RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 TRAV26-1A0A087WT03 109 aa5.96□□□□□ -1.45
RIF1-201ENST00000243326 MORN3Q6PF18 240 aaPredicted RBP5.96□□□□□ -1.45
RIF1-201ENST00000243326 FNDC1Q4ZHG4 1894 aaPredicted RBP5.96□□□□□ -1.45
RIF1-201ENST00000243326 BPTFQ12830 3046 aa5.96□□□□□ -1.45
RIF1-201ENST00000243326 PRAC2D3DTV9 90 aa5.96□□□□□ -1.45
RIF1-201ENST00000243326 LY96Q9Y6Y9 160 aa5.96□□□□□ -1.45
RIF1-201ENST00000243326 SUMO4Q6EEV6 95 aa5.96□□□□□ -1.45
RIF1-201ENST00000243326 CLEC2BQ92478 149 aa5.96□□□□□ -1.45
RIF1-201ENST00000243326 SPATA25Q9BR10 227 aa5.96□□□□□ -1.45
RIF1-201ENST00000243326 PLXNA2O75051 1894 aa5.96□□□□□ -1.46
RIF1-201ENST00000243326 RBAKDNA6NC62 111 aa5.96□□□□□ -1.46
RIF1-201ENST00000243326 CSRP1P21291 193 aaKnown RBP5.96□□□□□ -1.46
RIF1-201ENST00000243326 DYNAPQ8N1N2 210 aa5.96□□□□□ -1.46
RIF1-201ENST00000243326 TMEM14BQ9NUH8 114 aa5.96□□□□□ -1.46
RIF1-201ENST00000243326 EGR2P11161 476 aaPredicted RBP5.96□□□□□ -1.46
RIF1-201ENST00000243326 LOXL1Q08397 574 aaPredicted RBP5.96□□□□□ -1.46
RIF1-201ENST00000243326 WFDC11Q8NEX6 87 aa5.96□□□□□ -1.46
RIF1-201ENST00000243326 IGLL5B9A064 214 aa5.96□□□□□ -1.46
RIF1-201ENST00000243326 IGLC1P0CG04 106 aa5.96□□□□□ -1.46
RIF1-201ENST00000243326 CD59P13987 128 aa5.96□□□□□ -1.46
RIF1-201ENST00000243326 LMO1P25800 156 aa5.96□□□□□ -1.46
RIF1-201ENST00000243326 ZNRF2Q8NHG8 242 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 KIF26AQ9ULI4 1882 aaPredicted RBP5.95□□□□□ -1.46
RIF1-201ENST00000243326 E7EQL1 145 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 DUSP14O95147 198 aaKnown RBP5.95□□□□□ -1.46
RIF1-201ENST00000243326 C5orf47Q569G3 176 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 NDUFA12Q9UI09 145 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 PLXNA4Q9HCM2 1894 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 PRSS47A8MTI9 375 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 CRIPAKQ8N1N5 446 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 SCRT2Q9NQ03 307 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 PEMTQ9UBM1 199 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 DMBT1Q9UGM3 2413 aaPredicted RBP5.95□□□□□ -1.46
RIF1-201ENST00000243326 TRBV6-6A0A0A6YYG2 114 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 GAGE7O76087 117 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 GAGE12FP0CL80 117 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 GAGE12GP0CL81 117 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 GAGE12IP0CL82 117 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 PRR25Q96S07 402 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 SDHAF1A6NFY7 115 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 DEFB136Q30KP8 78 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 C8orf86Q6ZUL3 223 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 UTF1Q5T230 341 aa5.95□□□□□ -1.46
RIF1-201ENST00000243326 RPL39P62891 51 aaKnown RBP5.94□□□□□ -1.46
RIF1-201ENST00000243326 KIR2DL5BA0A0G2JN68 375 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 KIR2DL5BA0A0G2JPC4 375 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 Q6ZQT7 251 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 KIR2DL5AQ8N109 375 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 PRO1854Q9UHT4 67 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 IGLV2-23P01705 113 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 CRYGCP07315 174 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 ZFP36L1Q07352 338 aaKnown RBP5.94□□□□□ -1.46
RIF1-201ENST00000243326 ANKRD29Q8N6D5 301 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 PRSS22Q9GZN4 317 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 LGALS9BQ3B8N2 356 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 LGALS9CQ6DKI2 356 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 A0A087WX48 190 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 IGHV2-70DA0A0C4DH43 119 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 J3QW42 95 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 CRLF1O75462 422 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 C1orf43Q9BWL3 253 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 C15orf65H3BRN8 121 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 ESM1Q9NQ30 184 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 THSD7BQ9C0I4 1608 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 OPRPNQ99935 248 aaPredicted RBP5.94□□□□□ -1.46
RIF1-201ENST00000243326 CLPSL1A2RUU4 121 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 IL15RAQ13261 267 aa5.94□□□□□ -1.46
RIF1-201ENST00000243326 RNF183Q96D59 192 aa5.93□□□□□ -1.46
RIF1-201ENST00000243326 ZNF747Q9BV97 191 aa5.93□□□□□ -1.46
RIF1-201ENST00000243326 GNLYP22749 145 aa5.93□□□□□ -1.46
RIF1-201ENST00000243326 ZNF106Q9H2Y7 1883 aaKnown RBP5.93□□□□□ -1.46
RIF1-201ENST00000243326 A0A0J9YY99 117 aa5.93□□□□□ -1.46
RIF1-201ENST00000243326 IGLV3-19P01714 112 aa5.93□□□□□ -1.46
RIF1-201ENST00000243326 MUSTN1Q8IVN3 82 aa5.93□□□□□ -1.46
RIF1-201ENST00000243326 C2orf16Q68DN1 1984 aa5.93□□□□□ -1.46
RIF1-201ENST00000243326 MDS2Q8NDY4 140 aa5.93□□□□□ -1.46
RIF1-201ENST00000243326 MRPS18CQ9Y3D5 142 aaKnown RBP5.93□□□□□ -1.46
RIF1-201ENST00000243326 WISP2O76076 250 aa5.93□□□□□ -1.46
RIF1-201ENST00000243326 J3QQQ9 107 aa5.93□□□□□ -1.46
RIF1-201ENST00000243326 I3L3M4 83 aa5.93□□□□□ -1.46
RIF1-201ENST00000243326 DEFB125Q8N687 156 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 RNF114Q9Y508 228 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 IGHG4P01861 327 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 RPL36AP83881 106 aaKnown RBP5.92□□□□□ -1.46
RIF1-201ENST00000243326 GDF5OSQ5U4N7 250 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 RPL36ALQ969Q0 106 aaKnown RBP5.92□□□□□ -1.46
RIF1-201ENST00000243326 SHISA9B4DS77 424 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 BAALC-AS2P0C853 105 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 RBM3P98179 157 aaKnown RBP5.92□□□□□ -1.46
RIF1-201ENST00000243326 MBD3L4A6NDZ8 208 aaPredicted RBP5.92□□□□□ -1.46
RIF1-201ENST00000243326 MBD3L3A6NE82 208 aaPredicted RBP5.92□□□□□ -1.46
RIF1-201ENST00000243326 MBD3L5A6NJ08 208 aaPredicted RBP5.92□□□□□ -1.46
RIF1-201ENST00000243326 MT-ATP8P03928 68 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 ZNF833PQ6ZTB9 187 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 MBD3L2Q8NHZ7 208 aaPredicted RBP5.92□□□□□ -1.46
RIF1-201ENST00000243326 TRBV25-1A0A075B6N4 114 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 GRNP28799 593 aaKnown RBP5.92□□□□□ -1.46
RIF1-201ENST00000243326 LY6G5BQ8NDX9 201 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 IGLV10-54A0A075B6I4 117 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 NTN3O00634 580 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms