RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 ORM1P02763 201 aa9.51□□□□□ -0.89
PTPN11-205ENST00000635625 TWIST1Q15672 202 aa9.51□□□□□ -0.89
PTPN11-205ENST00000635625 MRPL51Q4U2R6 128 aaKnown RBP9.51□□□□□ -0.89
PTPN11-205ENST00000635625 LINC01545Q5VT33 79 aa9.51□□□□□ -0.89
PTPN11-205ENST00000635625 TMEM213A2RRL7 107 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 CYSRT1A8MQ03 144 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 HLA-DMBP28068 263 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 PPIFP30405 207 aaKnown RBP9.5□□□□□ -0.89
PTPN11-205ENST00000635625 TSPOP30536 169 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 DPF1Q92782 380 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 ABCA2Q9BZC7 2435 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 ABCA12Q86UK0 2595 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 IGHV3OR16-8A0A075B7F1 116 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 TRBV7-9A0A0J9YWB2 115 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 OVOL1O14753 267 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 CSN3P07498 182 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 CKS2P33552 79 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 CACNG7P62955 275 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 BRD3OSQ6XYD6 125 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 IL17RELQ6ZVW7 336 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 PSMG3-AS1Q96PY0 264 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 ZNF747Q9BV97 191 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 AGPAT4-IT1Q9H0P7 198 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 SIGLEC8Q9NYZ4 499 aa9.5□□□□□ -0.89
PTPN11-205ENST00000635625 IGHV4-30-2A0A087WSY4 118 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 TMEM89A2RUT3 159 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 LINC01546A6NGU7 62 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 PRAC2D3DTV9 90 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 H3BUX3 64 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 J3QLI3 93 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 IGHV4-38-2P0DP08 117 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 IGLL1P15814 213 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 ERCC8Q13216 396 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 PSMG4Q5JS54 123 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 IGFL4Q6B9Z1 124 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 HIST2H2BCQ6DN03 193 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 SMIM15Q7Z3B0 74 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 AMN1Q8IY45 258 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 ATOH7Q8N100 152 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 RNF182Q8N6D2 247 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 C16orf92Q96LL3 132 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 LINC00477Q96M19 166 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 PMCHL2Q9BQD1 86 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 MAP1LC3AQ9H492 121 aa9.49□□□□□ -0.89
PTPN11-205ENST00000635625 IGHV3OR16-10A0A075B7F0 116 aa9.48□□□□□ -0.89
PTPN11-205ENST00000635625 HBDP02042 147 aa9.48□□□□□ -0.89
PTPN11-205ENST00000635625 GAGE1Q13065 139 aa9.48□□□□□ -0.89
PTPN11-205ENST00000635625 NXT2Q9NPJ8 142 aaKnown RBP9.48□□□□□ -0.89
PTPN11-205ENST00000635625 IGHV4-4A0A075B6R2 117 aa9.47□□□□□ -0.89
PTPN11-205ENST00000635625 TCF21O43680 179 aa9.47□□□□□ -0.89
PTPN11-205ENST00000635625 IGLV1-40P01703 118 aa9.47□□□□□ -0.89
PTPN11-205ENST00000635625 IFI27P40305 119 aaPredicted RBP9.47□□□□□ -0.89
PTPN11-205ENST00000635625 A1L4Q6 167 aa9.47□□□□□ -0.89
PTPN11-205ENST00000635625 LGALS9BQ3B8N2 356 aa9.47□□□□□ -0.89
PTPN11-205ENST00000635625 LGALS9CQ6DKI2 356 aa9.47□□□□□ -0.89
PTPN11-205ENST00000635625 LINC00173Q6ZV60 143 aa9.47□□□□□ -0.89
PTPN11-205ENST00000635625 DEFB125Q8N687 156 aa9.47□□□□□ -0.89
PTPN11-205ENST00000635625 CSMD2Q7Z408 3487 aa9.46□□□□□ -0.89
PTPN11-205ENST00000635625 IGHV3-66A0A0C4DH42 116 aa9.46□□□□□ -0.9
PTPN11-205ENST00000635625 SNAI2O43623 268 aa9.46□□□□□ -0.9
PTPN11-205ENST00000635625 MED14OSP0DP75 135 aa9.46□□□□□ -0.9
PTPN11-205ENST00000635625 CFHR3Q02985 330 aa9.46□□□□□ -0.9
PTPN11-205ENST00000635625 PRR31Q5SQ13 230 aa9.46□□□□□ -0.9
PTPN11-205ENST00000635625 SLC25A34Q6PIV7 304 aa9.46□□□□□ -0.9
PTPN11-205ENST00000635625 ZNF575Q86XF7 245 aa9.46□□□□□ -0.9
PTPN11-205ENST00000635625 OR10J6PQ8NGY7 276 aa9.46□□□□□ -0.9
PTPN11-205ENST00000635625 APCP25054 2843 aa9.46□□□□□ -0.9
PTPN11-205ENST00000635625 K7EMT4 169 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 SOCS3O14543 225 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 ZNF207O43670 478 aaKnown RBP9.45□□□□□ -0.9
PTPN11-205ENST00000635625 LY6EQ16553 131 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 MAJINQ3KP22 176 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 LINC01356Q8N9X3 169 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 RNF185Q96GF1 192 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 FBN2P35556 2912 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 IGKV3D-20A0A0C4DH25 116 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 NPYP01303 97 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 PF4V1P10720 104 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 BATFQ16520 125 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 OR4X2Q8NGF9 303 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 OR1N2Q8NGR9 330 aa9.45□□□□□ -0.9
PTPN11-205ENST00000635625 A0A096LNJ9 63 aa9.44□□□□□ -0.9
PTPN11-205ENST00000635625 TRAV21A0A0B4J279 112 aa9.44□□□□□ -0.9
PTPN11-205ENST00000635625 IGHV7-4-1A0A0J9YVY3 117 aa9.44□□□□□ -0.9
PTPN11-205ENST00000635625 PRSS47A8MTI9 375 aa9.44□□□□□ -0.9
PTPN11-205ENST00000635625 SCRT2Q9NQ03 307 aa9.44□□□□□ -0.9
PTPN11-205ENST00000635625 DAZ1Q9NQZ3 744 aaKnown RBP9.44□□□□□ -0.9
PTPN11-205ENST00000635625 IGHV3OR16-13A0A075B7E8 117 aa9.43□□□□□ -0.9
PTPN11-205ENST00000635625 IGHV3-74A0A0B4J1X5 117 aa9.43□□□□□ -0.9
PTPN11-205ENST00000635625 LOC389332A0A1B0GUA5 103 aa9.43□□□□□ -0.9
PTPN11-205ENST00000635625 PRB4P10163 310 aaPredicted RBP9.43□□□□□ -0.9
PTPN11-205ENST00000635625 FOXE3Q13461 319 aa9.43□□□□□ -0.9
PTPN11-205ENST00000635625 APRG1Q8IVJ8 170 aa9.43□□□□□ -0.9
PTPN11-205ENST00000635625 LINC00527Q9UJ94 153 aa9.43□□□□□ -0.9
PTPN11-205ENST00000635625 GOLT1BQ9Y3E0 138 aa9.43□□□□□ -0.9
PTPN11-205ENST00000635625 POLQO75417 2590 aa9.43□□□□□ -0.9
PTPN11-205ENST00000635625 IGHV3-49A0A0A0MS15 119 aa9.42□□□□□ -0.9
PTPN11-205ENST00000635625 DLEU1O43261 78 aa9.42□□□□□ -0.9
PTPN11-205ENST00000635625 FAM106AQ4KMX7 169 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms