RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 MYLKQ15746 1914 aa13.25□□□□□ -0.29
CNTNAP3-201ENST00000297668 ELANEP08246 267 aa13.25□□□□□ -0.29
CNTNAP3-201ENST00000297668 FAM120AOSQ5T036 256 aa13.25□□□□□ -0.29
CNTNAP3-201ENST00000297668 ZFHX2Q9C0A1 2572 aaPredicted RBP13.25□□□□□ -0.29
CNTNAP3-201ENST00000297668 HLA-DMBP28068 263 aa13.25□□□□□ -0.29
CNTNAP3-201ENST00000297668 AGPAT4-IT1Q9H0P7 198 aa13.25□□□□□ -0.29
CNTNAP3-201ENST00000297668 PCNX2A6NKB5 2137 aa13.25□□□□□ -0.29
CNTNAP3-201ENST00000297668 DYSFO75923 2080 aa13.25□□□□□ -0.29
CNTNAP3-201ENST00000297668 ZNF747Q9BV97 191 aa13.24□□□□□ -0.29
CNTNAP3-201ENST00000297668 CTSZQ9UBR2 303 aa13.24□□□□□ -0.29
CNTNAP3-201ENST00000297668 DYNAPQ8N1N2 210 aa13.24□□□□□ -0.29
CNTNAP3-201ENST00000297668 WIPF2Q8TF74 440 aaPredicted RBP13.24□□□□□ -0.29
CNTNAP3-201ENST00000297668 SIVA1O15304 175 aa13.23□□□□□ -0.29
CNTNAP3-201ENST00000297668 EGR2P11161 476 aaPredicted RBP13.23□□□□□ -0.29
CNTNAP3-201ENST00000297668 ZNF493Q6ZR52 646 aa13.22□□□□□ -0.29
CNTNAP3-201ENST00000297668 UBL5Q9BZL1 73 aa13.22□□□□□ -0.29
CNTNAP3-201ENST00000297668 TICRRQ7Z2Z1 1910 aa13.22□□□□□ -0.29
CNTNAP3-201ENST00000297668 H3BMG7 143 aa13.22□□□□□ -0.29
CNTNAP3-201ENST00000297668 HERVK_113P63121 156 aa13.22□□□□□ -0.29
CNTNAP3-201ENST00000297668 CDPF1Q6NVV7 123 aa13.22□□□□□ -0.29
CNTNAP3-201ENST00000297668 TRACP01848 142 aa13.22□□□□□ -0.29
CNTNAP3-201ENST00000297668 MRPL53Q96EL3 112 aaKnown RBP13.22□□□□□ -0.29
CNTNAP3-201ENST00000297668 WNK1Q9H4A3 2382 aa13.22□□□□□ -0.29
CNTNAP3-201ENST00000297668 H3BUA1 57 aa13.22□□□□□ -0.29
CNTNAP3-201ENST00000297668 TSC2P49815 1807 aa13.22□□□□□ -0.29
CNTNAP3-201ENST00000297668 F6UB75 175 aa13.21□□□□□ -0.29
CNTNAP3-201ENST00000297668 K7ERJ3 54 aa13.21□□□□□ -0.29
CNTNAP3-201ENST00000297668 NKAPP1Q8N9T2 125 aa13.21□□□□□ -0.29
CNTNAP3-201ENST00000297668 LENEPQ9Y5L5 61 aa13.21□□□□□ -0.29
CNTNAP3-201ENST00000297668 UTF1Q5T230 341 aa13.21□□□□□ -0.29
CNTNAP3-201ENST00000297668 WDR81Q562E7 1941 aa13.21□□□□□ -0.29
CNTNAP3-201ENST00000297668 PRSS29PA6NIE9 313 aa13.21□□□□□ -0.29
CNTNAP3-201ENST00000297668 HERV-K104P63124 156 aa13.21□□□□□ -0.29
CNTNAP3-201ENST00000297668 KLF5Q13887 457 aaPredicted RBP13.21□□□□□ -0.29
CNTNAP3-201ENST00000297668 TMEM126AQ9H061 195 aa13.21□□□□□ -0.3
CNTNAP3-201ENST00000297668 FGF23Q9GZV9 251 aaPredicted RBP13.2□□□□□ -0.3
CNTNAP3-201ENST00000297668 FOXE3Q13461 319 aa13.2□□□□□ -0.3
CNTNAP3-201ENST00000297668 AMTNQ6UX39 209 aa13.2□□□□□ -0.3
CNTNAP3-201ENST00000297668 EML6Q6ZMW3 1958 aa13.2□□□□□ -0.3
CNTNAP3-201ENST00000297668 GNRH2O43555 120 aa13.2□□□□□ -0.3
CNTNAP3-201ENST00000297668 HAMPP81172 84 aa13.2□□□□□ -0.3
CNTNAP3-201ENST00000297668 RPL32P62910 135 aaKnown RBP13.19□□□□□ -0.3
CNTNAP3-201ENST00000297668 RNASE13Q5GAN3 156 aaKnown RBP13.19□□□□□ -0.3
CNTNAP3-201ENST00000297668 COA6Q5JTJ3 125 aaKnown RBP13.19□□□□□ -0.3
CNTNAP3-201ENST00000297668 CARD19Q96LW7 228 aa13.19□□□□□ -0.3
CNTNAP3-201ENST00000297668 TRAV13-2A0A0B4J235 113 aa13.19□□□□□ -0.3
CNTNAP3-201ENST00000297668 SHISA9B4DS77 424 aa13.19□□□□□ -0.3
CNTNAP3-201ENST00000297668 CFHR4Q92496 578 aa13.19□□□□□ -0.3
CNTNAP3-201ENST00000297668 SCRT2Q9NQ03 307 aa13.19□□□□□ -0.3
CNTNAP3-201ENST00000297668 FOXI2Q6ZQN5 318 aa13.19□□□□□ -0.3
CNTNAP3-201ENST00000297668 C12orf74Q32Q52 190 aa13.19□□□□□ -0.3
CNTNAP3-201ENST00000297668 KIR2DL5BA0A0G2JN68 375 aa13.18□□□□□ -0.3
CNTNAP3-201ENST00000297668 KIR2DL5BA0A0G2JPC4 375 aa13.18□□□□□ -0.3
CNTNAP3-201ENST00000297668 K7EMI3 77 aa13.18□□□□□ -0.3
CNTNAP3-201ENST00000297668 APOC4P55056 127 aa13.18□□□□□ -0.3
CNTNAP3-201ENST00000297668 KIR2DL5AQ8N109 375 aa13.18□□□□□ -0.3
CNTNAP3-201ENST00000297668 NLRC5Q86WI3 1866 aa13.18□□□□□ -0.3
CNTNAP3-201ENST00000297668 RBAKDNA6NC62 111 aa13.18□□□□□ -0.3
CNTNAP3-201ENST00000297668 MRAPQ8TCY5 172 aa13.18□□□□□ -0.3
CNTNAP3-201ENST00000297668 RHOHQ15669 191 aa13.18□□□□□ -0.3
CNTNAP3-201ENST00000297668 TNCP24821 2201 aa13.18□□□□□ -0.3
CNTNAP3-201ENST00000297668 PLXNA2O75051 1894 aa13.18□□□□□ -0.3
CNTNAP3-201ENST00000297668 CRLF1O75462 422 aa13.17□□□□□ -0.3
CNTNAP3-201ENST00000297668 HOXB4P17483 251 aaPredicted RBP13.17□□□□□ -0.3
CNTNAP3-201ENST00000297668 RNF138Q8WVD3 245 aa13.17□□□□□ -0.3
CNTNAP3-201ENST00000297668 ANGP03950 147 aaKnown RBP13.17□□□□□ -0.3
CNTNAP3-201ENST00000297668 RBMY1FQ15415 496 aaKnown RBP13.17□□□□□ -0.3
CNTNAP3-201ENST00000297668 PLXND1Q9Y4D7 1925 aa13.17□□□□□ -0.3
CNTNAP3-201ENST00000297668 LHBP01229 141 aa13.17□□□□□ -0.3
CNTNAP3-201ENST00000297668 PIP4P1Q86T03 277 aa13.16□□□□□ -0.3
CNTNAP3-201ENST00000297668 NOTCH4Q99466 2003 aa13.16□□□□□ -0.3
CNTNAP3-201ENST00000297668 PCP2Q8IVA1 136 aa13.16□□□□□ -0.3
CNTNAP3-201ENST00000297668 IGF2BP2-AS1Q96M15 143 aa13.16□□□□□ -0.3
CNTNAP3-201ENST00000297668 TRAV25A0A0B4J276 109 aa13.15□□□□□ -0.3
CNTNAP3-201ENST00000297668 CENPVL3A0A0U1RRI6 287 aa13.15□□□□□ -0.3
CNTNAP3-201ENST00000297668 A0A096LPF7 62 aa13.15□□□□□ -0.3
CNTNAP3-201ENST00000297668 GATA1P15976 413 aaPredicted RBP13.15□□□□□ -0.3
CNTNAP3-201ENST00000297668 SUMO4Q6EEV6 95 aa13.15□□□□□ -0.3
CNTNAP3-201ENST00000297668 Q6ZSR3 168 aa13.15□□□□□ -0.3
CNTNAP3-201ENST00000297668 CHD3Q12873 2000 aaKnown RBP13.15□□□□□ -0.3
CNTNAP3-201ENST00000297668 IGKV1-17P01599 117 aa13.15□□□□□ -0.3
CNTNAP3-201ENST00000297668 GP9P14770 177 aa13.15□□□□□ -0.3
CNTNAP3-201ENST00000297668 HOXD3P31249 432 aaPredicted RBP13.15□□□□□ -0.3
CNTNAP3-201ENST00000297668 SPRNQ5BIV9 151 aa13.15□□□□□ -0.3
CNTNAP3-201ENST00000297668 DEFB112Q30KQ8 113 aa13.14□□□□□ -0.31
CNTNAP3-201ENST00000297668 IGHV4-59P01825 116 aa13.14□□□□□ -0.31
CNTNAP3-201ENST00000297668 CFC1BP0CG36 223 aa13.14□□□□□ -0.31
CNTNAP3-201ENST00000297668 CFC1P0CG37 223 aa13.14□□□□□ -0.31
CNTNAP3-201ENST00000297668 GRNP28799 593 aaKnown RBP13.14□□□□□ -0.31
CNTNAP3-201ENST00000297668 Q6ZVH6 145 aa13.14□□□□□ -0.31
CNTNAP3-201ENST00000297668 LYPD6Q86Y78 171 aa13.14□□□□□ -0.31
CNTNAP3-201ENST00000297668 J3KT08 172 aa13.14□□□□□ -0.31
CNTNAP3-201ENST00000297668 U3KQE9 123 aa13.14□□□□□ -0.31
CNTNAP3-201ENST00000297668 K7EIM0 57 aa13.14□□□□□ -0.31
CNTNAP3-201ENST00000297668 NTN5Q8WTR8 489 aaPredicted RBP13.14□□□□□ -0.31
CNTNAP3-201ENST00000297668 MUC6Q6W4X9 2439 aa13.14□□□□□ -0.31
CNTNAP3-201ENST00000297668 I3L2K1 104 aa13.13□□□□□ -0.31
CNTNAP3-201ENST00000297668 VPREB3Q9UKI3 123 aa13.13□□□□□ -0.31
CNTNAP3-201ENST00000297668 SPRY2O43597 315 aa13.13□□□□□ -0.31
CNTNAP3-201ENST00000297668 ANAPC1Q9H1A4 1944 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms