RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 IGKV3D-20A0A0C4DH25 116 aa10.11□□□□□ -0.79
VPS25-201ENST00000253794 A0A0J9YWU9 116 aa10.11□□□□□ -0.79
VPS25-201ENST00000253794 TEX48A0A1B0GUV7 120 aa10.11□□□□□ -0.79
VPS25-201ENST00000253794 C19orf71A6NCJ1 209 aa10.11□□□□□ -0.79
VPS25-201ENST00000253794 PGPEP1LA6NFU8 196 aa10.11□□□□□ -0.79
VPS25-201ENST00000253794 CBY3A6NI87 242 aa10.11□□□□□ -0.79
VPS25-201ENST00000253794 ZNF727A8MUV8 499 aa10.11□□□□□ -0.79
VPS25-201ENST00000253794 PRM2P04554 102 aa10.11□□□□□ -0.79
VPS25-201ENST00000253794 CXCL1P09341 107 aa10.11□□□□□ -0.79
VPS25-201ENST00000253794 DAZ2Q13117 558 aaKnown RBP10.11□□□□□ -0.79
VPS25-201ENST00000253794 MUC21Q5SSG8 566 aa10.11□□□□□ -0.79
VPS25-201ENST00000253794 OCC1Q8TAD7 63 aa10.11□□□□□ -0.79
VPS25-201ENST00000253794 SDF2L1Q9HCN8 221 aa10.11□□□□□ -0.79
VPS25-201ENST00000253794 LYRM9A8MSI8 78 aa10.1□□□□□ -0.79
VPS25-201ENST00000253794 KRBOX1C9JBD0 128 aa10.1□□□□□ -0.79
VPS25-201ENST00000253794 K7EN84 100 aa10.1□□□□□ -0.79
VPS25-201ENST00000253794 TYMSP04818 313 aa10.1□□□□□ -0.79
VPS25-201ENST00000253794 CEBPGP53567 150 aa10.1□□□□□ -0.79
VPS25-201ENST00000253794 TCL1AP56279 114 aa10.1□□□□□ -0.79
VPS25-201ENST00000253794 SOHLH1Q5JUK2 328 aa10.1□□□□□ -0.79
VPS25-201ENST00000253794 LINC01551Q86U37 167 aa10.1□□□□□ -0.79
VPS25-201ENST00000253794 ZNF575Q86XF7 245 aa10.1□□□□□ -0.79
VPS25-201ENST00000253794 IGHV3-16A0A0C4DH30 117 aa10.09□□□□□ -0.79
VPS25-201ENST00000253794 SFTA3P0C7M3 94 aa10.09□□□□□ -0.79
VPS25-201ENST00000253794 HTN1P15515 57 aa10.09□□□□□ -0.79
VPS25-201ENST00000253794 ZNF415Q09FC8 603 aa10.09□□□□□ -0.79
VPS25-201ENST00000253794 FAM231DQ6ZW35 169 aa10.09□□□□□ -0.79
VPS25-201ENST00000253794 COMMD7Q86VX2 200 aa10.09□□□□□ -0.79
VPS25-201ENST00000253794 LINC00612Q8N6U2 182 aa10.09□□□□□ -0.79
VPS25-201ENST00000253794 DKK2Q9UBU2 259 aa10.09□□□□□ -0.79
VPS25-201ENST00000253794 NAT8Q9UHE5 227 aa10.09□□□□□ -0.79
VPS25-201ENST00000253794 NAGKQ9UJ70 344 aa10.09□□□□□ -0.79
VPS25-201ENST00000253794 TIMM8BQ9Y5J9 83 aaPredicted RBP10.09□□□□□ -0.79
VPS25-201ENST00000253794 DEFB4AO15263 64 aa10.08□□□□□ -0.8
VPS25-201ENST00000253794 MGST1P10620 155 aaKnown RBP10.08□□□□□ -0.8
VPS25-201ENST00000253794 TMEM241Q24JQ0 296 aa10.08□□□□□ -0.8
VPS25-201ENST00000253794 PRR27Q6MZM9 219 aa10.08□□□□□ -0.8
VPS25-201ENST00000253794 SPXQ9BT56 116 aa10.08□□□□□ -0.8
VPS25-201ENST00000253794 SNURFLB1AK76 121 aa10.07□□□□□ -0.8
VPS25-201ENST00000253794 B4DEV8 164 aa10.07□□□□□ -0.8
VPS25-201ENST00000253794 GNRH2O43555 120 aa10.07□□□□□ -0.8
VPS25-201ENST00000253794 ORM1P02763 201 aa10.07□□□□□ -0.8
VPS25-201ENST00000253794 SPART-AS1P0CW21 52 aa10.07□□□□□ -0.8
VPS25-201ENST00000253794 PTH2Q96A98 100 aa10.07□□□□□ -0.8
VPS25-201ENST00000253794 C9orf85Q96MD7 179 aa10.07□□□□□ -0.8
VPS25-201ENST00000253794 GSN-AS1Q9NRJ2 163 aa10.07□□□□□ -0.8
VPS25-201ENST00000253794 MDFICQ9P1T7 246 aa10.07□□□□□ -0.8
VPS25-201ENST00000253794 TMEM218A2RU14 115 aa10.06□□□□□ -0.8
VPS25-201ENST00000253794 SPINK4O60575 86 aa10.06□□□□□ -0.8
VPS25-201ENST00000253794 MED14OSP0DP75 135 aa10.06□□□□□ -0.8
VPS25-201ENST00000253794 RNASE3P12724 160 aaKnown RBP10.06□□□□□ -0.8
VPS25-201ENST00000253794 RPL23P62829 140 aaKnown RBP10.06□□□□□ -0.8
VPS25-201ENST00000253794 OR5I1Q13606 314 aa10.06□□□□□ -0.8
VPS25-201ENST00000253794 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
VPS25-201ENST00000253794 FAM222AQ5U5X8 452 aa10.06□□□□□ -0.8
VPS25-201ENST00000253794 NUDT10Q8NFP7 164 aa10.06□□□□□ -0.8
VPS25-201ENST00000253794 DAZAP1Q96EP5 407 aaKnown RBP10.06□□□□□ -0.8
VPS25-201ENST00000253794 NUDT11Q96G61 164 aa10.06□□□□□ -0.8
VPS25-201ENST00000253794 C18orf15Q96N68 181 aa10.06□□□□□ -0.8
VPS25-201ENST00000253794 IL36BQ9NZH7 164 aa10.06□□□□□ -0.8
VPS25-201ENST00000253794 CELA1Q9UNI1 258 aa10.06□□□□□ -0.8
VPS25-201ENST00000253794 CXorf65A6NEN9 183 aa10.05□□□□□ -0.8
VPS25-201ENST00000253794 M0R036 132 aa10.05□□□□□ -0.8
VPS25-201ENST00000253794 P01737 135 aa10.05□□□□□ -0.8
VPS25-201ENST00000253794 ASIPP42127 132 aa10.05□□□□□ -0.8
VPS25-201ENST00000253794 EMP1P54849 157 aa10.05□□□□□ -0.8
VPS25-201ENST00000253794 RPS20P60866 119 aaKnown RBP10.05□□□□□ -0.8
VPS25-201ENST00000253794 PIK3CD-AS1Q5SR53 167 aa10.05□□□□□ -0.8
VPS25-201ENST00000253794 ISOC2Q96AB3 205 aa10.05□□□□□ -0.8
VPS25-201ENST00000253794 WWC2-AS2Q96NR7 200 aa10.05□□□□□ -0.8
VPS25-201ENST00000253794 NDUFAF3Q9BU61 184 aa10.05□□□□□ -0.8
VPS25-201ENST00000253794 NOP10Q9NPE3 64 aaKnown RBP10.05□□□□□ -0.8
VPS25-201ENST00000253794 SCRT2Q9NQ03 307 aa10.05□□□□□ -0.8
VPS25-201ENST00000253794 OSTCQ9NRP0 149 aa10.05□□□□□ -0.8
VPS25-201ENST00000253794 DYNC2H1Q8NCM8 4307 aaKnown RBP10.04□□□□□ -0.8
VPS25-201ENST00000253794 RPL19P84098 196 aaKnown RBP10.04□□□□□ -0.8
VPS25-201ENST00000253794 CT83Q5H943 113 aa10.04□□□□□ -0.8
VPS25-201ENST00000253794 C11orf45Q8TAV5 145 aa10.04□□□□□ -0.8
VPS25-201ENST00000253794 RASL10AQ92737 203 aa10.04□□□□□ -0.8
VPS25-201ENST00000253794 SSBP4Q9BWG4 385 aaPredicted RBP10.04□□□□□ -0.8
VPS25-201ENST00000253794 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
VPS25-201ENST00000253794 CSMD3Q7Z407 3707 aa10.03□□□□□ -0.8
VPS25-201ENST00000253794 M0R2P5 195 aa10.03□□□□□ -0.8
VPS25-201ENST00000253794 SNAI2O43623 268 aa10.03□□□□□ -0.8
VPS25-201ENST00000253794 ADCYAP1P18509 176 aa10.03□□□□□ -0.8
VPS25-201ENST00000253794 PNRC1Q12796 327 aaPredicted RBP10.03□□□□□ -0.8
VPS25-201ENST00000253794 C12orf74Q32Q52 190 aa10.03□□□□□ -0.8
VPS25-201ENST00000253794 C10orf91Q5T1B1 145 aa10.03□□□□□ -0.8
VPS25-201ENST00000253794 OR2D3Q8NGH3 330 aa10.03□□□□□ -0.8
VPS25-201ENST00000253794 SEC11CQ9BY50 192 aa10.03□□□□□ -0.8
VPS25-201ENST00000253794 RPP21Q9H633 154 aaKnown RBP10.03□□□□□ -0.8
VPS25-201ENST00000253794 XKRY2A2RUG3 117 aa10.02□□□□□ -0.81
VPS25-201ENST00000253794 OR5AL1P0C617 328 aa10.02□□□□□ -0.81
VPS25-201ENST00000253794 IGLC6P0CF74 106 aa10.02□□□□□ -0.81
VPS25-201ENST00000253794 Q6ZTI0 123 aa10.02□□□□□ -0.81
VPS25-201ENST00000253794 TMSB15BA0A087X1C1 80 aa10.01□□□□□ -0.81
VPS25-201ENST00000253794 GRIFINA4D1Z8 144 aa10.01□□□□□ -0.81
VPS25-201ENST00000253794 GATCO43716 136 aaKnown RBP10.01□□□□□ -0.81
VPS25-201ENST00000253794 NXPH4O95158 308 aa10.01□□□□□ -0.81
VPS25-201ENST00000253794 ARMS2P0C7Q2 107 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms