RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 TIMM8BQ9Y5J9 83 aaPredicted RBP17.53■□□□□ 0.4
HOXC9-201ENST00000303450 TRBV20OR9-2A0A075B6H5 130 aa17.52■□□□□ 0.4
HOXC9-201ENST00000303450 TRGV11A0A075B6L2 103 aa17.52■□□□□ 0.4
HOXC9-201ENST00000303450 MGST1P10620 155 aaKnown RBP17.52■□□□□ 0.4
HOXC9-201ENST00000303450 FAM222AQ5U5X8 452 aa17.52■□□□□ 0.4
HOXC9-201ENST00000303450 PRR27Q6MZM9 219 aa17.52■□□□□ 0.4
HOXC9-201ENST00000303450 GSN-AS1Q9NRJ2 163 aa17.52■□□□□ 0.4
HOXC9-201ENST00000303450 DKK2Q9UBU2 259 aa17.52■□□□□ 0.4
HOXC9-201ENST00000303450 TEX48A0A1B0GUV7 120 aa17.52■□□□□ 0.39
HOXC9-201ENST00000303450 ORM1P02763 201 aa17.52■□□□□ 0.39
HOXC9-201ENST00000303450 IBA57Q5T440 356 aaKnown RBP17.52■□□□□ 0.39
HOXC9-201ENST00000303450 C11orf72Q8NBR9 251 aa17.52■□□□□ 0.39
HOXC9-201ENST00000303450 NOP10Q9NPE3 64 aaKnown RBP17.52■□□□□ 0.39
HOXC9-201ENST00000303450 PGPEP1LA6NFU8 196 aa17.51■□□□□ 0.39
HOXC9-201ENST00000303450 C9JCJ5 164 aa17.51■□□□□ 0.39
HOXC9-201ENST00000303450 GNRH2O43555 120 aa17.51■□□□□ 0.39
HOXC9-201ENST00000303450 IGLV2-8P01709 118 aa17.51■□□□□ 0.39
HOXC9-201ENST00000303450 LYRM9A8MSI8 78 aa17.5■□□□□ 0.39
HOXC9-201ENST00000303450 TYMSP04818 313 aa17.5■□□□□ 0.39
HOXC9-201ENST00000303450 NANOS2P60321 138 aaKnown RBP17.5■□□□□ 0.39
HOXC9-201ENST00000303450 ZNF415Q09FC8 603 aa17.5■□□□□ 0.39
HOXC9-201ENST00000303450 SMIM7Q9BQ49 75 aa17.5■□□□□ 0.39
HOXC9-201ENST00000303450 C9JQL5 133 aa17.49■□□□□ 0.39
HOXC9-201ENST00000303450 MDFICQ9P1T7 246 aa17.49■□□□□ 0.39
HOXC9-201ENST00000303450 IGKV3D-20A0A0C4DH25 116 aa17.48■□□□□ 0.39
HOXC9-201ENST00000303450 ZNF727A8MUV8 499 aa17.48■□□□□ 0.39
HOXC9-201ENST00000303450 B4DEV8 164 aa17.48■□□□□ 0.39
HOXC9-201ENST00000303450 TCL1AP56279 114 aa17.48■□□□□ 0.39
HOXC9-201ENST00000303450 BIN3Q9NQY0 253 aa17.48■□□□□ 0.39
HOXC9-201ENST00000303450 DNAH7Q8WXX0 4024 aa17.48■□□□□ 0.39
HOXC9-201ENST00000303450 M0R036 132 aa17.47■□□□□ 0.39
HOXC9-201ENST00000303450 DAZ2Q13117 558 aaKnown RBP17.47■□□□□ 0.39
HOXC9-201ENST00000303450 IGHV3-16A0A0C4DH30 117 aa17.47■□□□□ 0.39
HOXC9-201ENST00000303450 OCC1Q8TAD7 63 aa17.47■□□□□ 0.39
HOXC9-201ENST00000303450 MUC7Q8TAX7 377 aa17.47■□□□□ 0.39
HOXC9-201ENST00000303450 DAZAP1Q96EP5 407 aaKnown RBP17.47■□□□□ 0.39
HOXC9-201ENST00000303450 DEFB130BP0DP73 79 aa17.46■□□□□ 0.39
HOXC9-201ENST00000303450 DEFB130AP0DP74 79 aa17.46■□□□□ 0.39
HOXC9-201ENST00000303450 C12orf74Q32Q52 190 aa17.46■□□□□ 0.39
HOXC9-201ENST00000303450 LINC01559Q495D7 138 aa17.46■□□□□ 0.39
HOXC9-201ENST00000303450 KRBOX1C9JBD0 128 aa17.45■□□□□ 0.38
HOXC9-201ENST00000303450 DAD1P61803 113 aa17.45■□□□□ 0.38
HOXC9-201ENST00000303450 OR5I1Q13606 314 aa17.45■□□□□ 0.38
HOXC9-201ENST00000303450 FAM74A3Q4VXF1 159 aa17.45■□□□□ 0.38
HOXC9-201ENST00000303450 TMSB15BA0A087X1C1 80 aa17.43■□□□□ 0.38
HOXC9-201ENST00000303450 S100A4P26447 101 aaKnown RBP17.43■□□□□ 0.38
HOXC9-201ENST00000303450 Q6ZTC4 211 aa17.43■□□□□ 0.38
HOXC9-201ENST00000303450 SPXQ9BT56 116 aa17.43■□□□□ 0.38
HOXC9-201ENST00000303450 LY96Q9Y6Y9 160 aa17.43■□□□□ 0.38
HOXC9-201ENST00000303450 TRGV1A0A0A0MS02 117 aa17.42■□□□□ 0.38
HOXC9-201ENST00000303450 ASIPP42127 132 aa17.42■□□□□ 0.38
HOXC9-201ENST00000303450 SOHLH1Q5JUK2 328 aa17.42■□□□□ 0.38
HOXC9-201ENST00000303450 K7EN84 100 aa17.42■□□□□ 0.38
HOXC9-201ENST00000303450 SPINK4O60575 86 aa17.42■□□□□ 0.38
HOXC9-201ENST00000303450 Q6ZTI0 123 aa17.42■□□□□ 0.38
HOXC9-201ENST00000303450 GAGE12BA1L429 117 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 GRIFINA4D1Z8 144 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 C19orf71A6NCJ1 209 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 GAGE7O76087 117 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 GAGE12FP0CL80 117 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 GAGE12GP0CL81 117 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 GAGE12IP0CL82 117 aa17.41■□□□□ 0.38
HOXC9-201ENST00000303450 RPL19P84098 196 aaKnown RBP17.41■□□□□ 0.38
HOXC9-201ENST00000303450 P01737 135 aa17.4■□□□□ 0.38
HOXC9-201ENST00000303450 TMEM241Q24JQ0 296 aa17.4■□□□□ 0.38
HOXC9-201ENST00000303450 LGALS9BQ3B8N2 356 aa17.4■□□□□ 0.38
HOXC9-201ENST00000303450 PHLDA1Q8WV24 401 aaPredicted RBP17.4■□□□□ 0.38
HOXC9-201ENST00000303450 MRPL16Q9NX20 251 aaKnown RBP17.4■□□□□ 0.38
HOXC9-201ENST00000303450 RNASE3P12724 160 aaKnown RBP17.39■□□□□ 0.37
HOXC9-201ENST00000303450 ZFAND6Q6FIF0 208 aa17.39■□□□□ 0.37
HOXC9-201ENST00000303450 LINC01551Q86U37 167 aa17.39■□□□□ 0.37
HOXC9-201ENST00000303450 LINC00612Q8N6U2 182 aa17.39■□□□□ 0.37
HOXC9-201ENST00000303450 SFTA3P0C7M3 94 aa17.38■□□□□ 0.37
HOXC9-201ENST00000303450 C9orf85Q96MD7 179 aa17.38■□□□□ 0.37
HOXC9-201ENST00000303450 NAT8Q9UHE5 227 aa17.38■□□□□ 0.37
HOXC9-201ENST00000303450 TRGV2A0A075B6R0 118 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 C3orf84H3BNL1 204 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 H3BVH4 76 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 M0R2P5 195 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 DNLZQ5SXM8 178 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 UQCC3Q6UW78 93 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 COMMD7Q86VX2 200 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 ZNF575Q86XF7 245 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 NUDT10Q8NFP7 164 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 OR2D3Q8NGH3 330 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 NUDT11Q96G61 164 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 RNASE7Q9H1E1 156 aaKnown RBP17.37■□□□□ 0.37
HOXC9-201ENST00000303450 TRAV10A0A0B4J240 114 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 IL36BQ9NZH7 164 aa17.37■□□□□ 0.37
HOXC9-201ENST00000303450 LINC00862A6NCI5 91 aa17.36■□□□□ 0.37
HOXC9-201ENST00000303450 ARMS2P0C7Q2 107 aa17.36■□□□□ 0.37
HOXC9-201ENST00000303450 RPS20P60866 119 aaKnown RBP17.36■□□□□ 0.37
HOXC9-201ENST00000303450 RASL10AQ92737 203 aa17.36■□□□□ 0.37
HOXC9-201ENST00000303450 DEFB131BA0A096LNP1 70 aa17.35■□□□□ 0.37
HOXC9-201ENST00000303450 CXCL1P09341 107 aa17.35■□□□□ 0.37
HOXC9-201ENST00000303450 HTN3P15516 51 aa17.35■□□□□ 0.37
HOXC9-201ENST00000303450 XKRY2A2RUG3 117 aa17.34■□□□□ 0.37
HOXC9-201ENST00000303450 NUPR2A6NF83 97 aa17.34■□□□□ 0.37
HOXC9-201ENST00000303450 ATP5G1P05496 136 aa17.34■□□□□ 0.37
HOXC9-201ENST00000303450 ERVFC1-1P60608 527 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms