RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 IGLV11-55A0A075B6I3 123 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 FAM231BA6NCW3 169 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 NPYP01303 97 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 IGHV4-59P01825 116 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 C1orf122Q6ZSJ8 110 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 Q6ZVH6 145 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 DAZ1Q9NQZ3 744 aaKnown RBP11.2□□□□□ -0.62
TMEM47-201ENST00000275954 TNFRSF18Q9Y5U5 241 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 PAX1P15863 534 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 AGPAT4-IT1Q9H0P7 198 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 IGHV3-64A0A075B6Q5 118 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 IGKV3D-20A0A0C4DH25 116 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 SMIM13P0DJ93 91 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 LGALS3P17931 250 aaKnown RBP11.2□□□□□ -0.62
TMEM47-201ENST00000275954 PCP4P48539 62 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 PLP1P60201 277 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 GATA1P15976 413 aaPredicted RBP11.19□□□□□ -0.62
TMEM47-201ENST00000275954 RRN3P1Q2M238 152 aa11.19□□□□□ -0.62
TMEM47-201ENST00000275954 USMG5Q96IX5 58 aa11.19□□□□□ -0.62
TMEM47-201ENST00000275954 COL5A1P20908 1838 aaPredicted RBP11.19□□□□□ -0.62
TMEM47-201ENST00000275954 NBEAL1Q6ZS30 2694 aa11.19□□□□□ -0.62
TMEM47-201ENST00000275954 LINC01548A6NM66 108 aa11.19□□□□□ -0.62
TMEM47-201ENST00000275954 DLEU1O43261 78 aa11.19□□□□□ -0.62
TMEM47-201ENST00000275954 AMMECR1LQ6DCA0 310 aa11.19□□□□□ -0.62
TMEM47-201ENST00000275954 BCL6BQ8N143 479 aaPredicted RBP11.19□□□□□ -0.62
TMEM47-201ENST00000275954 LINC00477Q96M19 166 aa11.19□□□□□ -0.62
TMEM47-201ENST00000275954 FANCD2OSQ96PS1 177 aa11.19□□□□□ -0.62
TMEM47-201ENST00000275954 SIGLEC8Q9NYZ4 499 aa11.19□□□□□ -0.62
TMEM47-201ENST00000275954 UTP20O75691 2785 aaKnown RBP11.19□□□□□ -0.62
TMEM47-201ENST00000275954 UNC79Q9P2D8 2635 aa11.19□□□□□ -0.62
TMEM47-201ENST00000275954 IGKCP01834 107 aa11.19□□□□□ -0.62
TMEM47-201ENST00000275954 LAGE3Q14657 143 aa11.19□□□□□ -0.62
TMEM47-201ENST00000275954 TRAV12-2A0A075B6T6 113 aa11.18□□□□□ -0.62
TMEM47-201ENST00000275954 PRAC2D3DTV9 90 aa11.18□□□□□ -0.62
TMEM47-201ENST00000275954 FOXE3Q13461 319 aa11.18□□□□□ -0.62
TMEM47-201ENST00000275954 OR2K2Q8NGT1 345 aa11.18□□□□□ -0.62
TMEM47-201ENST00000275954 YPEL4Q96NS1 127 aa11.18□□□□□ -0.62
TMEM47-201ENST00000275954 FAM223BA6NKX1 122 aa11.18□□□□□ -0.62
TMEM47-201ENST00000275954 FAM223AQ8IWN6 122 aa11.18□□□□□ -0.62
TMEM47-201ENST00000275954 COL6A5A8TX70 2615 aa11.18□□□□□ -0.62
TMEM47-201ENST00000275954 SPINK13Q1W4C9 94 aa11.18□□□□□ -0.62
TMEM47-201ENST00000275954 IGLV2-8P01709 118 aa11.17□□□□□ -0.62
TMEM47-201ENST00000275954 CRYGCP07315 174 aa11.17□□□□□ -0.62
TMEM47-201ENST00000275954 ZNF124Q15973 351 aa11.17□□□□□ -0.62
TMEM47-201ENST00000275954 NEGR1Q7Z3B1 354 aa11.17□□□□□ -0.62
TMEM47-201ENST00000275954 HOXA3O43365 443 aaPredicted RBP11.17□□□□□ -0.62
TMEM47-201ENST00000275954 SLC25A16P16260 332 aa11.17□□□□□ -0.62
TMEM47-201ENST00000275954 ITPR1Q14643 2758 aa11.17□□□□□ -0.62
TMEM47-201ENST00000275954 DEFB112Q30KQ8 113 aa11.17□□□□□ -0.62
TMEM47-201ENST00000275954 CYSLTR1Q9Y271 337 aa11.17□□□□□ -0.62
TMEM47-201ENST00000275954 KNCNA6PVL3 124 aa11.17□□□□□ -0.62
TMEM47-201ENST00000275954 C1orf159Q96HA4 380 aa11.17□□□□□ -0.62
TMEM47-201ENST00000275954 GEMIN7Q9H840 131 aaKnown RBP11.17□□□□□ -0.62
TMEM47-201ENST00000275954 PLA2G2AP14555 144 aa11.16□□□□□ -0.62
TMEM47-201ENST00000275954 SPCS1Q9Y6A9 102 aa11.16□□□□□ -0.62
TMEM47-201ENST00000275954 TEX43Q6ZNM6 134 aa11.16□□□□□ -0.62
TMEM47-201ENST00000275954 NPBQ8NG41 125 aa11.16□□□□□ -0.62
TMEM47-201ENST00000275954 CSTL1Q9H114 145 aa11.16□□□□□ -0.62
TMEM47-201ENST00000275954 PPP1R17O96001 155 aa11.16□□□□□ -0.62
TMEM47-201ENST00000275954 ORAOV1Q8WV07 137 aa11.16□□□□□ -0.62
TMEM47-201ENST00000275954 FBXL19-AS1Q494R0 122 aa11.15□□□□□ -0.62
TMEM47-201ENST00000275954 TMEM238LA0A1B0GVL6 79 aa11.15□□□□□ -0.62
TMEM47-201ENST00000275954 A6NJY4 79 aa11.15□□□□□ -0.62
TMEM47-201ENST00000275954 ANXA2RQ3ZCQ2 193 aa11.15□□□□□ -0.62
TMEM47-201ENST00000275954 ORMDL2Q53FV1 153 aa11.15□□□□□ -0.62
TMEM47-201ENST00000275954 DTX2Q86UW9 622 aa11.15□□□□□ -0.62
TMEM47-201ENST00000275954 MS4A6AQ9H2W1 248 aa11.15□□□□□ -0.62
TMEM47-201ENST00000275954 DPH3P1Q9H4G8 78 aa11.15□□□□□ -0.62
TMEM47-201ENST00000275954 KLK9Q9UKQ9 250 aa11.15□□□□□ -0.62
TMEM47-201ENST00000275954 DEFB131AP59861 70 aa11.15□□□□□ -0.62
TMEM47-201ENST00000275954 UBE2E2Q96LR5 201 aa11.15□□□□□ -0.62
TMEM47-201ENST00000275954 CHTOPQ9Y3Y2 248 aaKnown RBP11.15□□□□□ -0.62
TMEM47-201ENST00000275954 INS-IGF2F8WCM5 200 aa11.14□□□□□ -0.63
TMEM47-201ENST00000275954 ZNF876PQ49A33 203 aa11.14□□□□□ -0.63
TMEM47-201ENST00000275954 MRPL16Q9NX20 251 aaKnown RBP11.14□□□□□ -0.63
TMEM47-201ENST00000275954 NDUFS8O00217 210 aa11.14□□□□□ -0.63
TMEM47-201ENST00000275954 KLHL30-AS1Q8NEE0 82 aa11.14□□□□□ -0.63
TMEM47-201ENST00000275954 A0A0U1RRA0 63 aa11.14□□□□□ -0.63
TMEM47-201ENST00000275954 BUB3O43684 328 aa11.14□□□□□ -0.63
TMEM47-201ENST00000275954 DSCR9P59020 149 aa11.14□□□□□ -0.63
TMEM47-201ENST00000275954 CFHR4Q92496 578 aa11.14□□□□□ -0.63
TMEM47-201ENST00000275954 NPSP0C0P6 89 aa11.13□□□□□ -0.63
TMEM47-201ENST00000275954 VCX2Q9H322 139 aa11.13□□□□□ -0.63
TMEM47-201ENST00000275954 UBR5O95071 2799 aaPredicted RBP11.13□□□□□ -0.63
TMEM47-201ENST00000275954 SUMO2P61956 95 aaKnown RBP11.13□□□□□ -0.63
TMEM47-201ENST00000275954 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
TMEM47-201ENST00000275954 ZNF815PA8K554 130 aa11.13□□□□□ -0.63
TMEM47-201ENST00000275954 H7C1H1 209 aa11.13□□□□□ -0.63
TMEM47-201ENST00000275954 DUSP14O95147 198 aaKnown RBP11.13□□□□□ -0.63
TMEM47-201ENST00000275954 GDF5OSQ5U4N7 250 aa11.13□□□□□ -0.63
TMEM47-201ENST00000275954 C10orf105Q8TEF2 133 aa11.13□□□□□ -0.63
TMEM47-201ENST00000275954 KLF12Q9Y4X4 402 aa11.13□□□□□ -0.63
TMEM47-201ENST00000275954 RIPPLY3P57055 190 aa11.12□□□□□ -0.63
TMEM47-201ENST00000275954 LYRM7Q5U5X0 104 aa11.12□□□□□ -0.63
TMEM47-201ENST00000275954 WIPF2Q8TF74 440 aaPredicted RBP11.12□□□□□ -0.63
TMEM47-201ENST00000275954 PEMTQ9UBM1 199 aa11.12□□□□□ -0.63
TMEM47-201ENST00000275954 GNRH2O43555 120 aa11.12□□□□□ -0.63
TMEM47-201ENST00000275954 STHQ8IWL8 128 aa11.12□□□□□ -0.63
TMEM47-201ENST00000275954 IGHV3-53P01767 116 aa11.12□□□□□ -0.63
TMEM47-201ENST00000275954 TRGV2A0A075B6R0 118 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms