RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 OsmP53347 263 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Gpr135Q7TQP2 457 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Sf3b5Q923D4 86 aaKnown RBP7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 TinagQ9WUR0 475 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Tcrg-V4A0A0B4J1J8 138 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Igkv9-124A0A0G2JDR3 117 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 D430019H16RikJ3QPM6 83 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Gm8653K9J7G2 307 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Vmn1r117L7N2C9 307 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Susd3Q9D176 269 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Ighv1-58A0A075B5W9 117 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Trav3-4A0A075B654 114 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Ighv1-42A0A0A6YY38 117 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Prr19B2RW88 366 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Gm20726G3UX18 150 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Ascl5M0QWB7 188 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Il12rb1Q60837 738 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Prss3Q792Z0 246 aaKnown RBP7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Q8VCE4 163 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Ighv6-4A0A0A6YX19 119 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Gm45785A0A1B0GT05 94 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Tnfaip6O08859 275 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Bet1lO35153 111 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Klf12O35738 402 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 MscO88940 201 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 P01746 140 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Cd5P13379 494 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Mfge8P21956 463 aaKnown RBP7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 9230102O04RikA2ASX7 82 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 ShbgP97497 403 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Mtch2Q791V5 303 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Tmem212Q8C6V3 187 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 9130008F23RikQ9D2Z6 181 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Cldn34c2J3QNM1 233 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Mpc1P63030 109 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Cldn34c1Q8K193 234 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Cxcl14Q9WUQ5 99 aa7.91□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Trav15-2-dv6-2A0A075B650 123 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Rnd3P61588 244 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Plppr1Q8BFZ2 325 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Pxmp4Q9JJW0 212 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Gm11020F6ZGD5 61 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Rnase2O35291 155 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Rab33bO35963 229 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 HrasQ61411 189 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Olfr490Q8VFD2 314 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Olfr482Q8VG03 323 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Olfr982Q8VGB3 321 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Ighv5-9A0A075B5Q2 117 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Olfr978E9Q985 311 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 PpicP30412 212 aaKnown RBP7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Oxgr1Q6IYF8 337 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Cdk2ap2Q9CPY4 127 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 MmdQ9CQY7 238 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Hspb9Q9DAM3 168 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Olfr972Q9EQA2 314 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Trav13n-4A0A0G2JG01 110 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Gabrg3P27681 467 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Rnf122Q8BP31 155 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Vmn1r216Q8R257 298 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Ndufa2Q9CQ75 99 aa7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 Srsf10Q9R0U0 262 aaKnown RBP7.9□□□□□ -1.14
Scn8a-213ENSMUST00000201549 6330409D20RikA2AK85 162 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Foxr2Q3UM89 302 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Gm16503Q8C6M9 103 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Tmem42Q9CR22 157 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Ppp1r27Q9D119 154 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Vmn1r46Q9EQ45 309 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Cxxc4Q6NXI8 198 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Hide1Q75VT8 222 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Kazald1Q8BJ66 313 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Nhlrc1Q8BR37 401 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Lrrc25Q8K1T1 297 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 PyyQ9EPS2 98 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Chst5Q9QUP4 395 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 EsdQ9R0P3 282 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Sumo3Q9Z172 110 aa7.9□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Cacna1aP97445 2368 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 BC053393A0A0B4J1F6 192 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Olfr178E9Q9T3 319 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Lgals9O08573 353 aaKnown RBP7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 GferP56213 198 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Col8a1Q00780 744 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Gpr183Q3U6B2 357 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 SprnQ8BWU1 147 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Trpt1Q8K3A2 249 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Q9DAL9 119 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Defb33Q30KN3 62 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 AdoQ6PDY2 256 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Vmn1r233Q8R294 319 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Olfr1367Q8VFG2 316 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Ighv6-3A0A075B5T2 118 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Igkv4-70A0A0B4J1I5 116 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Gstp1P19157 210 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Gm10775Q3V290 127 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Slc35e4Q8K3D6 351 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Kcne4Q9WTW3 170 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Egr1P08046 533 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Taar4Q5QD15 347 aa7.89□□□□□ -1.15
Scn8a-213ENSMUST00000201549 Cd200r4Q6XJV4 270 aa7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 87.3 ms