RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	LYPD6	Q86Y78	171 aa		3.63	□□□□□ -1.83
SMARCA2-238	ENST00000635273	DEFB125	Q8N687	156 aa		3.63	□□□□□ -1.83
SMARCA2-238	ENST00000635273	TCTEX1D1	Q8N7M0	179 aa		3.63	□□□□□ -1.83
SMARCA2-238	ENST00000635273	CYGB	Q8WWM9	190 aa		3.63	□□□□□ -1.83
SMARCA2-238	ENST00000635273	SEC22C	Q9BRL7	303 aa		3.63	□□□□□ -1.83
SMARCA2-238	ENST00000635273	VCX3B	Q9H321	246 aa		3.63	□□□□□ -1.83
SMARCA2-238	ENST00000635273	PLEKHJ1	Q9NW61	149 aa		3.63	□□□□□ -1.83
SMARCA2-238	ENST00000635273	COA4	Q9NYJ1	87 aa		3.63	□□□□□ -1.83
SMARCA2-238	ENST00000635273	RYR2	Q92736	4967 aa		3.62	□□□□□ -1.83
SMARCA2-238	ENST00000635273	IRGM	A1A4Y4	181 aa		3.62	□□□□□ -1.83
SMARCA2-238	ENST00000635273	SLC22A1	O15245	554 aa		3.62	□□□□□ -1.83
SMARCA2-238	ENST00000635273	ADAP1	O75689	374 aa		3.62	□□□□□ -1.83
SMARCA2-238	ENST00000635273	NAPSA	O96009	420 aa		3.62	□□□□□ -1.83
SMARCA2-238	ENST00000635273	CD7	P09564	240 aa		3.62	□□□□□ -1.83
SMARCA2-238	ENST00000635273	MRPS15	P82914	257 aa	Known RBP	3.62	□□□□□ -1.83
SMARCA2-238	ENST00000635273	ACSM3	Q53FZ2	586 aa		3.62	□□□□□ -1.83
SMARCA2-238	ENST00000635273	AMN1	Q8IY45	258 aa		3.62	□□□□□ -1.83
SMARCA2-238	ENST00000635273	PHB2	Q99623	299 aa		3.62	□□□□□ -1.83
SMARCA2-238	ENST00000635273	WFDC10A	Q9H1F0	79 aa		3.62	□□□□□ -1.83
SMARCA2-238	ENST00000635273	AK3	Q9UIJ7	227 aa		3.62	□□□□□ -1.83
SMARCA2-238	ENST00000635273	DNAH1	Q9P2D7	4330 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	OR11H12	B2RN74	326 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	PPP5D1	E7EU14	171 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273		J3QRK9	145 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	LY6G6C	O95867	125 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	HLA-A	P01891	365 aa	Known RBP	3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	APOA2	P02652	100 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	ORM1	P02763	201 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	PTHLH	P12272	177 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	RHOG	P84095	191 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	MED21	Q13503	144 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	GLT8D1	Q68CQ7	371 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	IDO2	Q6ZQW0	420 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273		Q8N402	240 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	BPIFB6	Q8NFQ5	453 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	TMEM203	Q969S6	136 aa		3.61	□□□□□ -1.83
SMARCA2-238	ENST00000635273	DNAH7	Q8WXX0	4024 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	EFCAB10	A6NFE3	127 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	TMEM250	H0YL14	139 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273		K7ERS5	55 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	PFN1	P07737	140 aa	Known RBP	3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	UBB	P0CG47	229 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	RCVRN	P35243	200 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	CLDN12	P56749	244 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	HLA-DRB3	P79483	266 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	QRFP	P83859	136 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	DEFB114	Q30KQ6	69 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	LINC00322	Q6ZN03	302 aa	Predicted RBP	3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	FAM19A3	Q7Z5A8	133 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	C10orf67	Q8IYJ2	551 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	ZFP82	Q8N141	532 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	DTD1	Q8TEA8	209 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	DYNLRB2	Q8TF09	96 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	ACOT12	Q8WYK0	555 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	MAFIP	Q8WZ33	124 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	ARHGAP5-AS1	Q96IT6	56 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	USMG5	Q96IX5	58 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	CMSS1	Q9BQ75	279 aa	Known RBP	3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	SHANK2-AS3	Q9BTD1	123 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	DCUN1D5	Q9BTE7	237 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	PECR	Q9BY49	303 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	LPAR5	Q9H1C0	372 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	OR2D2	Q9H210	308 aa		3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	ZNF230	Q9UIE0	474 aa	Predicted RBP	3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	RBM7	Q9Y580	266 aa	Known RBP	3.6	□□□□□ -1.83
SMARCA2-238	ENST00000635273	HYDIN	Q4G0P3	5121 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	IGHV3-21	A0A0B4J1V1	117 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	TMEM14DP	A8MWL7	114 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273		H3BUA1	57 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	CRYZL1	O95825	349 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	CBLN1	P23435	193 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	RTL8B	Q17RB0	113 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	KRTAP13-3	Q3SY46	172 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	HSD17B12	Q53GQ0	312 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	C10orf55	Q5SWW7	151 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	PRR9	Q5T870	116 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	LAIR2	Q6ISS4	152 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	TMEM136	Q6ZRR5	245 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	OR10J5	Q8NHC4	309 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	NAGK	Q9UJ70	344 aa		3.59	□□□□□ -1.83
SMARCA2-238	ENST00000635273	BIRC6	Q9NR09	4857 aa		3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	IGKV1OR2-108	A0A075B7D4	117 aa		3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	SPRR5	A0A1B0GTR4	108 aa		3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	C2orf70	A6NJV1	201 aa		3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	DENR	O43583	198 aa	Known RBP	3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	S100A2	P29034	98 aa		3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	HSPA13	P48723	471 aa		3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	VMA21	Q3ZAQ7	101 aa		3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	TMEM91	Q6ZNR0	172 aa		3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	C8orf59	Q8N0T1	100 aa	Predicted RBP	3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	RPP25L	Q8N5L8	163 aa	Known RBP	3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	GINS4	Q9BRT9	223 aa		3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	ZNF586	Q9NXT0	402 aa		3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	STARD9	Q9P2P6	4700 aa		3.58	□□□□□ -1.84
SMARCA2-238	ENST00000635273	TRBV6-7	A0A0A0MS04	114 aa		3.57	□□□□□ -1.84
SMARCA2-238	ENST00000635273	FAM223B	A6NKX1	122 aa		3.57	□□□□□ -1.84
SMARCA2-238	ENST00000635273		E7EUB6	86 aa		3.57	□□□□□ -1.84
SMARCA2-238	ENST00000635273	GGCT	O75223	188 aa	Known RBP	3.57	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms