RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 SPANXA1Q9NS26 97 aa14.68□□□□□ -0.06
COL4A3BP-201ENST00000261415 IGHV7-81A0A0B4J1V7 117 aa14.67□□□□□ -0.06
COL4A3BP-201ENST00000261415 PRR31Q5SQ13 230 aa14.67□□□□□ -0.06
COL4A3BP-201ENST00000261415 DAZAP1Q96EP5 407 aaKnown RBP14.67□□□□□ -0.06
COL4A3BP-201ENST00000261415 ZNF414Q96IQ9 312 aa14.67□□□□□ -0.06
COL4A3BP-201ENST00000261415 CHAC1Q9BUX1 264 aa14.67□□□□□ -0.06
COL4A3BP-201ENST00000261415 UFC1Q9Y3C8 167 aa14.67□□□□□ -0.06
COL4A3BP-201ENST00000261415 J3KRW8 73 aa14.67□□□□□ -0.06
COL4A3BP-201ENST00000261415 K7ERJ3 54 aa14.67□□□□□ -0.06
COL4A3BP-201ENST00000261415 LY6G6DO95868 133 aa14.67□□□□□ -0.06
COL4A3BP-201ENST00000261415 TMEM160Q9NX00 188 aa14.67□□□□□ -0.06
COL4A3BP-201ENST00000261415 ARL3P36405 182 aa14.66□□□□□ -0.06
COL4A3BP-201ENST00000261415 ZFAND6Q6FIF0 208 aa14.66□□□□□ -0.06
COL4A3BP-201ENST00000261415 FAM167A-AS1Q96KT0 104 aa14.66□□□□□ -0.06
COL4A3BP-201ENST00000261415 HIVEP2P31629 2446 aa14.66□□□□□ -0.06
COL4A3BP-201ENST00000261415 MTORP42345 2549 aa14.66□□□□□ -0.06
COL4A3BP-201ENST00000261415 C19orf71A6NCJ1 209 aa14.66□□□□□ -0.06
COL4A3BP-201ENST00000261415 RNASE2P10153 161 aaKnown RBP14.66□□□□□ -0.06
COL4A3BP-201ENST00000261415 MLST8Q9BVC4 326 aa14.66□□□□□ -0.06
COL4A3BP-201ENST00000261415 SLC25A2Q9BXI2 301 aa14.66□□□□□ -0.06
COL4A3BP-201ENST00000261415 KLF12Q9Y4X4 402 aa14.66□□□□□ -0.06
COL4A3BP-201ENST00000261415 XGP55808 180 aa14.65□□□□□ -0.06
COL4A3BP-201ENST00000261415 SRSF8Q9BRL6 282 aaKnown RBP14.65□□□□□ -0.06
COL4A3BP-201ENST00000261415 HOXA3O43365 443 aaPredicted RBP14.64□□□□□ -0.07
COL4A3BP-201ENST00000261415 TAL2Q16559 108 aa14.64□□□□□ -0.07
COL4A3BP-201ENST00000261415 C2orf83Q53S99 150 aa14.64□□□□□ -0.07
COL4A3BP-201ENST00000261415 VPREB3Q9UKI3 123 aa14.64□□□□□ -0.07
COL4A3BP-201ENST00000261415 A0A1B0GW15 77 aa14.64□□□□□ -0.07
COL4A3BP-201ENST00000261415 ATP5IP56385 69 aaPredicted RBP14.63□□□□□ -0.07
COL4A3BP-201ENST00000261415 Q6AWC8 147 aa14.63□□□□□ -0.07
COL4A3BP-201ENST00000261415 SMIM20Q8N5G0 67 aa14.63□□□□□ -0.07
COL4A3BP-201ENST00000261415 GATD1Q8NB37 220 aa14.63□□□□□ -0.07
COL4A3BP-201ENST00000261415 PAXXQ9BUH6 204 aa14.63□□□□□ -0.07
COL4A3BP-201ENST00000261415 EPDR1Q9UM22 224 aa14.63□□□□□ -0.07
COL4A3BP-201ENST00000261415 A0A096LNJ9 63 aa14.62□□□□□ -0.07
COL4A3BP-201ENST00000261415 EGR2P11161 476 aaPredicted RBP14.62□□□□□ -0.07
COL4A3BP-201ENST00000261415 SUB1P53999 127 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL4A3BP-201ENST00000261415 ATP6V0E1O15342 81 aa14.62□□□□□ -0.07
COL4A3BP-201ENST00000261415 RIGQ13278 110 aa14.62□□□□□ -0.07
COL4A3BP-201ENST00000261415 PRELID3AQ96N28 172 aa14.62□□□□□ -0.07
COL4A3BP-201ENST00000261415 NSD1Q96L73 2696 aaPredicted RBP14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 LINC01548A6NM66 108 aa14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 HLA-DRB4P13762 266 aa14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 TCTAP57738 103 aa14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 C12orf74Q32Q52 190 aa14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 IFI27L1Q96BM0 104 aa14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 FMC1Q96HJ9 113 aa14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 HLA-DRB4X5D2U9 266 aa14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 A0A1B0GUT8 65 aa14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 HBDP02042 147 aa14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 BLCAPP62952 87 aa14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 RRN3P1Q2M238 152 aa14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 AMTNQ6UX39 209 aa14.61□□□□□ -0.07
COL4A3BP-201ENST00000261415 CUBNO60494 3623 aa14.6□□□□□ -0.07
COL4A3BP-201ENST00000261415 GAGE12JA6NER3 117 aa14.6□□□□□ -0.07
COL4A3BP-201ENST00000261415 GAGE7O76087 117 aa14.6□□□□□ -0.07
COL4A3BP-201ENST00000261415 GAGE12FP0CL80 117 aa14.6□□□□□ -0.07
COL4A3BP-201ENST00000261415 GAGE12GP0CL81 117 aa14.6□□□□□ -0.07
COL4A3BP-201ENST00000261415 GAGE12IP0CL82 117 aa14.6□□□□□ -0.07
COL4A3BP-201ENST00000261415 MYCNOSP40205 109 aa14.6□□□□□ -0.07
COL4A3BP-201ENST00000261415 GAGE4Q13068 117 aa14.6□□□□□ -0.07
COL4A3BP-201ENST00000261415 IGKV1OR2-108A0A075B7D4 117 aa14.59□□□□□ -0.07
COL4A3BP-201ENST00000261415 TRAV5A0A0B4J249 113 aa14.59□□□□□ -0.07
COL4A3BP-201ENST00000261415 NPIPB5A8MRT5 1133 aa14.59□□□□□ -0.07
COL4A3BP-201ENST00000261415 BRI3O95415 125 aa14.59□□□□□ -0.07
COL4A3BP-201ENST00000261415 LTAP01374 205 aa14.59□□□□□ -0.07
COL4A3BP-201ENST00000261415 LINC00322Q6ZN03 302 aaPredicted RBP14.59□□□□□ -0.07
COL4A3BP-201ENST00000261415 OR1L4Q8NGR5 311 aa14.59□□□□□ -0.07
COL4A3BP-201ENST00000261415 TRBV25-1A0A075B6N4 114 aa14.59□□□□□ -0.07
COL4A3BP-201ENST00000261415 TMEM262E9PQX1 116 aa14.59□□□□□ -0.07
COL4A3BP-201ENST00000261415 SLC25A5P05141 298 aaKnown RBP14.59□□□□□ -0.07
COL4A3BP-201ENST00000261415 IFI27P40305 119 aaPredicted RBP14.59□□□□□ -0.07
COL4A3BP-201ENST00000261415 PVRIGQ6DKI7 326 aa14.59□□□□□ -0.07
COL4A3BP-201ENST00000261415 CYSRT1A8MQ03 144 aa14.58□□□□□ -0.08
COL4A3BP-201ENST00000261415 IGHG2P01859 326 aa14.58□□□□□ -0.08
COL4A3BP-201ENST00000261415 ECSCRQ19T08 205 aa14.58□□□□□ -0.08
COL4A3BP-201ENST00000261415 CFAP126Q5VTH2 177 aa14.58□□□□□ -0.08
COL4A3BP-201ENST00000261415 Q71RC1 249 aaPredicted RBP14.58□□□□□ -0.08
COL4A3BP-201ENST00000261415 DUX5Q96PT3 197 aa14.58□□□□□ -0.08
COL4A3BP-201ENST00000261415 SRD5A1P18405 259 aa14.58□□□□□ -0.08
COL4A3BP-201ENST00000261415 Q6ZS46 218 aa14.58□□□□□ -0.08
COL4A3BP-201ENST00000261415 PRSS29PA6NIE9 313 aa14.57□□□□□ -0.08
COL4A3BP-201ENST00000261415 PYYP10082 97 aa14.57□□□□□ -0.08
COL4A3BP-201ENST00000261415 CD69Q07108 199 aa14.57□□□□□ -0.08
COL4A3BP-201ENST00000261415 TMEM86BQ8N661 226 aa14.57□□□□□ -0.08
COL4A3BP-201ENST00000261415 PPDPFLQ8WWR9 84 aa14.57□□□□□ -0.08
COL4A3BP-201ENST00000261415 F8P00451 2351 aa14.57□□□□□ -0.08
COL4A3BP-201ENST00000261415 COX7A2P2O60397 106 aa14.57□□□□□ -0.08
COL4A3BP-201ENST00000261415 GNG5P63218 68 aa14.57□□□□□ -0.08
COL4A3BP-201ENST00000261415 G3V318 75 aa14.56□□□□□ -0.08
COL4A3BP-201ENST00000261415 MORN5Q5VZ52 161 aa14.56□□□□□ -0.08
COL4A3BP-201ENST00000261415 FXYD5Q96DB9 178 aa14.56□□□□□ -0.08
COL4A3BP-201ENST00000261415 DNAJC9-AS1A6NH13 148 aa14.55□□□□□ -0.08
COL4A3BP-201ENST00000261415 IGF1P05019 195 aa14.55□□□□□ -0.08
COL4A3BP-201ENST00000261415 CRIP2P52943 208 aaPredicted RBP14.55□□□□□ -0.08
COL4A3BP-201ENST00000261415 MLANAQ16655 118 aa14.55□□□□□ -0.08
COL4A3BP-201ENST00000261415 C10orf113Q5VZT2 155 aa14.55□□□□□ -0.08
COL4A3BP-201ENST00000261415 FHL3Q13643 280 aa14.55□□□□□ -0.08
COL4A3BP-201ENST00000261415 NFE4Q86UQ8 179 aa14.55□□□□□ -0.08
COL4A3BP-201ENST00000261415 FAM110DQ8TAY7 271 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms