RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 DLX4Q92988 240 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-201ENST00000216840 PEMTQ9UBM1 199 aa12.89□□□□□ -0.35
RABGGTA-201ENST00000216840 A0A0J9YX75 114 aa12.89□□□□□ -0.35
RABGGTA-201ENST00000216840 KLLNB2CW77 178 aa12.89□□□□□ -0.35
RABGGTA-201ENST00000216840 SNAI2O43623 268 aa12.89□□□□□ -0.35
RABGGTA-201ENST00000216840 OR5AL1P0C617 328 aa12.89□□□□□ -0.35
RABGGTA-201ENST00000216840 LINC00614P0C842 121 aa12.89□□□□□ -0.35
RABGGTA-201ENST00000216840 OR10AG1Q8NH19 301 aa12.89□□□□□ -0.35
RABGGTA-201ENST00000216840 C16orf95Q9H693 158 aa12.89□□□□□ -0.35
RABGGTA-201ENST00000216840 M0R2Z0 102 aa12.88□□□□□ -0.35
RABGGTA-201ENST00000216840 CUBNO60494 3623 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 MTORP42345 2549 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 CD28P10747 220 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 KRTDAPP60985 99 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 ORMDL3Q8N138 153 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 LINC01006Q8NI28 216 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 ZNF418Q8TF45 676 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 RNF185Q96GF1 192 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 H3BVH4 76 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 CSN3P07498 182 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 HILS1P60008 231 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 ANXA2RQ3ZCQ2 193 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 C11orf44Q8N8P7 122 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 PRELID3AQ96N28 172 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 NF1P21359 2839 aa12.87□□□□□ -0.35
RABGGTA-201ENST00000216840 IGHV4-4A0A075B6R2 117 aa12.86□□□□□ -0.35
RABGGTA-201ENST00000216840 LINC00587B1AMM8 73 aa12.86□□□□□ -0.35
RABGGTA-201ENST00000216840 RAB4AP20338 218 aa12.86□□□□□ -0.35
RABGGTA-201ENST00000216840 RAX2Q96IS3 184 aa12.86□□□□□ -0.35
RABGGTA-201ENST00000216840 ODF3Q96PU9 254 aa12.86□□□□□ -0.35
RABGGTA-201ENST00000216840 LY6G6DO95868 133 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 PKIAP61925 76 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 CACNG7P62955 275 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 PMCHL1Q16048 86 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 EBLN2Q6P2I7 272 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 Q8N976 141 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 AGRNO00468 2067 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 IGHV1-24A0A0C4DH33 117 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 SMKR1H3BMG3 65 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 C3orf79P0CE67 100 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 CKS2P33552 79 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 ZNF664Q8N3J9 261 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 PRO1933Q9H354 126 aa12.85□□□□□ -0.35
RABGGTA-201ENST00000216840 SORL1Q92673 2214 aa12.84□□□□□ -0.35
RABGGTA-201ENST00000216840 LEPP41159 167 aa12.84□□□□□ -0.35
RABGGTA-201ENST00000216840 A0A1W2PRX2 142 aa12.84□□□□□ -0.35
RABGGTA-201ENST00000216840 ASIPP42127 132 aa12.84□□□□□ -0.35
RABGGTA-201ENST00000216840 FHL3Q13643 280 aa12.84□□□□□ -0.35
RABGGTA-201ENST00000216840 SPANXN1Q5VSR9 72 aa12.84□□□□□ -0.35
RABGGTA-201ENST00000216840 FOXI2Q6ZQN5 318 aa12.84□□□□□ -0.35
RABGGTA-201ENST00000216840 GNRH2O43555 120 aa12.83□□□□□ -0.36
RABGGTA-201ENST00000216840 NCR2O95944 276 aa12.83□□□□□ -0.36
RABGGTA-201ENST00000216840 IGKV3-20P01619 116 aa12.83□□□□□ -0.36
RABGGTA-201ENST00000216840 EVI2AP22794 236 aa12.83□□□□□ -0.36
RABGGTA-201ENST00000216840 TMEM61Q8N0U2 210 aa12.83□□□□□ -0.36
RABGGTA-201ENST00000216840 CITED2Q99967 270 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-201ENST00000216840 TIMM8BQ9Y5J9 83 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-201ENST00000216840 TRAV2A0A0B4J234 112 aa12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 DUSP14O95147 198 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 TEX43Q6ZNM6 134 aa12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 PRSS3P2Q8NHM4 247 aa12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 SIGLEC8Q9NYZ4 499 aa12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 HIVEP2P31629 2446 aa12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 C7orf71A4D174 169 aa12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 TSTD3H0UI37 97 aa12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 NPYP01303 97 aa12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 MED14OSP0DP75 135 aa12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 S100A4P26447 101 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 IFI27P40305 119 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 DYNLRB2Q8TF09 96 aa12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 SCRT2Q9NQ03 307 aa12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 TSSC4Q9Y5U2 329 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-201ENST00000216840 TRAV12-3A0A0B4J271 114 aa12.81□□□□□ -0.36
RABGGTA-201ENST00000216840 LOC389332A0A1B0GUA5 103 aa12.81□□□□□ -0.36
RABGGTA-201ENST00000216840 CCL24O00175 119 aa12.81□□□□□ -0.36
RABGGTA-201ENST00000216840 PPBPP02775 128 aa12.81□□□□□ -0.36
RABGGTA-201ENST00000216840 DEFB114Q30KQ6 69 aa12.81□□□□□ -0.36
RABGGTA-201ENST00000216840 FA2HQ7L5A8 372 aa12.81□□□□□ -0.36
RABGGTA-201ENST00000216840 AP5S1Q9NUS5 200 aa12.81□□□□□ -0.36
RABGGTA-201ENST00000216840 SPRY2O43597 315 aa12.81□□□□□ -0.36
RABGGTA-201ENST00000216840 GAS8-AS1O95177 125 aa12.81□□□□□ -0.36
RABGGTA-201ENST00000216840 RNASE3P12724 160 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-201ENST00000216840 SMIM15Q7Z3B0 74 aa12.81□□□□□ -0.36
RABGGTA-201ENST00000216840 NDUFA7O95182 113 aa12.8□□□□□ -0.36
RABGGTA-201ENST00000216840 AMTNQ6UX39 209 aa12.8□□□□□ -0.36
RABGGTA-201ENST00000216840 DEFB131AP59861 70 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 TDRG1Q3Y452 100 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 FAM159AQ6UWV7 190 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 PHLDA3Q9Y5J5 127 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 TRAV12-2A0A075B6T6 113 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 KNCNA6PVL3 124 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 TCF21O43680 179 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 LEPROTL1O95214 131 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 BTF3P20290 206 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 TSPOP30536 169 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 CDKN1BP46527 198 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 SPINK13Q1W4C9 94 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 LINC00173Q6ZV60 143 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 LAMTOR2Q9Y2Q5 125 aa12.79□□□□□ -0.36
RABGGTA-201ENST00000216840 NOTCH2Q04721 2471 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 270.4 ms