RNA–Protein interactions for RNA: ENST00000273482.10

TRPC1-201, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPC1, Length 4,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-201ENST00000273482 PRRC2AP48634 2157 aaKnown RBP13.43□□□□□ -0.26
TRPC1-201ENST00000273482 TRBV25-1A0A075B6N4 114 aa13.43□□□□□ -0.26
TRPC1-201ENST00000273482 TRAV26-2A0A0B4J265 109 aa13.43□□□□□ -0.26
TRPC1-201ENST00000273482 EGR2P11161 476 aaPredicted RBP13.43□□□□□ -0.26
TRPC1-201ENST00000273482 VCANP13611 3396 aa13.43□□□□□ -0.26
TRPC1-201ENST00000273482 SPATA12Q7Z6I5 190 aa13.43□□□□□ -0.26
TRPC1-201ENST00000273482 SH2D6Q7Z4S9 175 aa13.43□□□□□ -0.26
TRPC1-201ENST00000273482 VPS13AQ96RL7 3174 aa13.42□□□□□ -0.26
TRPC1-201ENST00000273482 IGKV1-17P01599 117 aa13.42□□□□□ -0.26
TRPC1-201ENST00000273482 CR1LQ2VPA4 569 aa13.42□□□□□ -0.26
TRPC1-201ENST00000273482 IL17RELQ6ZVW7 336 aa13.42□□□□□ -0.26
TRPC1-201ENST00000273482 ATP6V0BQ99437 205 aa13.42□□□□□ -0.26
TRPC1-201ENST00000273482 C19orf71A6NCJ1 209 aa13.42□□□□□ -0.26
TRPC1-201ENST00000273482 FXYD2P54710 66 aa13.42□□□□□ -0.26
TRPC1-201ENST00000273482 C12orf74Q32Q52 190 aa13.42□□□□□ -0.26
TRPC1-201ENST00000273482 BOD1L2Q8IYS8 172 aa13.42□□□□□ -0.26
TRPC1-201ENST00000273482 PAX8Q06710 450 aa13.42□□□□□ -0.26
TRPC1-201ENST00000273482 C1orf229Q6ZS94 237 aaPredicted RBP13.42□□□□□ -0.26
TRPC1-201ENST00000273482 MRAP2Q96G30 205 aa13.42□□□□□ -0.26
TRPC1-201ENST00000273482 FN1P02751 2386 aaKnown RBP13.42□□□□□ -0.26
TRPC1-201ENST00000273482 ATP6V0E1O15342 81 aa13.41□□□□□ -0.26
TRPC1-201ENST00000273482 TANC2Q9HCD6 1990 aa13.41□□□□□ -0.26
TRPC1-201ENST00000273482 RITA1Q96K30 269 aa13.41□□□□□ -0.26
TRPC1-201ENST00000273482 WFDC12Q8WWY7 111 aa13.41□□□□□ -0.26
TRPC1-201ENST00000273482 IGHV4-61A0A0C4DH41 118 aa13.4□□□□□ -0.26
TRPC1-201ENST00000273482 GATA1P15976 413 aaPredicted RBP13.4□□□□□ -0.26
TRPC1-201ENST00000273482 SLC25A16P16260 332 aa13.4□□□□□ -0.26
TRPC1-201ENST00000273482 C2orf66Q6UXQ4 117 aa13.4□□□□□ -0.26
TRPC1-201ENST00000273482 DSCAML1Q8TD84 2053 aa13.4□□□□□ -0.26
TRPC1-201ENST00000273482 F8VRH5 84 aa13.4□□□□□ -0.26
TRPC1-201ENST00000273482 TSPAN13O95857 204 aa13.4□□□□□ -0.26
TRPC1-201ENST00000273482 RAX2Q96IS3 184 aa13.4□□□□□ -0.26
TRPC1-201ENST00000273482 MSRB1Q9NZV6 116 aa13.4□□□□□ -0.26
TRPC1-201ENST00000273482 K7EMI3 77 aa13.4□□□□□ -0.26
TRPC1-201ENST00000273482 HLA-DMBP28068 263 aa13.4□□□□□ -0.26
TRPC1-201ENST00000273482 IGHV1-69DA0A0B4J2H0 117 aa13.4□□□□□ -0.27
TRPC1-201ENST00000273482 IGHV1-69P01742 117 aa13.4□□□□□ -0.27
TRPC1-201ENST00000273482 SNRPD3P62318 126 aaKnown RBP13.4□□□□□ -0.27
TRPC1-201ENST00000273482 MEIG1Q5JSS6 88 aa13.4□□□□□ -0.27
TRPC1-201ENST00000273482 LAMA1P25391 3075 aa13.39□□□□□ -0.27
TRPC1-201ENST00000273482 MYMXA0A1B0GTQ4 84 aa13.39□□□□□ -0.27
TRPC1-201ENST00000273482 SUMO2P61956 95 aaKnown RBP13.39□□□□□ -0.27
TRPC1-201ENST00000273482 LINC01356Q8N9X3 169 aa13.39□□□□□ -0.27
TRPC1-201ENST00000273482 IGKV1D-37A0A075B6S9 117 aa13.39□□□□□ -0.27
TRPC1-201ENST00000273482 Q8N976 141 aa13.39□□□□□ -0.27
TRPC1-201ENST00000273482 OVOL1O14753 267 aa13.39□□□□□ -0.27
TRPC1-201ENST00000273482 FBXL19-AS1Q494R0 122 aa13.39□□□□□ -0.27
TRPC1-201ENST00000273482 PRADC1Q9BSG0 188 aa13.39□□□□□ -0.27
TRPC1-201ENST00000273482 CGB3P0DN86 165 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 CGB7P0DN87 165 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 Q96MF0 132 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 MGAQ8IWI9 3026 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 C9JAW5 83 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 LOXL1Q08397 574 aaPredicted RBP13.38□□□□□ -0.27
TRPC1-201ENST00000273482 WFDC2Q14508 124 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 TAL2Q16559 108 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 TNFRSF18Q9Y5U5 241 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 ACANP16112 2415 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 G3V4G9 280 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 C19orf84I3L1E1 186 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 C9orf139Q6ZV77 190 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 MLST8Q9BVC4 326 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 CPAMD8Q8IZJ3 1885 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 C10orf126Q8N4M7 172 aa13.38□□□□□ -0.27
TRPC1-201ENST00000273482 IGHV4-30-2A0A087WSY4 118 aa13.37□□□□□ -0.27
TRPC1-201ENST00000273482 CRXO43186 299 aaPredicted RBP13.37□□□□□ -0.27
TRPC1-201ENST00000273482 CENPEQ02224 2701 aa13.37□□□□□ -0.27
TRPC1-201ENST00000273482 TRAV8-4A0A0B4J246 113 aa13.36□□□□□ -0.27
TRPC1-201ENST00000273482 IGLL5B9A064 214 aa13.36□□□□□ -0.27
TRPC1-201ENST00000273482 INS-IGF2F8WCM5 200 aa13.36□□□□□ -0.27
TRPC1-201ENST00000273482 SMIM2Q9BVW6 85 aa13.36□□□□□ -0.27
TRPC1-201ENST00000273482 J3QKU1 62 aa13.36□□□□□ -0.27
TRPC1-201ENST00000273482 FLNBO75369 2602 aaKnown RBP13.36□□□□□ -0.27
TRPC1-201ENST00000273482 LINC00477Q96M19 166 aa13.36□□□□□ -0.27
TRPC1-201ENST00000273482 PRORYQ9H606 182 aa13.36□□□□□ -0.27
TRPC1-201ENST00000273482 VCYO14598 125 aa13.35□□□□□ -0.27
TRPC1-201ENST00000273482 PPDPFLQ8WWR9 84 aa13.35□□□□□ -0.27
TRPC1-201ENST00000273482 RRN3P1Q2M238 152 aa13.35□□□□□ -0.27
TRPC1-201ENST00000273482 A0A087WX48 190 aa13.35□□□□□ -0.27
TRPC1-201ENST00000273482 I3L2K1 104 aa13.35□□□□□ -0.27
TRPC1-201ENST00000273482 CDSNQ15517 529 aa13.35□□□□□ -0.27
TRPC1-201ENST00000273482 FOXI2Q6ZQN5 318 aa13.35□□□□□ -0.27
TRPC1-201ENST00000273482 K7EIM0 57 aa13.34□□□□□ -0.27
TRPC1-201ENST00000273482 HLA-DRB4P13762 266 aa13.34□□□□□ -0.27
TRPC1-201ENST00000273482 HLA-DRB4X5D2U9 266 aa13.34□□□□□ -0.27
TRPC1-201ENST00000273482 PF4P02776 101 aa13.34□□□□□ -0.27
TRPC1-201ENST00000273482 ZFP36P26651 326 aaKnown RBP13.34□□□□□ -0.27
TRPC1-201ENST00000273482 C19orf54Q5BKX5 351 aa13.34□□□□□ -0.27
TRPC1-201ENST00000273482 C1orf159Q96HA4 380 aa13.34□□□□□ -0.27
TRPC1-201ENST00000273482 C8orf31Q8N9H6 132 aa13.34□□□□□ -0.27
TRPC1-201ENST00000273482 DYNAPQ8N1N2 210 aa13.33□□□□□ -0.27
TRPC1-201ENST00000273482 COL6A3P12111 3177 aa13.33□□□□□ -0.27
TRPC1-201ENST00000273482 ZNF292O60281 2723 aa13.33□□□□□ -0.28
TRPC1-201ENST00000273482 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.33□□□□□ -0.28
TRPC1-201ENST00000273482 C1orf122Q6ZSJ8 110 aa13.33□□□□□ -0.28
TRPC1-201ENST00000273482 EXPH5Q8NEV8 1989 aa13.33□□□□□ -0.28
TRPC1-201ENST00000273482 A0A087WWL8 130 aa13.33□□□□□ -0.28
TRPC1-201ENST00000273482 IGLV2-23P01705 113 aa13.33□□□□□ -0.28
TRPC1-201ENST00000273482 DOPEY1Q5JWR5 2465 aa13.33□□□□□ -0.28
TRPC1-201ENST00000273482 TRBV20-1A0A075B6N2 111 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms