RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 ZNF479Q96JC4 524 aa13.77□□□□□ -0.21
TRAF4-201ENST00000262395 C8orf86Q6ZUL3 223 aa13.76□□□□□ -0.21
TRAF4-201ENST00000262395 CKS1BP61024 79 aa13.76□□□□□ -0.21
TRAF4-201ENST00000262395 SRSF2Q01130 221 aaKnown RBP13.76□□□□□ -0.21
TRAF4-201ENST00000262395 MUC6Q6W4X9 2439 aa13.76□□□□□ -0.21
TRAF4-201ENST00000262395 COL12A1Q99715 3063 aa13.75□□□□□ -0.21
TRAF4-201ENST00000262395 C12orf74Q32Q52 190 aa13.75□□□□□ -0.21
TRAF4-201ENST00000262395 SFTA2Q6UW10 78 aa13.75□□□□□ -0.21
TRAF4-201ENST00000262395 TM2D2Q9BX73 214 aa13.75□□□□□ -0.21
TRAF4-201ENST00000262395 IGF2RP11717 2491 aa13.75□□□□□ -0.21
TRAF4-201ENST00000262395 HIF1ANQ9NWT6 349 aa13.75□□□□□ -0.21
TRAF4-201ENST00000262395 A0A087WX48 190 aa13.74□□□□□ -0.21
TRAF4-201ENST00000262395 SMPXQ9UHP9 88 aa13.74□□□□□ -0.21
TRAF4-201ENST00000262395 SCGB2A2Q13296 93 aa13.74□□□□□ -0.21
TRAF4-201ENST00000262395 IGKV3-7A0A075B6H7 116 aa13.74□□□□□ -0.21
TRAF4-201ENST00000262395 TRAV26-1A0A087WT03 109 aa13.74□□□□□ -0.21
TRAF4-201ENST00000262395 RPL39LQ96EH5 51 aaKnown RBP13.74□□□□□ -0.21
TRAF4-201ENST00000262395 CYSLTR1Q9Y271 337 aa13.74□□□□□ -0.21
TRAF4-201ENST00000262395 E9PLD3 99 aa13.73□□□□□ -0.21
TRAF4-201ENST00000262395 SCGB1A1P11684 91 aa13.73□□□□□ -0.21
TRAF4-201ENST00000262395 ATP5G2Q06055 141 aa13.73□□□□□ -0.21
TRAF4-201ENST00000262395 J3QR89 54 aa13.73□□□□□ -0.21
TRAF4-201ENST00000262395 SRSF1Q07955 248 aaKnown RBP eCLIP13.73□□□□□ -0.211e-7■■■■□ 23.8
TRAF4-201ENST00000262395 FAM110DQ8TAY7 271 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-201ENST00000262395 C16orf92Q96LL3 132 aa13.73□□□□□ -0.21
TRAF4-201ENST00000262395 SLC50A1Q9BRV3 221 aa13.73□□□□□ -0.21
TRAF4-201ENST00000262395 FOXI2Q6ZQN5 318 aa13.72□□□□□ -0.21
TRAF4-201ENST00000262395 TMEM219Q86XT9 240 aa13.72□□□□□ -0.21
TRAF4-201ENST00000262395 C14orf178Q8N769 122 aaPredicted RBP13.72□□□□□ -0.21
TRAF4-201ENST00000262395 SPTAN1Q13813 2472 aaKnown RBP13.71□□□□□ -0.21
TRAF4-201ENST00000262395 IGHV3OR16-10A0A075B7F0 116 aa13.71□□□□□ -0.21
TRAF4-201ENST00000262395 GLMPQ8WWB7 406 aa13.71□□□□□ -0.21
TRAF4-201ENST00000262395 SCGB3A1Q96QR1 104 aa13.71□□□□□ -0.21
TRAF4-201ENST00000262395 METTL26Q96S19 204 aa13.71□□□□□ -0.21
TRAF4-201ENST00000262395 SPAG8Q99932 426 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-201ENST00000262395 SPANXB1Q9NS25 103 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-201ENST00000262395 RBAKDNA6NC62 111 aa13.71□□□□□ -0.21
TRAF4-201ENST00000262395 MGPP08493 103 aa13.71□□□□□ -0.21
TRAF4-201ENST00000262395 INSL3P51460 131 aa13.71□□□□□ -0.21
TRAF4-201ENST00000262395 C20orf173Q96LM9 149 aa13.71□□□□□ -0.21
TRAF4-201ENST00000262395 FOXC1Q12948 553 aa13.7□□□□□ -0.22
TRAF4-201ENST00000262395 EBI3Q14213 229 aa13.7□□□□□ -0.22
TRAF4-201ENST00000262395 SMIM2Q9BVW6 85 aa13.7□□□□□ -0.22
TRAF4-201ENST00000262395 SAA4P35542 130 aa13.7□□□□□ -0.22
TRAF4-201ENST00000262395 CRYBA4P53673 196 aa13.7□□□□□ -0.22
TRAF4-201ENST00000262395 EMP1P54849 157 aa13.69□□□□□ -0.22
TRAF4-201ENST00000262395 VPS13CQ709C8 3753 aa13.69□□□□□ -0.22
TRAF4-201ENST00000262395 OR11H12B2RN74 326 aa13.69□□□□□ -0.22
TRAF4-201ENST00000262395 S100A4P26447 101 aaKnown RBP13.69□□□□□ -0.22
TRAF4-201ENST00000262395 OR11H1Q8NG94 326 aa13.69□□□□□ -0.22
TRAF4-201ENST00000262395 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
TRAF4-201ENST00000262395 TMEM238LA0A1B0GVL6 79 aa13.68□□□□□ -0.22
TRAF4-201ENST00000262395 H7C1H1 209 aa13.68□□□□□ -0.22
TRAF4-201ENST00000262395 TCF15Q12870 199 aa13.68□□□□□ -0.22
TRAF4-201ENST00000262395 F6UB75 175 aa13.68□□□□□ -0.22
TRAF4-201ENST00000262395 F8VRH5 84 aa13.68□□□□□ -0.22
TRAF4-201ENST00000262395 PLNP26678 52 aa13.68□□□□□ -0.22
TRAF4-201ENST00000262395 RASL10AQ92737 203 aa13.68□□□□□ -0.22
TRAF4-201ENST00000262395 RPL11P62913 178 aaKnown RBP13.67□□□□□ -0.22
TRAF4-201ENST00000262395 MINOS1Q5TGZ0 78 aa13.67□□□□□ -0.22
TRAF4-201ENST00000262395 MINOS1-NBL1R4GNA1 71 aa13.67□□□□□ -0.22
TRAF4-201ENST00000262395 PSMG4Q5JS54 123 aa13.67□□□□□ -0.22
TRAF4-201ENST00000262395 EEF1AKMT3Q96AZ1 226 aa13.67□□□□□ -0.22
TRAF4-201ENST00000262395 SIRPDQ9H106 197 aa13.67□□□□□ -0.22
TRAF4-201ENST00000262395 MYMXA0A1B0GTQ4 84 aa13.67□□□□□ -0.22
TRAF4-201ENST00000262395 AJUBAQ96IF1 538 aa13.67□□□□□ -0.22
TRAF4-201ENST00000262395 TRBV7-3A0A075B6L6 115 aa13.66□□□□□ -0.22
TRAF4-201ENST00000262395 A0A1W2PPR1 153 aa13.66□□□□□ -0.22
TRAF4-201ENST00000262395 F8W1H4 67 aa13.66□□□□□ -0.22
TRAF4-201ENST00000262395 TRBV12-3P01733 135 aa13.66□□□□□ -0.22
TRAF4-201ENST00000262395 SUMO2P61956 95 aaKnown RBP13.66□□□□□ -0.22
TRAF4-201ENST00000262395 C9orf47Q6ZRZ4 202 aa13.66□□□□□ -0.22
TRAF4-201ENST00000262395 GNRH2O43555 120 aa13.66□□□□□ -0.22
TRAF4-201ENST00000262395 RRN3P1Q2M238 152 aa13.66□□□□□ -0.22
TRAF4-201ENST00000262395 GAGE13Q4V321 117 aa13.66□□□□□ -0.22
TRAF4-201ENST00000262395 KLHL30-AS1Q8NEE0 82 aa13.66□□□□□ -0.22
TRAF4-201ENST00000262395 C11orf71Q6IPW1 123 aa13.65□□□□□ -0.22
TRAF4-201ENST00000262395 UNQ9165/PRO28630Q6UXU0 137 aa13.65□□□□□ -0.22
TRAF4-201ENST00000262395 RAXQ9Y2V3 346 aa13.65□□□□□ -0.22
TRAF4-201ENST00000262395 LGALS1P09382 135 aaKnown RBP13.65□□□□□ -0.22
TRAF4-201ENST00000262395 PLEKHB2Q96CS7 222 aa13.65□□□□□ -0.22
TRAF4-201ENST00000262395 SPATA25Q9BR10 227 aa13.65□□□□□ -0.22
TRAF4-201ENST00000262395 GEMIN7Q9H840 131 aaKnown RBP13.65□□□□□ -0.22
TRAF4-201ENST00000262395 OOSP1A8MZH6 123 aa13.64□□□□□ -0.23
TRAF4-201ENST00000262395 RNASE4P34096 147 aaKnown RBP13.64□□□□□ -0.23
TRAF4-201ENST00000262395 ADORA2A-AS1P86434 159 aa13.64□□□□□ -0.23
TRAF4-201ENST00000262395 C2orf66Q6UXQ4 117 aa13.64□□□□□ -0.23
TRAF4-201ENST00000262395 PRADC1Q9BSG0 188 aa13.64□□□□□ -0.23
TRAF4-201ENST00000262395 PHLDA3Q9Y5J5 127 aa13.64□□□□□ -0.23
TRAF4-201ENST00000262395 C20orf78Q9BR46 151 aa13.64□□□□□ -0.23
TRAF4-201ENST00000262395 PGPEP1Q9NXJ5 209 aa13.64□□□□□ -0.23
TRAF4-201ENST00000262395 HLA-DRB4P13762 266 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 ANXA2RQ3ZCQ2 193 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 SCGB1D4Q6XE38 83 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 HLA-DRB4X5D2U9 266 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 A0A1B0GWB2 263 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 PRSS29PA6NIE9 313 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 NEXN-AS1Q8NBZ9 246 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 BAALCQ8WXS3 180 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 ZNF815PA8K554 130 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms