RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 TIMM8BQ9Y5J9 83 aaPredicted RBP17.53■□□□□ 0.4
HOXC9-201ENST00000303450 TRBV20OR9-2A0A075B6H5 130 aa17.52■□□□□ 0.4
HOXC9-201ENST00000303450 TRGV11A0A075B6L2 103 aa17.52■□□□□ 0.4
HOXC9-201ENST00000303450 MGST1P10620 155 aaKnown RBP17.52■□□□□ 0.4
HOXC9-201ENST00000303450 FAM222AQ5U5X8 452 aa17.52■□□□□ 0.4
HOXC9-201ENST00000303450 PRR27Q6MZM9 219 aa17.52■□□□□ 0.4
HOXC9-201ENST00000303450 GSN-AS1Q9NRJ2 163 aa17.52■□□□□ 0.4
HOXC9-201ENST00000303450 DKK2Q9UBU2 259 aa17.52■□□□□ 0.4
HOXC9-201ENST00000303450 TEX48A0A1B0GUV7 120 aa17.52■□□□□ 0.39
HOXC9-201ENST00000303450 ORM1P02763 201 aa17.52■□□□□ 0.39
HOXC9-201ENST00000303450 IBA57Q5T440 356 aaKnown RBP17.52■□□□□ 0.39
HOXC9-201ENST00000303450 C11orf72Q8NBR9 251 aa17.52■□□□□ 0.39
HOXC9-201ENST00000303450 NOP10Q9NPE3 64 aaKnown RBP17.52■□□□□ 0.39
HOXC9-201ENST00000303450 PGPEP1LA6NFU8 196 aa17.51■□□□□ 0.39
HOXC9-201ENST00000303450 C9JCJ5 164 aa17.51■□□□□ 0.39
HOXC9-201ENST00000303450 GNRH2O43555 120 aa17.51■□□□□ 0.39
HOXC9-201ENST00000303450 IGLV2-8P01709 118 aa17.51■□□□□ 0.39
HOXC9-201ENST00000303450 LYRM9A8MSI8 78 aa17.5■□□□□ 0.39
HOXC9-201ENST00000303450 TYMSP04818 313 aa17.5■□□□□ 0.39
HOXC9-201ENST00000303450 NANOS2P60321 138 aaKnown RBP17.5■□□□□ 0.39
HOXC9-201ENST00000303450 ZNF415Q09FC8 603 aa17.5■□□□□ 0.39
HOXC9-201ENST00000303450 SMIM7Q9BQ49 75 aa17.5■□□□□ 0.39
HOXC9-201ENST00000303450 C9JQL5 133 aa17.49■□□□□ 0.39
HOXC9-201ENST00000303450 MDFICQ9P1T7 246 aa17.49■□□□□ 0.39
HOXC9-201ENST00000303450 IGKV3D-20A0A0C4DH25 116 aa17.48■□□□□ 0.39
HOXC9-201ENST00000303450 ZNF727A8MUV8 499 aa17.48■□□□□ 0.39
HOXC9-201ENST00000303450 B4DEV8 164 aa17.48■□□□□ 0.39
HOXC9-201ENST00000303450 TCL1AP56279 114 aa17.48■□□□□ 0.39
HOXC9-201ENST00000303450 BIN3Q9NQY0 253 aa17.48■□□□□ 0.39
HOXC9-201ENST00000303450 DNAH7Q8WXX0 4024 aa17.48■□□□□ 0.39
HOXC9-201ENST00000303450 M0R036 132 aa17.47■□□□□ 0.39
HOXC9-201ENST00000303450 DAZ2Q13117 558 aaKnown RBP17.47■□□□□ 0.39
HOXC9-201ENST00000303450 IGHV3-16A0A0C4DH30 117 aa17.47■□□□□ 0.39
HOXC9-201ENST00000303450 OCC1Q8TAD7 63 aa17.47■□□□□ 0.39
HOXC9-201ENST00000303450 MUC7Q8TAX7 377 aa17.47■□□□□ 0.39
HOXC9-201ENST00000303450 DAZAP1Q96EP5 407 aaKnown RBP17.47■□□□□ 0.39
HOXC9-201ENST00000303450 DEFB130BP0DP73 79 aa17.46■□□□□ 0.39
HOXC9-201ENST00000303450 DEFB130AP0DP74 79 aa17.46■□□□□ 0.39
HOXC9-201ENST00000303450 C12orf74Q32Q52 190 aa17.46■□□□□ 0.39
HOXC9-201ENST00000303450 LINC01559Q495D7 138 aa17.46■□□□□ 0.39
HOXC9-201ENST00000303450 KRBOX1C9JBD0 128 aa17.45■□□□□ 0.38
HOXC9-201ENST00000303450 DAD1P61803 113 aa17.45■□□□□ 0.38
HOXC9-201ENST00000303450 OR5I1Q13606 314 aa17.45■□□□□ 0.38
HOXC9-201ENST00000303450 FAM74A3Q4VXF1 159 aa17.45■□□□□ 0.38
HOXC9-201ENST00000303450 TMSB15BA0A087X1C1 80 aa17.43■□□□□ 0.38
HOXC9-201ENST00000303450 S100A4P26447 101 aaKnown RBP17.43■□□□□ 0.38
HOXC9-201ENST00000303450 Q6ZTC4 211 aa17.43■□□□□ 0.38
HOXC9-201ENST00000303450 SPXQ9BT56 116 aa17.43■□□□□ 0.38
HOXC9-201ENST00000303450 LY96Q9Y6Y9 160 aa17.43■□□□□ 0.38
HOXC9-201ENST00000303450 TRGV1A0A0A0MS02 117 aa17.42■□□□□ 0.38
HOXC9-201ENST00000303450 ASIPP42127 132 aa17.42■□□□□ 0.38
HOXC9-201ENST00000303450 SOHLH1Q5JUK2 328 aa17.42■□□□□ 0.38
HOXC9-201ENST00000303450 K7EN84 100 aa17.42■□□□□ 0.38
HOXC9-201ENST00000303450 SPINK4O60575 86 aa17.42■□□□□ 0.38
HOXC9-201ENST00000303450 Q6ZTI0 123 aa17.42■□□□□ 0.38
HOXC9-201ENST00000303450 GAGE12BA1L429 117 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 GRIFINA4D1Z8 144 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 C19orf71A6NCJ1 209 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 GAGE7O76087 117 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 GAGE12FP0CL80 117 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 GAGE12GP0CL81 117 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 GAGE12IP0CL82 117 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 RPL19P84098 196 aaKnown RBP17.41■□□□□ 0.38
HOXC9-201ENST00000303450 P01737 135 aa17.4■□□□□ 0.38
HOXC9-201ENST00000303450 TMEM241Q24JQ0 296 aa17.4■□□□□ 0.38
HOXC9-201ENST00000303450 LGALS9BQ3B8N2 356 aa17.4■□□□□ 0.38
HOXC9-201ENST00000303450 PHLDA1Q8WV24 401 aaPredicted RBP17.4■□□□□ 0.38
HOXC9-201ENST00000303450 MRPL16Q9NX20 251 aaKnown RBP17.4■□□□□ 0.38
HOXC9-201ENST00000303450 RNASE3P12724 160 aaKnown RBP17.39■□□□□ 0.37
HOXC9-201ENST00000303450 ZFAND6Q6FIF0 208 aa17.39■□□□□ 0.37
HOXC9-201ENST00000303450 LINC01551Q86U37 167 aa17.39■□□□□ 0.37
HOXC9-201ENST00000303450 LINC00612Q8N6U2 182 aa17.39■□□□□ 0.37
HOXC9-201ENST00000303450 SFTA3P0C7M3 94 aa17.38■□□□□ 0.37
HOXC9-201ENST00000303450 C9orf85Q96MD7 179 aa17.38■□□□□ 0.37
HOXC9-201ENST00000303450 NAT8Q9UHE5 227 aa17.38■□□□□ 0.37
HOXC9-201ENST00000303450 TRGV2A0A075B6R0 118 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 C3orf84H3BNL1 204 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 H3BVH4 76 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 M0R2P5 195 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 DNLZQ5SXM8 178 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 UQCC3Q6UW78 93 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 COMMD7Q86VX2 200 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 ZNF575Q86XF7 245 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 NUDT10Q8NFP7 164 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 OR2D3Q8NGH3 330 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 NUDT11Q96G61 164 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 RNASE7Q9H1E1 156 aaKnown RBP17.37■□□□□ 0.37
HOXC9-201ENST00000303450 TRAV10A0A0B4J240 114 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 IL36BQ9NZH7 164 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 LINC00862A6NCI5 91 aa17.36■□□□□ 0.37
HOXC9-201ENST00000303450 ARMS2P0C7Q2 107 aa17.36■□□□□ 0.37
HOXC9-201ENST00000303450 RPS20P60866 119 aaKnown RBP17.36■□□□□ 0.37
HOXC9-201ENST00000303450 RASL10AQ92737 203 aa17.36■□□□□ 0.37
HOXC9-201ENST00000303450 DEFB131BA0A096LNP1 70 aa17.35■□□□□ 0.37
HOXC9-201ENST00000303450 CXCL1P09341 107 aa17.35■□□□□ 0.37
HOXC9-201ENST00000303450 HTN3P15516 51 aa17.35■□□□□ 0.37
HOXC9-201ENST00000303450 XKRY2A2RUG3 117 aa17.34■□□□□ 0.37
HOXC9-201ENST00000303450 NUPR2A6NF83 97 aa17.34■□□□□ 0.37
HOXC9-201ENST00000303450 ATP5G1P05496 136 aa17.34■□□□□ 0.37
HOXC9-201ENST00000303450 ERVFC1-1P60608 527 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms