RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 SAMD13Q5VXD3 122 aa13.45□□□□□ -0.26
KLHDC3-201ENST00000244670 Q6AWC8 147 aa13.45□□□□□ -0.26
KLHDC3-201ENST00000244670 DYNLRB2Q8TF09 96 aa13.45□□□□□ -0.26
KLHDC3-201ENST00000244670 PPP1R14DQ9NXH3 145 aa13.45□□□□□ -0.26
KLHDC3-201ENST00000244670 CYSRT1A8MQ03 144 aa13.44□□□□□ -0.26
KLHDC3-201ENST00000244670 FABP5P3A8MUU1 101 aa13.44□□□□□ -0.26
KLHDC3-201ENST00000244670 LYZL1Q6UWQ5 148 aa13.44□□□□□ -0.26
KLHDC3-201ENST00000244670 LINC00477Q96M19 166 aa13.44□□□□□ -0.26
KLHDC3-201ENST00000244670 ADARB2-AS1A8MUL3 147 aa13.43□□□□□ -0.26
KLHDC3-201ENST00000244670 SNRPD3P62318 126 aaKnown RBP13.43□□□□□ -0.26
KLHDC3-201ENST00000244670 PRR9Q5T870 116 aa13.43□□□□□ -0.26
KLHDC3-201ENST00000244670 Q6ZQT7 251 aa13.43□□□□□ -0.26
KLHDC3-201ENST00000244670 TMEM61Q8N0U2 210 aa13.43□□□□□ -0.26
KLHDC3-201ENST00000244670 ORM1P02763 201 aa13.43□□□□□ -0.26
KLHDC3-201ENST00000244670 NTF3P20783 257 aa13.43□□□□□ -0.26
KLHDC3-201ENST00000244670 KRTDAPP60985 99 aa13.43□□□□□ -0.26
KLHDC3-201ENST00000244670 RIGQ13278 110 aa13.43□□□□□ -0.26
KLHDC3-201ENST00000244670 FAM19A2Q8N3H0 131 aa13.43□□□□□ -0.26
KLHDC3-201ENST00000244670 GATD1Q8NB37 220 aa13.43□□□□□ -0.26
KLHDC3-201ENST00000244670 C11orf21Q9P2W6 132 aa13.43□□□□□ -0.26
KLHDC3-201ENST00000244670 HSBP1O75506 76 aa13.42□□□□□ -0.26
KLHDC3-201ENST00000244670 IGLC6P0CF74 106 aa13.42□□□□□ -0.26
KLHDC3-201ENST00000244670 LINC01559Q495D7 138 aa13.42□□□□□ -0.26
KLHDC3-201ENST00000244670 AGRNO00468 2067 aa13.41□□□□□ -0.26
KLHDC3-201ENST00000244670 CTRLP40313 264 aa13.41□□□□□ -0.26
KLHDC3-201ENST00000244670 RPS20P60866 119 aaKnown RBP13.41□□□□□ -0.26
KLHDC3-201ENST00000244670 RNASEKQ6P5S7 137 aaKnown RBP13.41□□□□□ -0.26
KLHDC3-201ENST00000244670 BORCS7Q96B45 105 aa13.41□□□□□ -0.26
KLHDC3-201ENST00000244670 TEP1Q99973 2627 aaKnown RBP13.41□□□□□ -0.26
KLHDC3-201ENST00000244670 LOC102724200A0A096LPH7 203 aaPredicted RBP13.41□□□□□ -0.26
KLHDC3-201ENST00000244670 IGKV3D-20A0A0C4DH25 116 aa13.41□□□□□ -0.26
KLHDC3-201ENST00000244670 MUC21A0A0G2JKD1 596 aa13.41□□□□□ -0.26
KLHDC3-201ENST00000244670 MUC21A0A140T8X8 626 aa13.41□□□□□ -0.26
KLHDC3-201ENST00000244670 MUC21Q5SSG8 566 aa13.41□□□□□ -0.26
KLHDC3-201ENST00000244670 C14orf144Q96I85 54 aa13.41□□□□□ -0.26
KLHDC3-201ENST00000244670 SSTP61278 116 aa13.4□□□□□ -0.26
KLHDC3-201ENST00000244670 KIR3DS1Q14943 382 aa13.4□□□□□ -0.26
KLHDC3-201ENST00000244670 DEFB114Q30KQ6 69 aa13.4□□□□□ -0.26
KLHDC3-201ENST00000244670 CD300EQ496F6 205 aaPredicted RBP13.4□□□□□ -0.26
KLHDC3-201ENST00000244670 ZFAND2AQ8N6M9 145 aa13.4□□□□□ -0.26
KLHDC3-201ENST00000244670 FER1L6-AS1Q8NA97 138 aa13.4□□□□□ -0.26
KLHDC3-201ENST00000244670 LENEPQ9Y5L5 61 aa13.4□□□□□ -0.26
KLHDC3-201ENST00000244670 A0A1B0GW15 77 aa13.39□□□□□ -0.27
KLHDC3-201ENST00000244670 TEX43Q6ZNM6 134 aa13.39□□□□□ -0.27
KLHDC3-201ENST00000244670 NIT1Q86X76 327 aa13.39□□□□□ -0.27
KLHDC3-201ENST00000244670 IGKV3-20P01619 116 aa13.39□□□□□ -0.27
KLHDC3-201ENST00000244670 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.39□□□□□ -0.27
KLHDC3-201ENST00000244670 TENM1Q9UKZ4 2725 aa13.38□□□□□ -0.27
KLHDC3-201ENST00000244670 M0R2Z0 102 aa13.38□□□□□ -0.27
KLHDC3-201ENST00000244670 FAM19A4Q96LR4 140 aa13.38□□□□□ -0.27
KLHDC3-201ENST00000244670 KIR2DL5BA0A0G2JN68 375 aa13.37□□□□□ -0.27
KLHDC3-201ENST00000244670 KIR2DL5BA0A0G2JPC4 375 aa13.37□□□□□ -0.27
KLHDC3-201ENST00000244670 A0A0J9YX75 114 aa13.37□□□□□ -0.27
KLHDC3-201ENST00000244670 ZNF493Q6ZR52 646 aa13.37□□□□□ -0.27
KLHDC3-201ENST00000244670 KIR2DL5AQ8N109 375 aa13.37□□□□□ -0.27
KLHDC3-201ENST00000244670 RNASE4P34096 147 aaKnown RBP13.37□□□□□ -0.27
KLHDC3-201ENST00000244670 EBLN2Q6P2I7 272 aa13.37□□□□□ -0.27
KLHDC3-201ENST00000244670 C3orf79P0CE67 100 aa13.36□□□□□ -0.27
KLHDC3-201ENST00000244670 DEFB131AP59861 70 aa13.36□□□□□ -0.27
KLHDC3-201ENST00000244670 URB1-AS1Q96HZ7 61 aa13.36□□□□□ -0.27
KLHDC3-201ENST00000244670 NDUFAF3Q9BU61 184 aa13.36□□□□□ -0.27
KLHDC3-201ENST00000244670 VAMP8Q9BV40 100 aa13.36□□□□□ -0.27
KLHDC3-201ENST00000244670 ZNF124Q15973 351 aa13.35□□□□□ -0.27
KLHDC3-201ENST00000244670 TDRG1Q3Y452 100 aa13.35□□□□□ -0.27
KLHDC3-201ENST00000244670 NDUFA11Q86Y39 141 aa13.35□□□□□ -0.27
KLHDC3-201ENST00000244670 CNFNQ9BYD5 112 aa13.35□□□□□ -0.27
KLHDC3-201ENST00000244670 ATRQ13535 2644 aa13.35□□□□□ -0.27
KLHDC3-201ENST00000244670 KNCNA6PVL3 124 aa13.35□□□□□ -0.27
KLHDC3-201ENST00000244670 SAP30O75446 220 aa13.35□□□□□ -0.27
KLHDC3-201ENST00000244670 Q8N976 141 aa13.35□□□□□ -0.27
KLHDC3-201ENST00000244670 CHCHD1Q96BP2 118 aaKnown RBP13.35□□□□□ -0.27
KLHDC3-201ENST00000244670 APRG1Q8IVJ8 170 aa13.34□□□□□ -0.27
KLHDC3-201ENST00000244670 MSRB1Q9NZV6 116 aa13.34□□□□□ -0.27
KLHDC3-201ENST00000244670 PAM16Q9Y3D7 125 aa13.34□□□□□ -0.27
KLHDC3-201ENST00000244670 TRAV2A0A0B4J234 112 aa13.33□□□□□ -0.28
KLHDC3-201ENST00000244670 TWIST1Q15672 202 aa13.33□□□□□ -0.28
KLHDC3-201ENST00000244670 FOXI2Q6ZQN5 318 aa13.33□□□□□ -0.28
KLHDC3-201ENST00000244670 AMN1Q8IY45 258 aa13.33□□□□□ -0.28
KLHDC3-201ENST00000244670 TRAV21A0A0B4J279 112 aa13.33□□□□□ -0.28
KLHDC3-201ENST00000244670 LINC00614P0C842 121 aa13.33□□□□□ -0.28
KLHDC3-201ENST00000244670 MAP6D1Q9H9H5 199 aa13.33□□□□□ -0.28
KLHDC3-201ENST00000244670 TRBV7-9A0A0J9YWB2 115 aa13.32□□□□□ -0.28
KLHDC3-201ENST00000244670 OR4C46A6NHA9 309 aa13.32□□□□□ -0.28
KLHDC3-201ENST00000244670 FAM104BQ5XKR9 115 aa13.32□□□□□ -0.28
KLHDC3-201ENST00000244670 SPAG8Q99932 426 aaPredicted RBP13.32□□□□□ -0.28
KLHDC3-201ENST00000244670 ZNF256Q9Y2P7 627 aaPredicted RBP13.32□□□□□ -0.28
KLHDC3-201ENST00000244670 TRAV12-2A0A075B6T6 113 aa13.31□□□□□ -0.28
KLHDC3-201ENST00000244670 KLLNB2CW77 178 aa13.31□□□□□ -0.28
KLHDC3-201ENST00000244670 PF4P02776 101 aa13.31□□□□□ -0.28
KLHDC3-201ENST00000244670 PMCHL1Q16048 86 aa13.31□□□□□ -0.28
KLHDC3-201ENST00000244670 C20orf144Q9BQM9 153 aa13.31□□□□□ -0.28
KLHDC3-201ENST00000244670 SIGLEC8Q9NYZ4 499 aa13.31□□□□□ -0.28
KLHDC3-201ENST00000244670 DUSP14O95147 198 aaKnown RBP13.31□□□□□ -0.28
KLHDC3-201ENST00000244670 SPINK13Q1W4C9 94 aa13.31□□□□□ -0.28
KLHDC3-201ENST00000244670 TRAV25A0A0B4J276 109 aa13.3□□□□□ -0.28
KLHDC3-201ENST00000244670 IGHV1-24A0A0C4DH33 117 aa13.3□□□□□ -0.28
KLHDC3-201ENST00000244670 BTF3P20290 206 aaKnown RBP13.3□□□□□ -0.28
KLHDC3-201ENST00000244670 LEPP41159 167 aa13.3□□□□□ -0.28
KLHDC3-201ENST00000244670 OR10AG1Q8NH19 301 aa13.3□□□□□ -0.28
KLHDC3-201ENST00000244670 TRAV12-3A0A0B4J271 114 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms