RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 RNASE6Q93091 150 aaKnown RBP10.37□□□□□ -0.75
RPUSD4-201ENST00000298317 PLEKHB2Q96CS7 222 aa10.37□□□□□ -0.75
RPUSD4-201ENST00000298317 KIR2DL4Q99706 377 aa10.37□□□□□ -0.75
RPUSD4-201ENST00000298317 LINC01548A6NM66 108 aa10.37□□□□□ -0.75
RPUSD4-201ENST00000298317 ORMDL2Q53FV1 153 aa10.37□□□□□ -0.75
RPUSD4-201ENST00000298317 SCGB3A1Q96QR1 104 aa10.37□□□□□ -0.75
RPUSD4-201ENST00000298317 SPANXA1Q9NS26 97 aa10.37□□□□□ -0.75
RPUSD4-201ENST00000298317 TRBV20-1A0A075B6N2 111 aa10.36□□□□□ -0.75
RPUSD4-201ENST00000298317 C5orf47Q569G3 176 aa10.36□□□□□ -0.75
RPUSD4-201ENST00000298317 MUC3AQ02505 3323 aa10.36□□□□□ -0.75
RPUSD4-201ENST00000298317 IGHV3-23P01764 117 aa10.36□□□□□ -0.75
RPUSD4-201ENST00000298317 ZNF688P0C7X2 276 aa10.36□□□□□ -0.75
RPUSD4-201ENST00000298317 SFTA2Q6UW10 78 aa10.36□□□□□ -0.75
RPUSD4-201ENST00000298317 SLC50A1Q9BRV3 221 aa10.36□□□□□ -0.75
RPUSD4-201ENST00000298317 TCL1BO95988 128 aa10.35□□□□□ -0.75
RPUSD4-201ENST00000298317 CTSGP08311 255 aa10.35□□□□□ -0.75
RPUSD4-201ENST00000298317 SCGB1D4Q6XE38 83 aa10.35□□□□□ -0.75
RPUSD4-201ENST00000298317 PIP4P1Q86T03 277 aa10.35□□□□□ -0.75
RPUSD4-201ENST00000298317 NDUFA11Q86Y39 141 aa10.35□□□□□ -0.75
RPUSD4-201ENST00000298317 BAALCQ8WXS3 180 aa10.35□□□□□ -0.75
RPUSD4-201ENST00000298317 RASL10AQ92737 203 aa10.35□□□□□ -0.75
RPUSD4-201ENST00000298317 ZGRF1Q86YA3 2104 aa10.35□□□□□ -0.75
RPUSD4-201ENST00000298317 RNF182Q8N6D2 247 aa10.35□□□□□ -0.75
RPUSD4-201ENST00000298317 KLK15Q9H2R5 256 aa10.35□□□□□ -0.75
RPUSD4-201ENST00000298317 TMEM262E9PQX1 116 aa10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 SCGB2A1O75556 95 aa10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 GAGE2BQ13066 116 aa10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 SRSF9Q13242 221 aaKnown RBP eCLIP10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 GAGE2EQ4V326 116 aa10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 VKORC1Q9BQB6 163 aa10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 AGPAT4-IT1Q9H0P7 198 aa10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 GAGE2DQ9UEU5 116 aa10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 A8MWV9 139 aa10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 IFITM1P13164 125 aa10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 SPANXN1Q5VSR9 72 aa10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 AJUBAQ96IF1 538 aa10.34□□□□□ -0.75
RPUSD4-201ENST00000298317 ZDBF2Q9HCK1 2354 aa10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 KALRNO60229 2985 aa10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 NDPQ00604 133 aa10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 ANKRD29Q8N6D5 301 aa10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 DYNLRB1Q9NP97 96 aa10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 CSDC2Q9Y534 153 aaKnown RBP10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 GPR179Q6PRD1 2367 aa10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 SUMO2P61956 95 aaKnown RBP10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 TTC32Q5I0X7 151 aa10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 PLA2G2CQ5R387 149 aa10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 FAM159AQ6UWV7 190 aa10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 ONECUT1Q9UBC0 465 aa10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 MSRB2Q9Y3D2 182 aa10.33□□□□□ -0.76
RPUSD4-201ENST00000298317 ZNF318Q5VUA4 2279 aa10.32□□□□□ -0.76
RPUSD4-201ENST00000298317 NRGNQ92686 78 aa10.32□□□□□ -0.76
RPUSD4-201ENST00000298317 IGHV3OR16-8A0A075B7F1 116 aa10.32□□□□□ -0.76
RPUSD4-201ENST00000298317 A0A0J9YY99 117 aa10.32□□□□□ -0.76
RPUSD4-201ENST00000298317 DEFB109BQ30KR1 87 aa10.32□□□□□ -0.76
RPUSD4-201ENST00000298317 C2orf66Q6UXQ4 117 aa10.32□□□□□ -0.76
RPUSD4-201ENST00000298317 BUB3O43684 328 aa10.31□□□□□ -0.76
RPUSD4-201ENST00000298317 RNF223E7ERA6 249 aa10.31□□□□□ -0.76
RPUSD4-201ENST00000298317 KLHL30-AS1Q8NEE0 82 aa10.31□□□□□ -0.76
RPUSD4-201ENST00000298317 H3BVH4 76 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 ROS1P08922 2347 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 CFC1BP0CG36 223 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 CFC1P0CG37 223 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 MEIG1Q5JSS6 88 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 Q6ZQT7 251 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 C10orf126Q8N4M7 172 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 ZFAND3Q9H8U3 227 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 DPM3Q9P2X0 92 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 TRAV8-2A0A0B4J237 113 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 IGHV3-30P01768 117 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 IGHV3-30-5P0DP03 117 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 Q6Q795 121 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 MRPL53Q96EL3 112 aaKnown RBP10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 TMEM126AQ9H061 195 aa10.3□□□□□ -0.76
RPUSD4-201ENST00000298317 DMXL2Q8TDJ6 3036 aa10.29□□□□□ -0.76
RPUSD4-201ENST00000298317 TRAV4A0A0B4J268 109 aa10.29□□□□□ -0.76
RPUSD4-201ENST00000298317 IGHV3-35A0A0C4DH35 117 aa10.29□□□□□ -0.76
RPUSD4-201ENST00000298317 SNCGO76070 127 aa10.29□□□□□ -0.76
RPUSD4-201ENST00000298317 CRYGDP07320 174 aa10.29□□□□□ -0.76
RPUSD4-201ENST00000298317 FAM57AQ8TBR7 257 aa10.29□□□□□ -0.76
RPUSD4-201ENST00000298317 TNRC18O15417 2968 aaPredicted RBP10.29□□□□□ -0.76
RPUSD4-201ENST00000298317 C9orf47Q6ZRZ4 202 aa10.29□□□□□ -0.76
RPUSD4-201ENST00000298317 RPL39LQ96EH5 51 aaKnown RBP10.29□□□□□ -0.76
RPUSD4-201ENST00000298317 IGLV4-69A0A075B6H9 119 aa10.28□□□□□ -0.76
RPUSD4-201ENST00000298317 E7EQL1 145 aa10.28□□□□□ -0.76
RPUSD4-201ENST00000298317 HES1Q14469 280 aa10.28□□□□□ -0.76
RPUSD4-201ENST00000298317 PRR30Q53SZ7 412 aaPredicted RBP10.28□□□□□ -0.76
RPUSD4-201ENST00000298317 PKDREJQ9NTG1 2253 aa10.28□□□□□ -0.76
RPUSD4-201ENST00000298317 A0A0G2JNJ9 132 aa10.28□□□□□ -0.76
RPUSD4-201ENST00000298317 C11orf86A6NJI1 115 aa10.28□□□□□ -0.76
RPUSD4-201ENST00000298317 IGFL3Q6UXB1 125 aa10.28□□□□□ -0.76
RPUSD4-201ENST00000298317 Q9UFV3 132 aa10.28□□□□□ -0.76
RPUSD4-201ENST00000298317 TRAV25A0A0B4J276 109 aa10.27□□□□□ -0.77
RPUSD4-201ENST00000298317 M0R381 172 aa10.27□□□□□ -0.77
RPUSD4-201ENST00000298317 ASIPP42127 132 aa10.27□□□□□ -0.77
RPUSD4-201ENST00000298317 Q6ZS46 218 aa10.27□□□□□ -0.77
RPUSD4-201ENST00000298317 LY6G5BQ8NDX9 201 aa10.27□□□□□ -0.77
RPUSD4-201ENST00000298317 CLPSL1A2RUU4 121 aa10.27□□□□□ -0.77
RPUSD4-201ENST00000298317 LYNX1G3V0Z9 82 aa10.27□□□□□ -0.77
RPUSD4-201ENST00000298317 WIPF1O43516 503 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 437.9 ms