RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 HIVEP2P31629 2446 aa17.01■□□□□ 0.31
VSTM4-201ENST00000298454 TRBV7-9A0A0J9YWB2 115 aa17.01■□□□□ 0.31
VSTM4-201ENST00000298454 ZNF324O75467 553 aaPredicted RBP17.01■□□□□ 0.31
VSTM4-201ENST00000298454 NIT1Q86X76 327 aa17.01■□□□□ 0.31
VSTM4-201ENST00000298454 CSN3P07498 182 aa17.01■□□□□ 0.31
VSTM4-201ENST00000298454 FAM104BQ5XKR9 115 aa17.01■□□□□ 0.31
VSTM4-201ENST00000298454 RNASEKQ6P5S7 137 aaKnown RBP17.01■□□□□ 0.31
VSTM4-201ENST00000298454 A0A0J9YX75 114 aa17■□□□□ 0.31
VSTM4-201ENST00000298454 IGKV3-20P01619 116 aa16.99■□□□□ 0.31
VSTM4-201ENST00000298454 OR10AG1Q8NH19 301 aa16.99■□□□□ 0.31
VSTM4-201ENST00000298454 KLLNB2CW77 178 aa16.98■□□□□ 0.31
VSTM4-201ENST00000298454 ANXA2RQ3ZCQ2 193 aa16.98■□□□□ 0.31
VSTM4-201ENST00000298454 GSN-AS1Q9NRJ2 163 aa16.98■□□□□ 0.31
VSTM4-201ENST00000298454 RNF114Q9Y508 228 aa16.98■□□□□ 0.31
VSTM4-201ENST00000298454 HSBP1O75506 76 aa16.98■□□□□ 0.31
VSTM4-201ENST00000298454 TMEM61Q8N0U2 210 aa16.98■□□□□ 0.31
VSTM4-201ENST00000298454 D6R8Y8 96 aa16.97■□□□□ 0.31
VSTM4-201ENST00000298454 H3BVH4 76 aa16.97■□□□□ 0.31
VSTM4-201ENST00000298454 FHL3Q13643 280 aa16.97■□□□□ 0.31
VSTM4-201ENST00000298454 MRPL51Q4U2R6 128 aaKnown RBP16.97■□□□□ 0.31
VSTM4-201ENST00000298454 EBLN2Q6P2I7 272 aa16.97■□□□□ 0.31
VSTM4-201ENST00000298454 TMEM191AQ9H0A3 160 aa16.97■□□□□ 0.31
VSTM4-201ENST00000298454 CCL24O00175 119 aa16.96■□□□□ 0.31
VSTM4-201ENST00000298454 DYNLRB2Q8TF09 96 aa16.96■□□□□ 0.31
VSTM4-201ENST00000298454 TIMM8BQ9Y5J9 83 aaPredicted RBP16.96■□□□□ 0.31
VSTM4-201ENST00000298454 TSSC4Q9Y5U2 329 aaPredicted RBP16.96■□□□□ 0.31
VSTM4-201ENST00000298454 OR5AL1P0C617 328 aa16.96■□□□□ 0.31
VSTM4-201ENST00000298454 DNLZQ5SXM8 178 aa16.96■□□□□ 0.31
VSTM4-201ENST00000298454 SNAI2O43623 268 aa16.95■□□□□ 0.3
VSTM4-201ENST00000298454 INAFM1C9JVW0 142 aa16.95■□□□□ 0.3
VSTM4-201ENST00000298454 SCGB1D1O95968 90 aa16.95■□□□□ 0.3
VSTM4-201ENST00000298454 U3KQK5 164 aa16.95■□□□□ 0.3
VSTM4-201ENST00000298454 DEFB114Q30KQ6 69 aa16.94■□□□□ 0.3
VSTM4-201ENST00000298454 RNF185Q96GF1 192 aa16.94■□□□□ 0.3
VSTM4-201ENST00000298454 SMKR1H3BMG3 65 aa16.94■□□□□ 0.3
VSTM4-201ENST00000298454 GNRH2O43555 120 aa16.94■□□□□ 0.3
VSTM4-201ENST00000298454 SPRY2O43597 315 aa16.94■□□□□ 0.3
VSTM4-201ENST00000298454 LINC00614P0C842 121 aa16.94■□□□□ 0.3
VSTM4-201ENST00000298454 PMCHL1Q16048 86 aa16.94■□□□□ 0.3
VSTM4-201ENST00000298454 M0R2Z0 102 aa16.93■□□□□ 0.3
VSTM4-201ENST00000298454 SPANXN1Q5VSR9 72 aa16.93■□□□□ 0.3
VSTM4-201ENST00000298454 DMRTA1Q5VZB9 504 aa16.93■□□□□ 0.3
VSTM4-201ENST00000298454 FOXI2Q6ZQN5 318 aa16.93■□□□□ 0.3
VSTM4-201ENST00000298454 ORMDL3Q8N138 153 aa16.93■□□□□ 0.3
VSTM4-201ENST00000298454 ODF3Q96PU9 254 aa16.93■□□□□ 0.3
VSTM4-201ENST00000298454 JMJD8Q96S16 334 aa16.93■□□□□ 0.3
VSTM4-201ENST00000298454 TRAV12-2A0A075B6T6 113 aa16.92■□□□□ 0.3
VSTM4-201ENST00000298454 TRAV12-3A0A0B4J271 114 aa16.92■□□□□ 0.3
VSTM4-201ENST00000298454 NDUFA7O95182 113 aa16.92■□□□□ 0.3
VSTM4-201ENST00000298454 RAB4AP20338 218 aa16.92■□□□□ 0.3
VSTM4-201ENST00000298454 LEPP41159 167 aa16.92■□□□□ 0.3
VSTM4-201ENST00000298454 DEFB131AP59861 70 aa16.92■□□□□ 0.3
VSTM4-201ENST00000298454 CD300EQ496F6 205 aaPredicted RBP16.92■□□□□ 0.3
VSTM4-201ENST00000298454 EVI2AP22794 236 aa16.92■□□□□ 0.3
VSTM4-201ENST00000298454 S100A4P26447 101 aaKnown RBP16.92■□□□□ 0.3
VSTM4-201ENST00000298454 ASIPP42127 132 aa16.92■□□□□ 0.3
VSTM4-201ENST00000298454 CHCHD1Q96BP2 118 aaKnown RBP16.92■□□□□ 0.3
VSTM4-201ENST00000298454 PRELID3AQ96N28 172 aa16.92■□□□□ 0.3
VSTM4-201ENST00000298454 SETD2Q9BYW2 2564 aaPredicted RBP16.92■□□□□ 0.3
VSTM4-201ENST00000298454 NCR2O95944 276 aa16.91■□□□□ 0.3
VSTM4-201ENST00000298454 CKS2P33552 79 aa16.91■□□□□ 0.3
VSTM4-201ENST00000298454 KRTDAPP60985 99 aa16.91■□□□□ 0.3
VSTM4-201ENST00000298454 IGHV4-4A0A075B6R2 117 aa16.91■□□□□ 0.3
VSTM4-201ENST00000298454 C7orf71A4D174 169 aa16.91■□□□□ 0.3
VSTM4-201ENST00000298454 KNCNA6PVL3 124 aa16.91■□□□□ 0.3
VSTM4-201ENST00000298454 PROK1P58294 105 aa16.91■□□□□ 0.3
VSTM4-201ENST00000298454 SPINK13Q1W4C9 94 aa16.91■□□□□ 0.3
VSTM4-201ENST00000298454 DUSP14O95147 198 aaKnown RBP16.9■□□□□ 0.3
VSTM4-201ENST00000298454 ZNF124Q15973 351 aa16.9■□□□□ 0.3
VSTM4-201ENST00000298454 TRAV2A0A0B4J234 112 aa16.89■□□□□ 0.3
VSTM4-201ENST00000298454 GAS8-AS1O95177 125 aa16.89■□□□□ 0.3
VSTM4-201ENST00000298454 CACNG7P62955 275 aa16.89■□□□□ 0.3
VSTM4-201ENST00000298454 S100A12P80511 92 aa16.89■□□□□ 0.3
VSTM4-201ENST00000298454 SORL1Q92673 2214 aa16.89■□□□□ 0.29
VSTM4-201ENST00000298454 IGHV1-24A0A0C4DH33 117 aa16.89■□□□□ 0.29
VSTM4-201ENST00000298454 LOC389332A0A1B0GUA5 103 aa16.89■□□□□ 0.29
VSTM4-201ENST00000298454 CDKN1BP46527 198 aa16.89■□□□□ 0.29
VSTM4-201ENST00000298454 FAM159AQ6UWV7 190 aa16.89■□□□□ 0.29
VSTM4-201ENST00000298454 AGRNO00468 2067 aa16.89■□□□□ 0.29
VSTM4-201ENST00000298454 RNASE3P12724 160 aaKnown RBP16.88■□□□□ 0.29
VSTM4-201ENST00000298454 AMTNQ6UX39 209 aa16.88■□□□□ 0.29
VSTM4-201ENST00000298454 M0R381 172 aa16.88■□□□□ 0.29
VSTM4-201ENST00000298454 NPYP01303 97 aa16.88■□□□□ 0.29
VSTM4-201ENST00000298454 IFI27P40305 119 aaPredicted RBP16.88■□□□□ 0.29
VSTM4-201ENST00000298454 PRSS3P2Q8NHM4 247 aa16.88■□□□□ 0.29
VSTM4-201ENST00000298454 C3orf79P0CE67 100 aa16.87■□□□□ 0.29
VSTM4-201ENST00000298454 SCRT2Q9NQ03 307 aa16.87■□□□□ 0.29
VSTM4-201ENST00000298454 MAP6D1Q9H9H5 199 aa16.87■□□□□ 0.29
VSTM4-201ENST00000298454 SIGLEC8Q9NYZ4 499 aa16.87■□□□□ 0.29
VSTM4-201ENST00000298454 PHLDA3Q9Y5J5 127 aa16.87■□□□□ 0.29
VSTM4-201ENST00000298454 ADARB2-AS1A8MUL3 147 aa16.86■□□□□ 0.29
VSTM4-201ENST00000298454 SMIM15Q7Z3B0 74 aa16.86■□□□□ 0.29
VSTM4-201ENST00000298454 MED14OSP0DP75 135 aa16.85■□□□□ 0.29
VSTM4-201ENST00000298454 TSPOP30536 169 aa16.85■□□□□ 0.29
VSTM4-201ENST00000298454 FXYD7P58549 80 aa16.85■□□□□ 0.29
VSTM4-201ENST00000298454 Q8N976 141 aa16.85■□□□□ 0.29
VSTM4-201ENST00000298454 ZNF256Q9Y2P7 627 aaPredicted RBP16.85■□□□□ 0.29
VSTM4-201ENST00000298454 HLA-DRB4P13762 266 aa16.85■□□□□ 0.29
VSTM4-201ENST00000298454 NSUN5P1Q3KNT7 163 aa16.85■□□□□ 0.29
VSTM4-201ENST00000298454 PRO1933Q9H354 126 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms