CCDC8-201ENST00000307522 C9JAW5 83 aa12.49□□□□□ -0.41
CCDC8-201ENST00000307522 PRR25Q96S07 402 aa12.49□□□□□ -0.41
CCDC8-201ENST00000307522 TIMM23O14925 209 aa12.49□□□□□ -0.41
CCDC8-201ENST00000307522 ZNF575Q86XF7 245 aa12.49□□□□□ -0.41
CCDC8-201ENST00000307522 RNF125Q96EQ8 232 aa12.49□□□□□ -0.41
CCDC8-201ENST00000307522 RAB1BQ9H0U4 201 aa12.49□□□□□ -0.41
CCDC8-201ENST00000307522 HIF1ANQ9NWT6 349 aa12.49□□□□□ -0.41
CCDC8-201ENST00000307522 A8MWV9 139 aa12.48□□□□□ -0.41
CCDC8-201ENST00000307522 ATP5LO75964 103 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms