RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 FHITP49789 147 aa12.22□□□□□ -0.45
PHGDH-227ENST00000641811 TMEM88Q6PEY1 159 aa12.22□□□□□ -0.45
PHGDH-227ENST00000641811 ARL6IP6Q8N6S5 226 aa12.22□□□□□ -0.45
PHGDH-227ENST00000641811 C11orf72Q8NBR9 251 aa12.22□□□□□ -0.45
PHGDH-227ENST00000641811 TVP23CQ96ET8 276 aa12.22□□□□□ -0.45
PHGDH-227ENST00000641811 ZNF471Q9BX82 626 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-227ENST00000641811 LENEPQ9Y5L5 61 aa12.22□□□□□ -0.45
PHGDH-227ENST00000641811 IGHV1OR15-1A0A075B7D0 117 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 KANTRA0A1W2PQU2 76 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 GAGE12BA1L429 117 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 GAGE7O76087 117 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 TCRAP04437 139 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 GAGE12FP0CL80 117 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 GAGE12GP0CL81 117 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 GAGE12IP0CL82 117 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 UBE2G2P60604 165 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 ANXA2RQ3ZCQ2 193 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 MUC21Q5SSG8 566 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 TMUB2Q71RG4 321 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 C5orf17Q8NAS9 161 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 TMED6Q8WW62 240 aa12.21□□□□□ -0.45
PHGDH-227ENST00000641811 hCG_2014768A0A024R1R8 64 aa12.2□□□□□ -0.46
PHGDH-227ENST00000641811 MAP1LC3B2A6NCE7 125 aa12.2□□□□□ -0.46
PHGDH-227ENST00000641811 F5H768 121 aa12.2□□□□□ -0.46
PHGDH-227ENST00000641811 ATP5G1P05496 136 aa12.2□□□□□ -0.46
PHGDH-227ENST00000641811 ATP5G3P48201 142 aa12.2□□□□□ -0.46
PHGDH-227ENST00000641811 Q6ZTI0 123 aa12.2□□□□□ -0.46
PHGDH-227ENST00000641811 LINC00612Q8N6U2 182 aa12.2□□□□□ -0.46
PHGDH-227ENST00000641811 FAM210BQ96KR6 192 aa12.2□□□□□ -0.46
PHGDH-227ENST00000641811 MAP1LC3BQ9GZQ8 125 aa12.2□□□□□ -0.46
PHGDH-227ENST00000641811 EPDR1Q9UM22 224 aa12.2□□□□□ -0.46
PHGDH-227ENST00000641811 KLF12Q9Y4X4 402 aa12.2□□□□□ -0.46
PHGDH-227ENST00000641811 F6UZH7 168 aa12.19□□□□□ -0.46
PHGDH-227ENST00000641811 PFDN1O60925 122 aa12.19□□□□□ -0.46
PHGDH-227ENST00000641811 DAZ2Q13117 558 aaKnown RBP12.19□□□□□ -0.46
PHGDH-227ENST00000641811 Q6AWC8 147 aa12.19□□□□□ -0.46
PHGDH-227ENST00000641811 TCTE3Q8IZS6 198 aa12.19□□□□□ -0.46
PHGDH-227ENST00000641811 ZNF680Q8NEM1 530 aa12.19□□□□□ -0.46
PHGDH-227ENST00000641811 TREM1Q9NP99 234 aa12.19□□□□□ -0.46
PHGDH-227ENST00000641811 A0A1W2PRE2 83 aa12.18□□□□□ -0.46
PHGDH-227ENST00000641811 SEC11BP0C7V7 166 aa12.18□□□□□ -0.46
PHGDH-227ENST00000641811 IGLV2-11P01706 119 aa12.17□□□□□ -0.46
PHGDH-227ENST00000641811 TCL1AP56279 114 aa12.17□□□□□ -0.46
PHGDH-227ENST00000641811 LGALSLQ3ZCW2 172 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-227ENST00000641811 FAM213BQ8TBF2 198 aa12.17□□□□□ -0.46
PHGDH-227ENST00000641811 LINC00479Q96M42 142 aa12.17□□□□□ -0.46
PHGDH-227ENST00000641811 C8orf49Q96NF6 230 aa12.17□□□□□ -0.46
PHGDH-227ENST00000641811 PSG8Q9UQ74 426 aa12.17□□□□□ -0.46
PHGDH-227ENST00000641811 VPS13DQ5THJ4 4388 aa12.16□□□□□ -0.46
PHGDH-227ENST00000641811 TRGV1A0A0A0MS02 117 aa12.16□□□□□ -0.46
PHGDH-227ENST00000641811 SERTM2A0A1B0GWG4 89 aa12.16□□□□□ -0.46
PHGDH-227ENST00000641811 FAM74A7A6NL05 159 aa12.16□□□□□ -0.46
PHGDH-227ENST00000641811 K7EQM0 130 aa12.16□□□□□ -0.46
PHGDH-227ENST00000641811 IFNA7P01567 189 aa12.16□□□□□ -0.46
PHGDH-227ENST00000641811 CYB561D1Q8N8Q1 229 aa12.16□□□□□ -0.46
PHGDH-227ENST00000641811 MDFICQ9P1T7 246 aa12.16□□□□□ -0.46
PHGDH-227ENST00000641811 NAGKQ9UJ70 344 aa12.16□□□□□ -0.46
PHGDH-227ENST00000641811 TRAV34A0A0B4J273 112 aa12.15□□□□□ -0.46
PHGDH-227ENST00000641811 A0A1B0GV50 99 aa12.15□□□□□ -0.46
PHGDH-227ENST00000641811 HOXA5P20719 270 aa12.15□□□□□ -0.46
PHGDH-227ENST00000641811 FLI1Q01543 452 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-227ENST00000641811 TMEM183BQ1AE95 376 aa12.15□□□□□ -0.46
PHGDH-227ENST00000641811 IBA57Q5T440 356 aaKnown RBP12.15□□□□□ -0.46
PHGDH-227ENST00000641811 FAM159AQ6UWV7 190 aa12.15□□□□□ -0.46
PHGDH-227ENST00000641811 PRNTQ86SH4 94 aa12.15□□□□□ -0.46
PHGDH-227ENST00000641811 TMEM183AQ8IXX5 376 aa12.15□□□□□ -0.46
PHGDH-227ENST00000641811 ATG101Q9BSB4 218 aa12.15□□□□□ -0.46
PHGDH-227ENST00000641811 MRPL16Q9NX20 251 aaKnown RBP12.15□□□□□ -0.46
PHGDH-227ENST00000641811 UMAD1C9J7I0 102 aa12.14□□□□□ -0.47
PHGDH-227ENST00000641811 SPINK4O60575 86 aa12.14□□□□□ -0.47
PHGDH-227ENST00000641811 C1QBP02746 253 aa12.14□□□□□ -0.47
PHGDH-227ENST00000641811 P0DMU3 169 aa12.14□□□□□ -0.47
PHGDH-227ENST00000641811 FAM231AP0DMU4 169 aa12.14□□□□□ -0.47
PHGDH-227ENST00000641811 FAM231CP0DMU5 169 aa12.14□□□□□ -0.47
PHGDH-227ENST00000641811 TPT1P13693 172 aaKnown RBP12.14□□□□□ -0.47
PHGDH-227ENST00000641811 ZNF80P51504 273 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-227ENST00000641811 EIF5AP63241 154 aaKnown RBP12.14□□□□□ -0.47
PHGDH-227ENST00000641811 OR5I1Q13606 314 aa12.14□□□□□ -0.47
PHGDH-227ENST00000641811 STOML3Q8TAV4 291 aa12.14□□□□□ -0.47
PHGDH-227ENST00000641811 SFT2D1Q8WV19 159 aa12.14□□□□□ -0.47
PHGDH-227ENST00000641811 NDFIP1Q9BT67 221 aa12.14□□□□□ -0.47
PHGDH-227ENST00000641811 KMT2AQ03164 3969 aa12.13□□□□□ -0.47
PHGDH-227ENST00000641811 TRGV2A0A075B6R0 118 aa12.13□□□□□ -0.47
PHGDH-227ENST00000641811 TRAV21A0A0B4J279 112 aa12.13□□□□□ -0.47
PHGDH-227ENST00000641811 PEX7O00628 323 aa12.13□□□□□ -0.47
PHGDH-227ENST00000641811 GNRH2O43555 120 aa12.13□□□□□ -0.47
PHGDH-227ENST00000641811 NUDT3O95989 172 aa12.13□□□□□ -0.47
PHGDH-227ENST00000641811 ZNF415Q09FC8 603 aa12.13□□□□□ -0.47
PHGDH-227ENST00000641811 AKAP14Q86UN6 197 aa12.13□□□□□ -0.47
PHGDH-227ENST00000641811 POM121L12Q8N7R1 296 aa12.13□□□□□ -0.47
PHGDH-227ENST00000641811 TMEM75Q8N9X5 138 aa12.13□□□□□ -0.47
PHGDH-227ENST00000641811 MBD3L1Q8WWY6 194 aa12.13□□□□□ -0.47
PHGDH-227ENST00000641811 CST9LP1Q5W188 147 aa12.12□□□□□ -0.47
PHGDH-227ENST00000641811 C15orf53Q8NAA6 179 aa12.12□□□□□ -0.47
PHGDH-227ENST00000641811 C11orf21Q9P2W6 132 aa12.12□□□□□ -0.47
PHGDH-227ENST00000641811 TRAV26-1A0A087WT03 109 aa12.11□□□□□ -0.47
PHGDH-227ENST00000641811 A0A0J9YY99 117 aa12.11□□□□□ -0.47
PHGDH-227ENST00000641811 PAGE4O60829 102 aa12.11□□□□□ -0.47
PHGDH-227ENST00000641811 GCGP01275 180 aa12.11□□□□□ -0.47
PHGDH-227ENST00000641811 TDRG1Q3Y452 100 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms