RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 ZPLD1Q8TCW7 415 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 TIMM17BO60830 172 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 TRBV12-3P01733 135 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 MED14OSP0DP75 135 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 QRFPP83859 136 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 C1orf159Q96HA4 380 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 UCN2Q96RP3 112 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 IGKV3-15P01624 115 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 UPK3BQ9BT76 320 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 CXCL6P80162 114 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 RNF114Q9Y508 228 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 LTBP2Q14767 1821 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 C15orf62A8K5M9 175 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 GATA3P23771 443 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 THAP8Q8NA92 274 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 SMIM9A6NGZ8 99 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 C11orf86A6NJI1 115 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 ZFP36L1Q07352 338 aaKnown RBP3.89□□□□□ -1.79
CSMD3-201ENST00000297405 LYZL4Q96KX0 146 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 DCTN5Q9BTE1 182 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 DEPPQ9NTK1 212 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 SIGLEC9Q9Y336 463 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 CFAP46Q8IYW2 2715 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 IGHV1-69P01742 117 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 CD55P08174 381 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 RPL39P5Q59GN2 51 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 IGHV3-13P01766 116 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 RNF183Q96D59 192 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 NAA38Q9BRA0 125 aaKnown RBP3.89□□□□□ -1.79
CSMD3-201ENST00000297405 ARMS2P0C7Q2 107 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 NDUFA11Q86Y39 141 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 PRR25Q96S07 402 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 IL9P15248 144 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 ZNF134P52741 427 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 PAQR4Q8N4S7 273 aaPredicted RBP3.89□□□□□ -1.79
CSMD3-201ENST00000297405 LIMD2Q9BT23 127 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 TRBV19A0A075B6N1 114 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 C1QL2Q7Z5L3 287 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 KIR2DL5BQ8NHK3 375 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 SPINK14Q6IE38 97 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 SP7Q8TDD2 431 aaPredicted RBP3.89□□□□□ -1.79
CSMD3-201ENST00000297405 SCRT1Q9BWW7 348 aa3.89□□□□□ -1.79
CSMD3-201ENST00000297405 APELAP0DMC3 54 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 WFDC2Q14508 124 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 DMRTC2Q8IXT2 367 aaPredicted RBP3.88□□□□□ -1.79
CSMD3-201ENST00000297405 SMIM14Q96QK8 99 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 IGKV1D-33P01593 117 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 IGKV1-33P01594 117 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 ITLN1Q8WWA0 313 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 IGKV1D-16P01601 117 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 UNQ6494/PRO21346Q6UXR6 183 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 EXOC3-AS1Q8N2X6 119 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 IGKV3OR2-268A0A0C4DH90 116 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 H0Y8X5 98 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 COX7A2LO14548 114 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 C14orf178Q8N769 122 aaPredicted RBP3.88□□□□□ -1.79
CSMD3-201ENST00000297405 HCSTQ9UBK5 93 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 TRAV7A0A075B6U4 112 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 IGKV1-8A0A0C4DH67 115 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 K7ERJ3 54 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 LINC00526Q96FQ7 95 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 USP17L23D6RBM5 183 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 CTRLP40313 264 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 CRYBA2P53672 197 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 SLC25A45Q8N413 288 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 SPRY4Q9C004 299 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 HIST2H2BCQ6DN03 193 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 HIST2H2BDQ6DRA6 164 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 WBP1Q96G27 269 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 TTTY12Q9BZ98 90 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 AMELYQ99218 206 aa3.88□□□□□ -1.79
CSMD3-201ENST00000297405 BCE1O60756 84 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 DSCR9P59020 149 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 TRBV30A0A0K0K1B3 111 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 RS1O15537 224 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 IGKV1-5P01602 117 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 ZNF784Q8NCA9 323 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-201ENST00000297405 PATE1Q8WXA2 126 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 LMO1P25800 156 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 PFN2P35080 140 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 FXYD5Q96DB9 178 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 ESM1Q9NQ30 184 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 IGKV1D-13A0A0B4J2D9 117 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 LOC101059948A0A1B0GTJ6 334 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 C17orf100A8MU93 164 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 IGKV1-13P0DP09 117 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-201ENST00000297405 STPG1Q5TH74 334 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-201ENST00000297405 H7C423 109 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 PEAR1Q5VY43 1037 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-201ENST00000297405 PRSS22Q9GZN4 317 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 IGHV3-21A0A0B4J1V1 117 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 H3BUA1 57 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 FOXS1O43638 330 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 PRSS57Q6UWY2 283 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 C14orf132Q9NPU4 83 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 NDUFA4L2Q9NRX3 87 aa3.87□□□□□ -1.79
CSMD3-201ENST00000297405 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-201ENST00000297405 ODF1Q14990 250 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms