RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ICOSQ9Y6W8 199 aa9.68□□□□□ -0.86
PCF11-201ENST00000298281 TRAV26-2A0A0B4J265 109 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 UBE2D1P51668 147 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 TRAV4A0A0B4J268 109 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 COLCA2A8K830 154 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 USP17L23D6RBM5 183 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 NTF4P34130 210 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 WFDC11Q8NEX6 87 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 RHOHQ15669 191 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 TMEM75Q8N9X5 138 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 PPDPFLQ8WWR9 84 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 CXCL1P09341 107 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 CR1LQ2VPA4 569 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 PRO1854Q9UHT4 67 aa9.67□□□□□ -0.86
PCF11-201ENST00000298281 YPEL3P61236 119 aaPredicted RBP9.67□□□□□ -0.86
PCF11-201ENST00000298281 LTAP01374 205 aa9.66□□□□□ -0.86
PCF11-201ENST00000298281 SRSF2Q01130 221 aaKnown RBP9.66□□□□□ -0.86
PCF11-201ENST00000298281 WDR90Q96KV7 1748 aa9.66□□□□□ -0.86
PCF11-201ENST00000298281 MST1P26927 711 aa9.66□□□□□ -0.86
PCF11-201ENST00000298281 PNRC2Q9NPJ4 139 aaKnown RBP9.66□□□□□ -0.86
PCF11-201ENST00000298281 C15orf62A8K5M9 175 aa9.66□□□□□ -0.86
PCF11-201ENST00000298281 IGKV3D-7A0A0C4DH55 119 aa9.66□□□□□ -0.86
PCF11-201ENST00000298281 Q86TA4 180 aa9.66□□□□□ -0.86
PCF11-201ENST00000298281 DEFB125Q8N687 156 aa9.66□□□□□ -0.86
PCF11-201ENST00000298281 CYTL1Q9NRR1 136 aa9.66□□□□□ -0.86
PCF11-201ENST00000298281 SERP1Q9Y6X1 66 aa9.66□□□□□ -0.86
PCF11-201ENST00000298281 PLXNB3Q9ULL4 1909 aa9.65□□□□□ -0.86
PCF11-201ENST00000298281 NCOR1P1Q9H4R4 102 aa9.65□□□□□ -0.86
PCF11-201ENST00000298281 COX7A2LO14548 114 aa9.65□□□□□ -0.86
PCF11-201ENST00000298281 GYPEP15421 78 aa9.65□□□□□ -0.86
PCF11-201ENST00000298281 Q6ZWC4 215 aa9.65□□□□□ -0.86
PCF11-201ENST00000298281 ZNF492Q9P255 531 aa9.65□□□□□ -0.86
PCF11-201ENST00000298281 IGKV1D-17A0A075B6S4 117 aa9.65□□□□□ -0.86
PCF11-201ENST00000298281 TRAV3A0A0B4J244 114 aa9.65□□□□□ -0.86
PCF11-201ENST00000298281 LINC00473A8K010 186 aa9.65□□□□□ -0.86
PCF11-201ENST00000298281 NCR3O14931 201 aa9.65□□□□□ -0.86
PCF11-201ENST00000298281 WIPF2Q8TF74 440 aaPredicted RBP9.65□□□□□ -0.86
PCF11-201ENST00000298281 C3orf79P0CE67 100 aa9.65□□□□□ -0.87
PCF11-201ENST00000298281 PIFOQ8TCI5 191 aa9.65□□□□□ -0.87
PCF11-201ENST00000298281 MGAMO43451 1857 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 UBE2V1Q13404 147 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 HIST2H2BCQ6DN03 193 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 ESM1Q9NQ30 184 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 NPBQ8NG41 125 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 MESP1Q9BRJ9 268 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 A0A0J9YWU9 116 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 SPART-AS1P0CW21 52 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 TMEM14BQ9NUH8 114 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 SDHAF1A6NFY7 115 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 J3QLI3 93 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 ZFP2Q6ZN57 461 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 SS18L2Q9UHA2 77 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.64□□□□□ -0.87
PCF11-201ENST00000298281 IGKV2-29A2NJV5 120 aaPredicted RBP9.64□□□□□ -0.87
PCF11-201ENST00000298281 COL8A2P25067 703 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 ZNF134P52741 427 aa9.64□□□□□ -0.87
PCF11-201ENST00000298281 CEP192Q8TEP8 1941 aa9.63□□□□□ -0.87
PCF11-201ENST00000298281 LYL1P12980 280 aa9.63□□□□□ -0.87
PCF11-201ENST00000298281 U3KQE9 123 aa9.63□□□□□ -0.87
PCF11-201ENST00000298281 FOXL2NBQ6ZUU3 175 aa9.63□□□□□ -0.87
PCF11-201ENST00000298281 SLC25A29Q8N8R3 303 aa9.63□□□□□ -0.87
PCF11-201ENST00000298281 ATP6V0E1O15342 81 aa9.63□□□□□ -0.87
PCF11-201ENST00000298281 A0A0G2JMZ2 1700 aa9.63□□□□□ -0.87
PCF11-201ENST00000298281 LRRC37A2A6NM11 1700 aa9.63□□□□□ -0.87
PCF11-201ENST00000298281 A0A087WV48 116 aa9.63□□□□□ -0.87
PCF11-201ENST00000298281 MRPL55Q7Z7F7 128 aaKnown RBP9.63□□□□□ -0.87
PCF11-201ENST00000298281 PRSS46E5RG02 174 aa9.62□□□□□ -0.87
PCF11-201ENST00000298281 MRPL23Q16540 153 aaKnown RBP9.62□□□□□ -0.87
PCF11-201ENST00000298281 C2orf66Q6UXQ4 117 aa9.62□□□□□ -0.87
PCF11-201ENST00000298281 CEND1Q8N111 149 aa9.62□□□□□ -0.87
PCF11-201ENST00000298281 ZC2HC1AQ96GY0 325 aa9.62□□□□□ -0.87
PCF11-201ENST00000298281 H3BQ85 93 aa9.62□□□□□ -0.87
PCF11-201ENST00000298281 DLEU1O43261 78 aa9.62□□□□□ -0.87
PCF11-201ENST00000298281 Q0VG73 95 aa9.62□□□□□ -0.87
PCF11-201ENST00000298281 HS3ST6Q96QI5 342 aa9.62□□□□□ -0.87
PCF11-201ENST00000298281 F8W1H4 67 aa9.62□□□□□ -0.87
PCF11-201ENST00000298281 C8orf86Q6ZUL3 223 aa9.62□□□□□ -0.87
PCF11-201ENST00000298281 KIR2DL5BA0A0G2JN68 375 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 KIR2DL5BA0A0G2JPC4 375 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 C9JQL5 133 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 NDUFA4O00483 81 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 HLA-DMBP28068 263 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 QRFPP83859 136 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 ETDBQ3ZM63 59 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 KIR2DL5AQ8N109 375 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 IGHV1-69DA0A0B4J2H0 117 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 IGHV1-69P01742 117 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 UBE2D3P61077 147 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 AMTNQ6UX39 209 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 E7EQL1 145 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 CRIPAKQ8N1N5 446 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 Q9H8V8 135 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 COL4A1P02462 1669 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 PRYO14603 147 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
PCF11-201ENST00000298281 B3GALT5-AS1P59052 145 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 LYPD2Q6UXB3 125 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 MRPL53Q96EL3 112 aaKnown RBP9.6□□□□□ -0.87
PCF11-201ENST00000298281 MLST8Q9BVC4 326 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 A0A096LNI7 61 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms