RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 TEX36Q5VZQ5 186 aa13.47□□□□□ -0.25
SRF-201ENST00000265354 PTH2Q96A98 100 aa13.47□□□□□ -0.25
SRF-201ENST00000265354 C1orf43Q9BWL3 253 aa13.47□□□□□ -0.25
SRF-201ENST00000265354 A0A1B0GXF2 115 aa13.47□□□□□ -0.25
SRF-201ENST00000265354 SEM1Q6ZVN7 128 aa13.47□□□□□ -0.25
SRF-201ENST00000265354 SLC25A16P16260 332 aa13.47□□□□□ -0.25
SRF-201ENST00000265354 RUSC1-AS1Q66K80 236 aa13.47□□□□□ -0.25
SRF-201ENST00000265354 SIGLEC15Q6ZMC9 328 aa13.47□□□□□ -0.25
SRF-201ENST00000265354 C10orf142B7Z368 130 aa13.46□□□□□ -0.25
SRF-201ENST00000265354 RS1O15537 224 aa13.46□□□□□ -0.25
SRF-201ENST00000265354 LYPD1Q8N2G4 141 aa13.46□□□□□ -0.25
SRF-201ENST00000265354 NCKAP5O14513 1909 aa13.46□□□□□ -0.25
SRF-201ENST00000265354 CGB3P0DN86 165 aa13.46□□□□□ -0.26
SRF-201ENST00000265354 CGB7P0DN87 165 aa13.46□□□□□ -0.26
SRF-201ENST00000265354 MT-ATP8P03928 68 aa13.45□□□□□ -0.26
SRF-201ENST00000265354 C2orf82Q6UX34 121 aa13.45□□□□□ -0.26
SRF-201ENST00000265354 VMO1Q7Z5L0 202 aa13.45□□□□□ -0.26
SRF-201ENST00000265354 IGHV3-73A0A0B4J1V6 119 aa13.45□□□□□ -0.26
SRF-201ENST00000265354 DYNAPQ8N1N2 210 aa13.45□□□□□ -0.26
SRF-201ENST00000265354 ERG28Q9UKR5 140 aa13.45□□□□□ -0.26
SRF-201ENST00000265354 IGKV3OR2-268A0A0C4DH90 116 aa13.44□□□□□ -0.26
SRF-201ENST00000265354 CEACAM4O75871 244 aa13.44□□□□□ -0.26
SRF-201ENST00000265354 C19orf71A6NCJ1 209 aa13.44□□□□□ -0.26
SRF-201ENST00000265354 H3BRN7 92 aa13.44□□□□□ -0.26
SRF-201ENST00000265354 ZNF562Q6V9R5 426 aa13.44□□□□□ -0.26
SRF-201ENST00000265354 HLA-DRB4P13762 266 aa13.44□□□□□ -0.26
SRF-201ENST00000265354 CITED2Q99967 270 aaPredicted RBP13.44□□□□□ -0.26
SRF-201ENST00000265354 HLA-DRB4X5D2U9 266 aa13.44□□□□□ -0.26
SRF-201ENST00000265354 H7C1H1 209 aa13.44□□□□□ -0.26
SRF-201ENST00000265354 BRD3OSQ6XYD6 125 aa13.44□□□□□ -0.26
SRF-201ENST00000265354 DEFB1P60022 68 aa13.43□□□□□ -0.26
SRF-201ENST00000265354 C15orf53Q8NAA6 179 aa13.43□□□□□ -0.26
SRF-201ENST00000265354 ORMDL2Q53FV1 153 aa13.43□□□□□ -0.26
SRF-201ENST00000265354 SMPXQ9UHP9 88 aa13.43□□□□□ -0.26
SRF-201ENST00000265354 K7EIM0 57 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 SLC50A1Q9BRV3 221 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 MLST8Q9BVC4 326 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 LRP4O75096 1905 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 PRAC2D3DTV9 90 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 PMVKQ15126 192 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 C12orf74Q32Q52 190 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 URB1-AS1Q96HZ7 61 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 SPRY4Q9C004 299 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 MAP1AP78559 2803 aaPredicted RBP13.42□□□□□ -0.26
SRF-201ENST00000265354 ZNF688P0C7X2 276 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 FOXE3Q13461 319 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 C2orf66Q6UXQ4 117 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 Q6ZS92 163 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 KLHL30-AS1Q8NEE0 82 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 PRSS22Q9GZN4 317 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 HIVEP3Q5T1R4 2406 aa13.42□□□□□ -0.26
SRF-201ENST00000265354 IGLV2-23P01705 113 aa13.41□□□□□ -0.26
SRF-201ENST00000265354 CEND1Q8N111 149 aa13.41□□□□□ -0.26
SRF-201ENST00000265354 LINC00477Q96M19 166 aa13.41□□□□□ -0.26
SRF-201ENST00000265354 MGAQ8IWI9 3026 aa13.41□□□□□ -0.26
SRF-201ENST00000265354 COL6A3P12111 3177 aa13.41□□□□□ -0.26
SRF-201ENST00000265354 PRADC1Q9BSG0 188 aa13.41□□□□□ -0.26
SRF-201ENST00000265354 TET2Q6N021 2002 aaPredicted RBP13.41□□□□□ -0.26
SRF-201ENST00000265354 PAX8Q06710 450 aa13.4□□□□□ -0.26
SRF-201ENST00000265354 NTN5Q8WTR8 489 aaPredicted RBP13.4□□□□□ -0.26
SRF-201ENST00000265354 TMEM14CQ9P0S9 112 aa13.4□□□□□ -0.26
SRF-201ENST00000265354 TRAV21A0A0B4J279 112 aa13.4□□□□□ -0.26
SRF-201ENST00000265354 CFHR4Q92496 578 aa13.4□□□□□ -0.26
SRF-201ENST00000265354 PLNP26678 52 aa13.4□□□□□ -0.26
SRF-201ENST00000265354 PDE6HQ13956 83 aa13.4□□□□□ -0.26
SRF-201ENST00000265354 SPTBN4Q9H254 2564 aa13.4□□□□□ -0.26
SRF-201ENST00000265354 F6UB75 175 aa13.4□□□□□ -0.26
SRF-201ENST00000265354 I3L2K1 104 aa13.4□□□□□ -0.26
SRF-201ENST00000265354 PSMG4Q5JS54 123 aa13.4□□□□□ -0.26
SRF-201ENST00000265354 FCN3O75636 299 aa13.39□□□□□ -0.27
SRF-201ENST00000265354 ID1P41134 155 aa13.39□□□□□ -0.27
SRF-201ENST00000265354 GAGE2AQ6NT46 116 aa13.39□□□□□ -0.27
SRF-201ENST00000265354 IGKV2D-26A0A0A0MRZ7 120 aa13.39□□□□□ -0.27
SRF-201ENST00000265354 IGLL5B9A064 214 aa13.39□□□□□ -0.27
SRF-201ENST00000265354 GRNP28799 593 aaKnown RBP13.39□□□□□ -0.27
SRF-201ENST00000265354 SHISA2Q6UWI4 295 aa13.39□□□□□ -0.27
SRF-201ENST00000265354 FOXI2Q6ZQN5 318 aa13.39□□□□□ -0.27
SRF-201ENST00000265354 AGPAT4-IT1Q9H0P7 198 aa13.39□□□□□ -0.27
SRF-201ENST00000265354 TRAV8-3A0A0A6YYJ7 113 aa13.38□□□□□ -0.27
SRF-201ENST00000265354 ATP6V0E1O15342 81 aa13.38□□□□□ -0.27
SRF-201ENST00000265354 DNAL4O96015 105 aa13.38□□□□□ -0.27
SRF-201ENST00000265354 ZNF80P51504 273 aaPredicted RBP13.38□□□□□ -0.27
SRF-201ENST00000265354 CR1LQ2VPA4 569 aa13.38□□□□□ -0.27
SRF-201ENST00000265354 SUMO2P61956 95 aaKnown RBP13.38□□□□□ -0.27
SRF-201ENST00000265354 Q8N8P6 123 aa13.37□□□□□ -0.27
SRF-201ENST00000265354 LINC00311Q8N616 119 aa13.37□□□□□ -0.27
SRF-201ENST00000265354 CRIP1P50238 77 aa13.37□□□□□ -0.27
SRF-201ENST00000265354 HIST1H4AP62805 103 aaKnown RBP13.37□□□□□ -0.27
SRF-201ENST00000265354 TMEM101Q96IK0 257 aa13.37□□□□□ -0.27
SRF-201ENST00000265354 ADARB2-AS1A8MUL3 147 aa13.36□□□□□ -0.27
SRF-201ENST00000265354 FOXI1Q12951 378 aa13.36□□□□□ -0.27
SRF-201ENST00000265354 GAS8-AS1O95177 125 aa13.36□□□□□ -0.27
SRF-201ENST00000265354 SPXQ9BT56 116 aa13.36□□□□□ -0.27
SRF-201ENST00000265354 TP53TG1Q9Y2A0 90 aa13.36□□□□□ -0.27
SRF-201ENST00000265354 AGRNO00468 2067 aa13.36□□□□□ -0.27
SRF-201ENST00000265354 NAV2Q8IVL1 2488 aa13.35□□□□□ -0.27
SRF-201ENST00000265354 TEX22C9J3V5 150 aa13.35□□□□□ -0.27
SRF-201ENST00000265354 RPL39LQ96EH5 51 aaKnown RBP13.35□□□□□ -0.27
SRF-201ENST00000265354 SLC25A20O43772 301 aa13.35□□□□□ -0.27
SRF-201ENST00000265354 C2orf91Q6ZV80 131 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms