RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 LTAP01374 205 aa10.81□□□□□ -0.68
RPA3-201ENST00000223129 SRP19P09132 144 aaKnown RBP10.81□□□□□ -0.68
RPA3-201ENST00000223129 MIFP14174 115 aa10.81□□□□□ -0.68
RPA3-201ENST00000223129 RRN3P1Q2M238 152 aa10.81□□□□□ -0.68
RPA3-201ENST00000223129 Q6AWC8 147 aa10.81□□□□□ -0.68
RPA3-201ENST00000223129 TRBV6-1A0A0K0K1D8 114 aa10.8□□□□□ -0.68
RPA3-201ENST00000223129 TAS2R60P59551 318 aa10.8□□□□□ -0.68
RPA3-201ENST00000223129 MUC21Q5SSG8 566 aa10.8□□□□□ -0.68
RPA3-201ENST00000223129 ZFP30Q9Y2G7 519 aa10.8□□□□□ -0.68
RPA3-201ENST00000223129 SMIM9A6NGZ8 99 aa10.8□□□□□ -0.68
RPA3-201ENST00000223129 EMP1P54849 157 aa10.8□□□□□ -0.68
RPA3-201ENST00000223129 BAGE2Q86Y30 109 aa10.8□□□□□ -0.68
RPA3-201ENST00000223129 ZC2HC1AQ96GY0 325 aa10.8□□□□□ -0.68
RPA3-201ENST00000223129 CEBPGP53567 150 aa10.79□□□□□ -0.68
RPA3-201ENST00000223129 PYGO2Q9BRQ0 406 aa10.79□□□□□ -0.68
RPA3-201ENST00000223129 EDA2RQ9HAV5 297 aa10.79□□□□□ -0.68
RPA3-201ENST00000223129 NIT2Q9NQR4 276 aa10.79□□□□□ -0.68
RPA3-201ENST00000223129 CRIP1P50238 77 aa10.79□□□□□ -0.68
RPA3-201ENST00000223129 TMEM183AQ8IXX5 376 aa10.79□□□□□ -0.68
RPA3-201ENST00000223129 GSN-AS1Q9NRJ2 163 aa10.79□□□□□ -0.68
RPA3-201ENST00000223129 NAGKQ9UJ70 344 aa10.79□□□□□ -0.68
RPA3-201ENST00000223129 TP53TG3Q9ULZ0 132 aa10.79□□□□□ -0.68
RPA3-201ENST00000223129 IGHV1OR15-1A0A075B7D0 117 aa10.78□□□□□ -0.68
RPA3-201ENST00000223129 TRAV21A0A0B4J279 112 aa10.78□□□□□ -0.68
RPA3-201ENST00000223129 CXorf65A6NEN9 183 aa10.78□□□□□ -0.68
RPA3-201ENST00000223129 S100PP25815 95 aa10.78□□□□□ -0.68
RPA3-201ENST00000223129 CENPWQ5EE01 88 aa10.78□□□□□ -0.68
RPA3-201ENST00000223129 STAB2Q8WWQ8 2551 aa10.78□□□□□ -0.68
RPA3-201ENST00000223129 PGPEP1LA6NFU8 196 aa10.77□□□□□ -0.68
RPA3-201ENST00000223129 TMEM250H0YL14 139 aa10.77□□□□□ -0.68
RPA3-201ENST00000223129 PFN1P07737 140 aaKnown RBP10.77□□□□□ -0.68
RPA3-201ENST00000223129 ZNF674Q2M3X9 581 aa10.77□□□□□ -0.68
RPA3-201ENST00000223129 MLST8Q9BVC4 326 aa10.77□□□□□ -0.68
RPA3-201ENST00000223129 PARLQ9H300 379 aa10.77□□□□□ -0.68
RPA3-201ENST00000223129 C11orf21Q9P2W6 132 aa10.77□□□□□ -0.68
RPA3-201ENST00000223129 TRBV20OR9-2A0A075B6H5 130 aa10.77□□□□□ -0.69
RPA3-201ENST00000223129 CBY3A6NI87 242 aa10.77□□□□□ -0.69
RPA3-201ENST00000223129 LINC00587B1AMM8 73 aa10.77□□□□□ -0.69
RPA3-201ENST00000223129 RPS10P46783 165 aaKnown RBP10.77□□□□□ -0.69
RPA3-201ENST00000223129 COX8CQ7Z4L0 72 aa10.77□□□□□ -0.69
RPA3-201ENST00000223129 C11orf68Q9H3H3 251 aaKnown RBP10.77□□□□□ -0.69
RPA3-201ENST00000223129 B4DEV8 164 aa10.76□□□□□ -0.69
RPA3-201ENST00000223129 HOXA5P20719 270 aa10.76□□□□□ -0.69
RPA3-201ENST00000223129 ANXA2RQ3ZCQ2 193 aa10.76□□□□□ -0.69
RPA3-201ENST00000223129 FAM159AQ6UWV7 190 aa10.76□□□□□ -0.69
RPA3-201ENST00000223129 RNASE8Q8TDE3 154 aaKnown RBP10.76□□□□□ -0.69
RPA3-201ENST00000223129 PLAC8L1A1L4L8 177 aa10.75□□□□□ -0.69
RPA3-201ENST00000223129 FABP5P3A8MUU1 101 aa10.75□□□□□ -0.69
RPA3-201ENST00000223129 GNRH2O43555 120 aa10.75□□□□□ -0.69
RPA3-201ENST00000223129 IGLV2-8P01709 118 aa10.75□□□□□ -0.69
RPA3-201ENST00000223129 GNG4P50150 75 aa10.75□□□□□ -0.69
RPA3-201ENST00000223129 TMEM263Q8WUH6 116 aaKnown RBP10.75□□□□□ -0.69
RPA3-201ENST00000223129 LINC00467Q9BRT7 94 aa10.75□□□□□ -0.69
RPA3-201ENST00000223129 CELA1Q9UNI1 258 aa10.75□□□□□ -0.69
RPA3-201ENST00000223129 ZNF727A8MUV8 499 aa10.75□□□□□ -0.69
RPA3-201ENST00000223129 SH2D1AO60880 128 aa10.75□□□□□ -0.69
RPA3-201ENST00000223129 ELOBQ15370 118 aa10.75□□□□□ -0.69
RPA3-201ENST00000223129 C16orf74Q96GX8 76 aa10.75□□□□□ -0.69
RPA3-201ENST00000223129 MGST1P10620 155 aaKnown RBP10.74□□□□□ -0.69
RPA3-201ENST00000223129 FAM162BQ5T6X4 162 aa10.74□□□□□ -0.69
RPA3-201ENST00000223129 PRR27Q6MZM9 219 aa10.74□□□□□ -0.69
RPA3-201ENST00000223129 TMEM189A5PLL7 270 aa10.74□□□□□ -0.69
RPA3-201ENST00000223129 PNRC1Q12796 327 aaPredicted RBP10.74□□□□□ -0.69
RPA3-201ENST00000223129 ZNF493Q6ZR52 646 aa10.74□□□□□ -0.69
RPA3-201ENST00000223129 MDFICQ9P1T7 246 aa10.74□□□□□ -0.69
RPA3-201ENST00000223129 IGKV3D-20A0A0C4DH25 116 aa10.73□□□□□ -0.69
RPA3-201ENST00000223129 NDUFS6O75380 124 aaKnown RBP10.73□□□□□ -0.69
RPA3-201ENST00000223129 TDRG1Q3Y452 100 aa10.73□□□□□ -0.69
RPA3-201ENST00000223129 FAM222AQ5U5X8 452 aa10.73□□□□□ -0.69
RPA3-201ENST00000223129 C11orf72Q8NBR9 251 aa10.73□□□□□ -0.69
RPA3-201ENST00000223129 OCC1Q8TAD7 63 aa10.73□□□□□ -0.69
RPA3-201ENST00000223129 NOP10Q9NPE3 64 aaKnown RBP10.73□□□□□ -0.69
RPA3-201ENST00000223129 DNAH7Q8WXX0 4024 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 ORM1P02763 201 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 TYMSP04818 313 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 CXCL1P09341 107 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 NANOS2P60321 138 aaKnown RBP10.72□□□□□ -0.69
RPA3-201ENST00000223129 OR5I1Q13606 314 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 IL17DQ8TAD2 202 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 C11orf45Q8TAV5 145 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 WWC2-AS2Q96NR7 200 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 DKK2Q9UBU2 259 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 C9JCJ5 164 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 NDUFA6P56556 154 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 KCNS1Q96KK3 526 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 SMIM7Q9BQ49 75 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 SDF2L1Q9HCN8 221 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 TMEM242Q9NWH2 141 aa10.72□□□□□ -0.69
RPA3-201ENST00000223129 TIMM8BQ9Y5J9 83 aaPredicted RBP10.72□□□□□ -0.69
RPA3-201ENST00000223129 SNURFLB1AK76 121 aa10.71□□□□□ -0.69
RPA3-201ENST00000223129 S100A2P29034 98 aa10.71□□□□□ -0.69
RPA3-201ENST00000223129 TMSB15BA0A087X1C1 80 aa10.7□□□□□ -0.7
RPA3-201ENST00000223129 K7EN84 100 aa10.7□□□□□ -0.7
RPA3-201ENST00000223129 SPART-AS1P0CW21 52 aa10.7□□□□□ -0.7
RPA3-201ENST00000223129 SMIM12Q96EX1 92 aa10.7□□□□□ -0.7
RPA3-201ENST00000223129 TRGV11A0A075B6L2 103 aa10.7□□□□□ -0.7
RPA3-201ENST00000223129 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
RPA3-201ENST00000223129 IGHV3-16A0A0C4DH30 117 aa10.7□□□□□ -0.7
RPA3-201ENST00000223129 RPL19P84098 196 aaKnown RBP10.7□□□□□ -0.7
RPA3-201ENST00000223129 IBA57Q5T440 356 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms