RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 PRSS3P2Q8NHM4 247 aa22.28■■□□□ 1.16
PABPN1-201ENST00000216727 SONP18583 2426 aaKnown RBP22.28■■□□□ 1.16
PABPN1-201ENST00000216727 ITPR2Q14571 2701 aa22.28■■□□□ 1.16
PABPN1-201ENST00000216727 CTAG1AP78358 180 aa22.28■■□□□ 1.16
PABPN1-201ENST00000216727 DEFA6Q01524 100 aa22.28■■□□□ 1.16
PABPN1-201ENST00000216727 C18orf65Q6ZTR6 163 aa22.28■■□□□ 1.16
PABPN1-201ENST00000216727 KLLNB2CW77 178 aa22.27■■□□□ 1.16
PABPN1-201ENST00000216727 LINC01619G3V211 115 aa22.27■■□□□ 1.16
PABPN1-201ENST00000216727 FA2HQ7L5A8 372 aa22.27■■□□□ 1.16
PABPN1-201ENST00000216727 VAMP8Q9BV40 100 aa22.27■■□□□ 1.16
PABPN1-201ENST00000216727 LEPROTL1O95214 131 aa22.26■■□□□ 1.15
PABPN1-201ENST00000216727 RNASE4P34096 147 aaKnown RBP22.26■■□□□ 1.15
PABPN1-201ENST00000216727 ZNF688P0C7X2 276 aa22.25■■□□□ 1.15
PABPN1-201ENST00000216727 TFPI2P48307 235 aa22.25■■□□□ 1.15
PABPN1-201ENST00000216727 DEFB136Q30KP8 78 aa22.25■■□□□ 1.15
PABPN1-201ENST00000216727 ODF3Q96PU9 254 aa22.25■■□□□ 1.15
PABPN1-201ENST00000216727 C20orf144Q9BQM9 153 aa22.25■■□□□ 1.15
PABPN1-201ENST00000216727 YAE1D1Q9NRH1 226 aa22.25■■□□□ 1.15
PABPN1-201ENST00000216727 SIGLEC8Q9NYZ4 499 aa22.25■■□□□ 1.15
PABPN1-201ENST00000216727 LAMTOR2Q9Y2Q5 125 aa22.25■■□□□ 1.15
PABPN1-201ENST00000216727 IFI27P40305 119 aaPredicted RBP22.24■■□□□ 1.15
PABPN1-201ENST00000216727 SLURP1P55000 103 aa22.24■■□□□ 1.15
PABPN1-201ENST00000216727 PSMG4Q5JS54 123 aa22.24■■□□□ 1.15
PABPN1-201ENST00000216727 ESM1Q9NQ30 184 aa22.24■■□□□ 1.15
PABPN1-201ENST00000216727 CRXO43186 299 aaPredicted RBP22.24■■□□□ 1.15
PABPN1-201ENST00000216727 ADAMTSL5Q6ZMM2 481 aa22.24■■□□□ 1.15
PABPN1-201ENST00000216727 TMEM70Q9BUB7 260 aa22.24■■□□□ 1.15
PABPN1-201ENST00000216727 H3BVH4 76 aa22.23■■□□□ 1.15
PABPN1-201ENST00000216727 OR11H1Q8NG94 326 aa22.23■■□□□ 1.15
PABPN1-201ENST00000216727 MED14OSP0DP75 135 aa22.23■■□□□ 1.15
PABPN1-201ENST00000216727 KIR3DS1Q14943 382 aa22.23■■□□□ 1.15
PABPN1-201ENST00000216727 ANXA2RQ3ZCQ2 193 aa22.23■■□□□ 1.15
PABPN1-201ENST00000216727 SPANXN1Q5VSR9 72 aa22.23■■□□□ 1.15
PABPN1-201ENST00000216727 SMIM15Q7Z3B0 74 aa22.23■■□□□ 1.15
PABPN1-201ENST00000216727 WFDC12Q8WWY7 111 aa22.23■■□□□ 1.15
PABPN1-201ENST00000216727 A0A0J9YX75 114 aa22.22■■□□□ 1.15
PABPN1-201ENST00000216727 NPYP01303 97 aa22.22■■□□□ 1.15
PABPN1-201ENST00000216727 C14orf144Q96I85 54 aa22.22■■□□□ 1.15
PABPN1-201ENST00000216727 NDUFAF3Q9BU61 184 aa22.22■■□□□ 1.15
PABPN1-201ENST00000216727 SMKR1H3BMG3 65 aa22.21■■□□□ 1.15
PABPN1-201ENST00000216727 ASIPP42127 132 aa22.21■■□□□ 1.15
PABPN1-201ENST00000216727 OR1N2Q8NGR9 330 aa22.21■■□□□ 1.15
PABPN1-201ENST00000216727 DPF1Q92782 380 aa22.21■■□□□ 1.15
PABPN1-201ENST00000216727 TCF21O43680 179 aa22.21■■□□□ 1.15
PABPN1-201ENST00000216727 PEMTQ9UBM1 199 aa22.21■■□□□ 1.15
PABPN1-201ENST00000216727 HSPB8Q9UJY1 196 aa22.21■■□□□ 1.15
PABPN1-201ENST00000216727 PAM16Q9Y3D7 125 aa22.21■■□□□ 1.15
PABPN1-201ENST00000216727 NCR2O95944 276 aa22.2■■□□□ 1.14
PABPN1-201ENST00000216727 EVI2AP22794 236 aa22.2■■□□□ 1.14
PABPN1-201ENST00000216727 LOC389332A0A1B0GUA5 103 aa22.19■■□□□ 1.14
PABPN1-201ENST00000216727 SCRT2Q9NQ03 307 aa22.19■■□□□ 1.14
PABPN1-201ENST00000216727 S100A4P26447 101 aaKnown RBP22.18■■□□□ 1.14
PABPN1-201ENST00000216727 LEPP41159 167 aa22.18■■□□□ 1.14
PABPN1-201ENST00000216727 KHDC1LQ5JSQ8 128 aa22.18■■□□□ 1.14
PABPN1-201ENST00000216727 LINC00173Q6ZV60 143 aa22.18■■□□□ 1.14
PABPN1-201ENST00000216727 OR9G4Q8NGQ1 327 aa22.18■■□□□ 1.14
PABPN1-201ENST00000216727 SYS1-DBNDD2H3BUS1 97 aa22.18■■□□□ 1.14
PABPN1-201ENST00000216727 SCGB2A2Q13296 93 aa22.18■■□□□ 1.14
PABPN1-201ENST00000216727 KLHL30-AS1Q8NEE0 82 aa22.18■■□□□ 1.14
PABPN1-201ENST00000216727 MAP1LC3AQ9H492 121 aa22.16■■□□□ 1.14
PABPN1-201ENST00000216727 AKAP9Q99996 3911 aa22.16■■□□□ 1.14
PABPN1-201ENST00000216727 MAP1LC3CQ9BXW4 147 aa22.15■■□□□ 1.14
PABPN1-201ENST00000216727 TRAV2A0A0B4J234 112 aa22.14■■□□□ 1.14
PABPN1-201ENST00000216727 DUSP14O95147 198 aaKnown RBP22.14■■□□□ 1.14
PABPN1-201ENST00000216727 TNFRSF6BO95407 300 aa22.14■■□□□ 1.14
PABPN1-201ENST00000216727 RNASE1P07998 156 aaKnown RBP22.14■■□□□ 1.14
PABPN1-201ENST00000216727 FOXI2Q6ZQN5 318 aa22.14■■□□□ 1.14
PABPN1-201ENST00000216727 ACANP16112 2415 aa22.14■■□□□ 1.13
PABPN1-201ENST00000216727 A0A096LNJ9 63 aa22.14■■□□□ 1.13
PABPN1-201ENST00000216727 GAS8-AS1O95177 125 aa22.14■■□□□ 1.13
PABPN1-201ENST00000216727 SPATA12Q7Z6I5 190 aa22.14■■□□□ 1.13
PABPN1-201ENST00000216727 C7orf71A4D174 169 aa22.13■■□□□ 1.13
PABPN1-201ENST00000216727 LINC01546A6NGU7 62 aa22.13■■□□□ 1.13
PABPN1-201ENST00000216727 GNRH2O43555 120 aa22.13■■□□□ 1.13
PABPN1-201ENST00000216727 PHLDA3Q9Y5J5 127 aa22.13■■□□□ 1.13
PABPN1-201ENST00000216727 TIMM8BQ9Y5J9 83 aaPredicted RBP22.13■■□□□ 1.13
PABPN1-201ENST00000216727 RNASE3P12724 160 aaKnown RBP22.13■■□□□ 1.13
PABPN1-201ENST00000216727 PET117Q6UWS5 81 aa22.13■■□□□ 1.13
PABPN1-201ENST00000216727 FAM159AQ6UWV7 190 aa22.13■■□□□ 1.13
PABPN1-201ENST00000216727 DLX4Q92988 240 aaPredicted RBP22.13■■□□□ 1.13
PABPN1-201ENST00000216727 DUX3Q96PT4 197 aa22.13■■□□□ 1.13
PABPN1-201ENST00000216727 ZNF747Q9BV97 191 aa22.13■■□□□ 1.13
PABPN1-201ENST00000216727 TMEM160Q9NX00 188 aa22.13■■□□□ 1.13
PABPN1-201ENST00000216727 SPATA45Q537H7 98 aa22.12■■□□□ 1.13
PABPN1-201ENST00000216727 MIEN1Q9BRT3 115 aa22.12■■□□□ 1.13
PABPN1-201ENST00000216727 C20orf202A1L168 122 aa22.11■■□□□ 1.13
PABPN1-201ENST00000216727 GCN1Q92616 2671 aaKnown RBP22.11■■□□□ 1.13
PABPN1-201ENST00000216727 TSPOP30536 169 aa22.11■■□□□ 1.13
PABPN1-201ENST00000216727 DEFB125Q8N687 156 aa22.11■■□□□ 1.13
PABPN1-201ENST00000216727 C16orf95Q9H693 158 aa22.11■■□□□ 1.13
PABPN1-201ENST00000216727 NXT2Q9NPJ8 142 aaKnown RBP22.11■■□□□ 1.13
PABPN1-201ENST00000216727 M0R381 172 aa22.1■■□□□ 1.13
PABPN1-201ENST00000216727 ANK3Q12955 4377 aaKnown RBP22.09■■□□□ 1.13
PABPN1-201ENST00000216727 CDKN1BP46527 198 aa22.09■■□□□ 1.13
PABPN1-201ENST00000216727 OR2K2Q8NGT1 345 aa22.09■■□□□ 1.13
PABPN1-201ENST00000216727 TRAV9-2A0A087WT02 112 aa22.09■■□□□ 1.13
PABPN1-201ENST00000216727 TRAV12-3A0A0B4J271 114 aa22.09■■□□□ 1.13
PABPN1-201ENST00000216727 PRSS47A8MTI9 375 aa22.09■■□□□ 1.13
PABPN1-201ENST00000216727 NXPH4O95158 308 aa22.09■■□□□ 1.13
PABPN1-201ENST00000216727 ATOH7Q8N100 152 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms