RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 SSR3Q9UNL2 185 aa-0.55□□□□□ -2.5
SRP54-214ENST00000630962 ARL2BPQ9Y2Y0 163 aa-0.55□□□□□ -2.5
SRP54-214ENST00000630962 LAMC3Q9Y6N6 1575 aa-0.55□□□□□ -2.5
SRP54-214ENST00000630962 PLB1Q6P1J6 1458 aa-0.55□□□□□ -2.5
SRP54-214ENST00000630962 CDK12Q9NYV4 1490 aaPredicted RBP-0.55□□□□□ -2.5
SRP54-214ENST00000630962 KIAA1107Q9UPP5 1409 aa-0.55□□□□□ -2.5
SRP54-214ENST00000630962 MED13LQ71F56 2210 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 TENM2Q9NT68 2774 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 PCF11O94913 1555 aaKnown RBP-0.56□□□□□ -2.5
SRP54-214ENST00000630962 PTPRQQ9UMZ3 2332 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 MYCBP2O75592 4640 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 H7BYZ3 331 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 KPNA4O00629 521 aaPredicted RBP-0.56□□□□□ -2.5
SRP54-214ENST00000630962 CST2P09228 141 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 BCL2P10415 239 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 RTL8BQ17RB0 113 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 KRTAP19-7Q3SYF9 63 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 LYPD5Q6UWN5 251 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 DGCR14Q96DF8 476 aaKnown RBP-0.56□□□□□ -2.5
SRP54-214ENST00000630962 MCEEQ96PE7 176 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 RTL8AQ9BWD3 113 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 TAF9BQ9HBM6 251 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 ARMC1Q9NVT9 282 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 PRNDQ9UKY0 176 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 PYCARDQ9ULZ3 195 aa-0.56□□□□□ -2.5
SRP54-214ENST00000630962 TNS1Q9HBL0 1735 aaKnown RBP-0.56□□□□□ -2.5
SRP54-214ENST00000630962 ANKRD17O75179 2603 aaKnown RBP-0.56□□□□□ -2.5
SRP54-214ENST00000630962 PDZD2O15018 2839 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 MCRIP1C9JLW8 97 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 EDF1O60869 148 aaKnown RBP-0.57□□□□□ -2.5
SRP54-214ENST00000630962 NIPSNAP2O75323 286 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 FABP2P12104 132 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 TPT1P13693 172 aaKnown RBP-0.57□□□□□ -2.5
SRP54-214ENST00000630962 SPRR2DP22532 72 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 DNAJB13P59910 316 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 AKR1C8PQ5T2L2 129 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 Q5XG85 94 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 PHF5AQ7RTV0 110 aaKnown RBP-0.57□□□□□ -2.5
SRP54-214ENST00000630962 OR5H6Q8NGV6 325 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 CCL4L1Q8NHW4 92 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 DMAC1Q96GE9 116 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 PRAP1Q96NZ9 151 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 BPESC1Q9GZL8 116 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 ATG5Q9H1Y0 275 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 FKBP11Q9NYL4 201 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 SS18L2Q9UHA2 77 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 AKAP6Q13023 2319 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 USP54Q70EL1 1684 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 MAP2P11137 1827 aaKnown RBP-0.57□□□□□ -2.5
SRP54-214ENST00000630962 CPDO75976 1380 aa-0.57□□□□□ -2.5
SRP54-214ENST00000630962 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.58□□□□□ -2.5
SRP54-214ENST00000630962 DOPEY2Q9Y3R5 2298 aa-0.58□□□□□ -2.5
SRP54-214ENST00000630962 LPAP08519 4548 aa-0.58□□□□□ -2.5
SRP54-214ENST00000630962 F5P12259 2224 aa-0.58□□□□□ -2.5
SRP54-214ENST00000630962 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.58□□□□□ -2.5
SRP54-214ENST00000630962 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.58□□□□□ -2.5
SRP54-214ENST00000630962 TMEM189A5PLL7 270 aa-0.58□□□□□ -2.5
SRP54-214ENST00000630962 ATG12O94817 140 aa-0.58□□□□□ -2.5
SRP54-214ENST00000630962 CCKP06307 115 aa-0.58□□□□□ -2.5
SRP54-214ENST00000630962 GTF2A1P52655 376 aaPredicted RBP-0.58□□□□□ -2.5
SRP54-214ENST00000630962 UNQ5815/PRO19632Q6UWF5 114 aa-0.58□□□□□ -2.5
SRP54-214ENST00000630962 DIRC1Q969H9 104 aa-0.58□□□□□ -2.5
SRP54-214ENST00000630962 BORCS8Q96FH0 119 aa-0.58□□□□□ -2.5
SRP54-214ENST00000630962 TMEM141Q96I45 108 aa-0.58□□□□□ -2.5
SRP54-214ENST00000630962 LYRM2Q9NU23 88 aaPredicted RBP-0.58□□□□□ -2.5
SRP54-214ENST00000630962 COA4Q9NYJ1 87 aa-0.58□□□□□ -2.5
SRP54-214ENST00000630962 BLMP54132 1417 aaPredicted RBP-0.58□□□□□ -2.5
SRP54-214ENST00000630962 NINQ8N4C6 2090 aa-0.58□□□□□ -2.5
SRP54-214ENST00000630962 H3BQV1 296 aa-0.59□□□□□ -2.5
SRP54-214ENST00000630962 GLRXP35754 106 aa-0.59□□□□□ -2.5
SRP54-214ENST00000630962 MAXP61244 160 aa-0.59□□□□□ -2.5
SRP54-214ENST00000630962 ARF6P62330 175 aa-0.59□□□□□ -2.5
SRP54-214ENST00000630962 RHOHQ15669 191 aa-0.59□□□□□ -2.5
SRP54-214ENST00000630962 OTORQ9NRC9 128 aa-0.59□□□□□ -2.5
SRP54-214ENST00000630962 MPC1Q9Y5U8 109 aa-0.59□□□□□ -2.5
SRP54-214ENST00000630962 CSMD3Q7Z407 3707 aa-0.59□□□□□ -2.5
SRP54-214ENST00000630962 SPAG17Q6Q759 2223 aa-0.6□□□□□ -2.5
SRP54-214ENST00000630962 DLEC1Q9Y238 1755 aa-0.6□□□□□ -2.5
SRP54-214ENST00000630962 HECTD4Q9Y4D8 3996 aa-0.6□□□□□ -2.51
SRP54-214ENST00000630962 LOC107986453A0A1B0GWG9 222 aa-0.6□□□□□ -2.51
SRP54-214ENST00000630962 CSN2P05814 226 aa-0.6□□□□□ -2.51
SRP54-214ENST00000630962 SAA1P0DJI8 122 aaPredicted RBP-0.6□□□□□ -2.51
SRP54-214ENST00000630962 SDC4P31431 198 aa-0.6□□□□□ -2.51
SRP54-214ENST00000630962 OR5A2Q8NGI9 324 aa-0.6□□□□□ -2.51
SRP54-214ENST00000630962 CEP19Q96LK0 163 aa-0.6□□□□□ -2.51
SRP54-214ENST00000630962 PRELID3AQ96N28 172 aa-0.6□□□□□ -2.51
SRP54-214ENST00000630962 SMIM7Q9BQ49 75 aa-0.6□□□□□ -2.51
SRP54-214ENST00000630962 C19orf12Q9NSK7 152 aa-0.6□□□□□ -2.51
SRP54-214ENST00000630962 CDK13Q14004 1512 aaKnown RBP-0.6□□□□□ -2.51
SRP54-214ENST00000630962 DLC1Q96QB1 1528 aa-0.6□□□□□ -2.51
SRP54-214ENST00000630962 COL6A3P12111 3177 aa-0.6□□□□□ -2.51
SRP54-214ENST00000630962 MAP1AP78559 2803 aaPredicted RBP-0.6□□□□□ -2.51
SRP54-214ENST00000630962 TNXBP22105 4242 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 GVQW2A0A096LPI5 108 aaPredicted RBP-0.61□□□□□ -2.51
SRP54-214ENST00000630962 IFITM5A6NNB3 132 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 ZNF670-ZNF695F2Z2N8 137 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 APODP05090 189 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 PYYP10082 97 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 ERVS71-1P61550 626 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 LTC4SQ16873 150 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms