RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 RSPO3Q9BXY4 272 aaPredicted RBP5.41□□□□□ -1.54
GAPVD1-202ENST00000297933 ANAPC1Q9H1A4 1944 aa5.41□□□□□ -1.54
GAPVD1-202ENST00000297933 CACNA1DQ01668 2161 aa5.41□□□□□ -1.54
GAPVD1-202ENST00000297933 DEFB4AO15263 64 aa5.41□□□□□ -1.54
GAPVD1-202ENST00000297933 SHISA2Q6UWI4 295 aa5.41□□□□□ -1.54
GAPVD1-202ENST00000297933 Q8N9W7 124 aa5.41□□□□□ -1.54
GAPVD1-202ENST00000297933 MPDZO75970 2070 aa5.41□□□□□ -1.54
GAPVD1-202ENST00000297933 FXYD5Q96DB9 178 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 SPRY2O43597 315 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 IGHV4-31P0DP07 118 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 C21orf62-AS1Q17RA5 79 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 ADAMTSL5Q6ZMM2 481 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 WFDC11Q8NEX6 87 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 C17orf77Q96MU5 243 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 SPRY4Q9C004 299 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 AKAP6Q13023 2319 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 DOCK7Q96N67 2140 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 IGKV2-29A2NJV5 120 aaPredicted RBP5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 C4orf48Q5BLP8 95 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 PRSS57Q6UWY2 283 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 NDUFA12Q9UI09 145 aa5.4□□□□□ -1.54
GAPVD1-202ENST00000297933 ETDCA0A1B0GVM5 59 aa5.4□□□□□ -1.55
GAPVD1-202ENST00000297933 SOCS3O14543 225 aa5.4□□□□□ -1.55
GAPVD1-202ENST00000297933 DEFB105AQ8NG35 78 aa5.4□□□□□ -1.55
GAPVD1-202ENST00000297933 C1orf147Q96MC9 270 aaPredicted RBP5.4□□□□□ -1.55
GAPVD1-202ENST00000297933 MEGF9Q9H1U4 602 aa5.4□□□□□ -1.55
GAPVD1-202ENST00000297933 USF3Q68DE3 2245 aa5.4□□□□□ -1.55
GAPVD1-202ENST00000297933 POLEQ07864 2286 aa5.4□□□□□ -1.55
GAPVD1-202ENST00000297933 NDUFS5O43920 106 aa5.4□□□□□ -1.55
GAPVD1-202ENST00000297933 IGLV3-1P01715 115 aa5.4□□□□□ -1.55
GAPVD1-202ENST00000297933 HIST2H2BCQ6DN03 193 aa5.4□□□□□ -1.55
GAPVD1-202ENST00000297933 C11orf45Q8TAV5 145 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 CFHR4Q92496 578 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 RITA1Q96K30 269 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 FANCD2OSQ96PS1 177 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 AGPAT4-IT1Q9H0P7 198 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 HHLA3Q9XRX5 114 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 IGLV10-54A0A075B6I4 117 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 HIST1H2BLQ99880 126 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 LENEPQ9Y5L5 61 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 TP53BP1Q12888 1972 aaPredicted RBP5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 KIF26AQ9ULI4 1882 aaPredicted RBP5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 C3orf79P0CE67 100 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 C16orf54Q6UWD8 224 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 CYYR1Q96J86 154 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 C20orf78Q9BR46 151 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 SIRPDQ9H106 197 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 IGLV11-55A0A075B6I3 123 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 AMTNQ6UX39 209 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 DSCR8Q96T75 97 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 MRPL36Q9P0J6 103 aaKnown RBP5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 RIF1Q5UIP0 2472 aaKnown RBP5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 INAFM2P0DMQ5 153 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 UBE2AP49459 152 aa5.39□□□□□ -1.55
GAPVD1-202ENST00000297933 A0A087X0K7 114 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 LY6G6DO95868 133 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 DAZ2Q13117 558 aaKnown RBP5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 DAZ4Q86SG3 579 aaKnown RBP5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 Q8N7P7 452 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 DAZ3Q9NR90 486 aaKnown RBP5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 A6NDX4 124 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 K7EMT4 169 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 GAGE2BQ13066 116 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 COX7A2LO14548 114 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 IGHG2P01859 326 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 HILS1P60008 231 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 C5orf38Q86SI9 138 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 RNF138Q8WVD3 245 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 NAA38Q9BRA0 125 aaKnown RBP5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 I3L2K1 104 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 KIAA2026Q5HYC2 2103 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 GPHB5Q86YW7 130 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 HIST3H2BBQ8N257 126 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 STPG4Q8N801 248 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 PRO3102Q9H379 93 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 ADAMTS9Q9P2N4 1935 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 TNFRSF13BO14836 293 aaPredicted RBP5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 DEFB125Q8N687 156 aa5.38□□□□□ -1.55
GAPVD1-202ENST00000297933 SLC25A29Q8N8R3 303 aa5.37□□□□□ -1.55
GAPVD1-202ENST00000297933 FAM231DQ6ZW35 169 aa5.37□□□□□ -1.55
GAPVD1-202ENST00000297933 TIMM17AQ99595 171 aa5.37□□□□□ -1.55
GAPVD1-202ENST00000297933 ZNF407Q9C0G0 2248 aa5.37□□□□□ -1.55
GAPVD1-202ENST00000297933 UBE2CO00762 179 aa5.37□□□□□ -1.55
GAPVD1-202ENST00000297933 C9JAW5 83 aa5.37□□□□□ -1.55
GAPVD1-202ENST00000297933 LTAP01374 205 aa5.37□□□□□ -1.55
GAPVD1-202ENST00000297933 CRYGCP07315 174 aa5.37□□□□□ -1.55
GAPVD1-202ENST00000297933 Q6YL49 198 aa5.37□□□□□ -1.55
GAPVD1-202ENST00000297933 SMIM27A0A1W2PRY6 76 aa5.36□□□□□ -1.55
GAPVD1-202ENST00000297933 K7EIM0 57 aa5.36□□□□□ -1.55
GAPVD1-202ENST00000297933 NPYP01303 97 aa5.36□□□□□ -1.55
GAPVD1-202ENST00000297933 CTSGP08311 255 aa5.36□□□□□ -1.55
GAPVD1-202ENST00000297933 PLA2G2AP14555 144 aa5.36□□□□□ -1.55
GAPVD1-202ENST00000297933 KRTAP27-1Q3LI81 207 aa5.36□□□□□ -1.55
GAPVD1-202ENST00000297933 OCIAD2Q56VL3 154 aa5.36□□□□□ -1.55
GAPVD1-202ENST00000297933 SPATA25Q9BR10 227 aa5.36□□□□□ -1.55
GAPVD1-202ENST00000297933 BOD1L2Q8IYS8 172 aa5.36□□□□□ -1.55
GAPVD1-202ENST00000297933 hADV29S1A0JD25 119 aa5.36□□□□□ -1.55
GAPVD1-202ENST00000297933 NOTCH4Q99466 2003 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms