RNA–Protein interactions for RNA: ENST00000240100.6

DUSP4-201, Transcript of dual specificity phosphatase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP4, Length 5,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-201ENST00000240100 SP5Q6BEB4 398 aaPredicted RBP13.46□□□□□ -0.25
DUSP4-201ENST00000240100 TMEM243Q9BU79 118 aa13.46□□□□□ -0.25
DUSP4-201ENST00000240100 IGHV3-16A0A0C4DH30 117 aa13.46□□□□□ -0.25
DUSP4-201ENST00000240100 HIST1H4AP62805 103 aaKnown RBP13.46□□□□□ -0.25
DUSP4-201ENST00000240100 CRIP3Q6Q6R5 217 aa13.46□□□□□ -0.25
DUSP4-201ENST00000240100 GTSF1Q8WW33 167 aa13.46□□□□□ -0.25
DUSP4-201ENST00000240100 TEX22C9J3V5 150 aa13.46□□□□□ -0.26
DUSP4-201ENST00000240100 HERVK_113P63121 156 aa13.46□□□□□ -0.26
DUSP4-201ENST00000240100 CNOT1A5YKK6 2376 aaKnown RBP13.46□□□□□ -0.26
DUSP4-201ENST00000240100 ZNRF2Q8NHG8 242 aa13.45□□□□□ -0.26
DUSP4-201ENST00000240100 NCKAP5O14513 1909 aa13.45□□□□□ -0.26
DUSP4-201ENST00000240100 IGKV1OR2-108A0A075B7D4 117 aa13.44□□□□□ -0.26
DUSP4-201ENST00000240100 PCP2Q8IVA1 136 aa13.44□□□□□ -0.26
DUSP4-201ENST00000240100 CTSGP08311 255 aa13.44□□□□□ -0.26
DUSP4-201ENST00000240100 GNRH2O43555 120 aa13.44□□□□□ -0.26
DUSP4-201ENST00000240100 CRYGCP07315 174 aa13.44□□□□□ -0.26
DUSP4-201ENST00000240100 ZNF625Q96I27 306 aaPredicted RBP13.44□□□□□ -0.26
DUSP4-201ENST00000240100 DEFB130BP0DP73 79 aa13.44□□□□□ -0.26
DUSP4-201ENST00000240100 DEFB130AP0DP74 79 aa13.44□□□□□ -0.26
DUSP4-201ENST00000240100 TDRG1Q3Y452 100 aa13.43□□□□□ -0.26
DUSP4-201ENST00000240100 H3BMG7 143 aa13.43□□□□□ -0.26
DUSP4-201ENST00000240100 UTF1Q5T230 341 aa13.43□□□□□ -0.26
DUSP4-201ENST00000240100 GAGE12HA6NDE8 117 aa13.43□□□□□ -0.26
DUSP4-201ENST00000240100 LINC00173Q6ZV60 143 aa13.43□□□□□ -0.26
DUSP4-201ENST00000240100 SEM1Q6ZVN7 128 aa13.43□□□□□ -0.26
DUSP4-201ENST00000240100 Q6ZPA2 131 aa13.42□□□□□ -0.26
DUSP4-201ENST00000240100 CEP250Q9BV73 2442 aa13.42□□□□□ -0.26
DUSP4-201ENST00000240100 IGLV1-47P01700 117 aa13.42□□□□□ -0.26
DUSP4-201ENST00000240100 C16orf54Q6UWD8 224 aa13.42□□□□□ -0.26
DUSP4-201ENST00000240100 IGHV3-38A0A0C4DH36 116 aa13.41□□□□□ -0.26
DUSP4-201ENST00000240100 CCL25O15444 150 aa13.41□□□□□ -0.26
DUSP4-201ENST00000240100 A0A1W2PNU3 283 aaPredicted RBP13.41□□□□□ -0.26
DUSP4-201ENST00000240100 SOCS3O14543 225 aa13.41□□□□□ -0.26
DUSP4-201ENST00000240100 BUB3O43684 328 aa13.41□□□□□ -0.26
DUSP4-201ENST00000240100 GATA1P15976 413 aaPredicted RBP13.41□□□□□ -0.26
DUSP4-201ENST00000240100 ZNF48Q96MX3 618 aaPredicted RBP13.41□□□□□ -0.26
DUSP4-201ENST00000240100 GRNP28799 593 aaKnown RBP13.41□□□□□ -0.26
DUSP4-201ENST00000240100 F6UB75 175 aa13.41□□□□□ -0.26
DUSP4-201ENST00000240100 CTRLP40313 264 aa13.4□□□□□ -0.26
DUSP4-201ENST00000240100 TRAV13-2A0A0B4J235 113 aa13.4□□□□□ -0.26
DUSP4-201ENST00000240100 NCOR1O75376 2440 aa13.4□□□□□ -0.26
DUSP4-201ENST00000240100 MUC22E2RYF6 1773 aaPredicted RBP13.4□□□□□ -0.26
DUSP4-201ENST00000240100 ANKRD39Q53RE8 183 aa13.4□□□□□ -0.26
DUSP4-201ENST00000240100 LINC00574Q9H8X3 128 aa13.4□□□□□ -0.26
DUSP4-201ENST00000240100 DIDO1Q9BTC0 2240 aaKnown RBP13.4□□□□□ -0.26
DUSP4-201ENST00000240100 C19orf71A6NCJ1 209 aa13.39□□□□□ -0.27
DUSP4-201ENST00000240100 HIGD1BQ9P298 99 aa13.39□□□□□ -0.27
DUSP4-201ENST00000240100 VWC2LB2RUY7 222 aa13.39□□□□□ -0.27
DUSP4-201ENST00000240100 ZNF295-AS1Q8N0V1 137 aa13.39□□□□□ -0.27
DUSP4-201ENST00000240100 Q96MF0 132 aa13.39□□□□□ -0.27
DUSP4-201ENST00000240100 TRAV12-1A0A0B4J245 112 aa13.39□□□□□ -0.27
DUSP4-201ENST00000240100 Q8N9W7 124 aa13.39□□□□□ -0.27
DUSP4-201ENST00000240100 C9orf47Q6ZRZ4 202 aa13.39□□□□□ -0.27
DUSP4-201ENST00000240100 CFHR3Q02985 330 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 Q6ZVH6 145 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 VPREB3Q9UKI3 123 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 J3QKU1 62 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 GAGE7O76087 117 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 GAGE12FP0CL80 117 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 GAGE12GP0CL81 117 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 GAGE12IP0CL82 117 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 MED14OSP0DP75 135 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 PRSS47A8MTI9 375 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 SUMO4Q6EEV6 95 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 EDA2RQ9HAV5 297 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 E7EUB6 86 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 CFC1BP0CG36 223 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 CFC1P0CG37 223 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 ZNF503Q96F45 646 aa13.38□□□□□ -0.27
DUSP4-201ENST00000240100 EIF4EBP1Q13541 118 aaPredicted RBP13.37□□□□□ -0.27
DUSP4-201ENST00000240100 MAPK1IP1LQ8NDC0 245 aa13.37□□□□□ -0.27
DUSP4-201ENST00000240100 IGLL5B9A064 214 aa13.37□□□□□ -0.27
DUSP4-201ENST00000240100 RNF152Q8N8N0 203 aa13.37□□□□□ -0.27
DUSP4-201ENST00000240100 CARD19Q96LW7 228 aa13.37□□□□□ -0.27
DUSP4-201ENST00000240100 MRPL36Q9P0J6 103 aaKnown RBP13.37□□□□□ -0.27
DUSP4-201ENST00000240100 MSRB1Q9NZV6 116 aa13.37□□□□□ -0.27
DUSP4-201ENST00000240100 DOCK7Q96N67 2140 aa13.37□□□□□ -0.27
DUSP4-201ENST00000240100 MSMPQ1L6U9 139 aa13.36□□□□□ -0.27
DUSP4-201ENST00000240100 AMTNQ6UX39 209 aa13.36□□□□□ -0.27
DUSP4-201ENST00000240100 RPL39LQ96EH5 51 aaKnown RBP13.36□□□□□ -0.27
DUSP4-201ENST00000240100 SHANK1Q9Y566 2161 aa13.36□□□□□ -0.27
DUSP4-201ENST00000240100 BRWD1-AS2P59051 145 aa13.36□□□□□ -0.27
DUSP4-201ENST00000240100 GAGE6Q13070 117 aa13.36□□□□□ -0.27
DUSP4-201ENST00000240100 C5orf56Q8N8D9 126 aa13.36□□□□□ -0.27
DUSP4-201ENST00000240100 EML6Q6ZMW3 1958 aa13.36□□□□□ -0.27
DUSP4-201ENST00000240100 HOXD3P31249 432 aaPredicted RBP13.36□□□□□ -0.27
DUSP4-201ENST00000240100 DEFB112Q30KQ8 113 aa13.36□□□□□ -0.27
DUSP4-201ENST00000240100 NUP210LQ5VU65 1888 aa13.35□□□□□ -0.27
DUSP4-201ENST00000240100 IGKV1D-37A0A075B6S9 117 aa13.35□□□□□ -0.27
DUSP4-201ENST00000240100 CGB3P0DN86 165 aa13.35□□□□□ -0.27
DUSP4-201ENST00000240100 CGB7P0DN87 165 aa13.35□□□□□ -0.27
DUSP4-201ENST00000240100 PFN2P35080 140 aa13.35□□□□□ -0.27
DUSP4-201ENST00000240100 DAD1P61803 113 aa13.35□□□□□ -0.27
DUSP4-201ENST00000240100 A0A1B0GXF2 115 aa13.35□□□□□ -0.27
DUSP4-201ENST00000240100 ZFP2Q6ZN57 461 aa13.35□□□□□ -0.27
DUSP4-201ENST00000240100 SPAG8Q99932 426 aaPredicted RBP13.34□□□□□ -0.27
DUSP4-201ENST00000240100 IFITM1P13164 125 aa13.34□□□□□ -0.27
DUSP4-201ENST00000240100 Q8N7P7 452 aa13.34□□□□□ -0.27
DUSP4-201ENST00000240100 ZNF318Q5VUA4 2279 aa13.34□□□□□ -0.27
DUSP4-201ENST00000240100 FRMD6-AS1P0C7T7 363 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms